Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_032227 Daucus carota HOM05D003723 ORTHO05D004306 2.0e-231 805.4 425 100.0
DCAR_004814 Daucus carota HOM05D003723 ORTHO05D004306 2.4e-216 755.4 461 88.7
DCAR_012822 Daucus carota HOM05D003723 ORTHO05D004306 1.7e-153 546.6 446 64.3
Manes.02G183600 Manihot esculenta HOM05D003723 ORTHO05D004306 2.0e-141 506.5 456 59.9
CiPaw.08G050900 Carya illinoinensis HOM05D003723 ORTHO05D004306 7.7e-138 494.6 455 58.2
Cpa.g.sc142.42 Carica papaya HOM05D003723 ORTHO05D004306 1.1e-136 490.7 460 57.6
Prupe.1G421300 Prunus persica HOM05D003723 ORTHO05D004306 1.1e-136 490.7 453 57.6
CSS0010741 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 3.2e-136 489.2 455 57.1
CSS0046104 Camellia sinensis var. sinensis HOM05D003723 ORTHO05D004306 3.2e-136 489.2 455 57.1
Manes.18G095200 Manihot esculenta HOM05D003723 ORTHO05D004306 3.2e-136 489.2 456 57.9
Dinv44943 Davidia involucrata HOM05D003723 ORTHO05D004306 4.2e-136 488.8 454 58.4
Cfa013762 Carpinus fangiana HOM05D003723 ORTHO05D004306 5.5e-136 488.4 455 57.1
Ciclev10000301m.g Citrus clementina HOM05D003723 ORTHO05D004306 2.7e-135 486.1 456 57.5
MD08G1080300 Malus domestica HOM05D003723 ORTHO05D004306 4.7e-135 485.3 453 57.2
MD15G1067400 Malus domestica HOM05D003723 ORTHO05D004306 4.7e-135 485.3 453 57.2
QL12p038269 Quercus lobata HOM05D003723 ORTHO05D004306 4.7e-135 485.3 456 57.2
QL93p0154_0009 Quercus lobata HOM05D003723 ORTHO05D004306 4.7e-135 485.3 456 57.2
Potri.002G117500 Populus trichocarpa HOM05D003723 ORTHO05D004306 1.4e-134 483.8 457 56.2
TWI56G1015 Tripterygium wilfordii HOM05D003723 ORTHO05D004306 2.3e-134 483.0 456 56.4
Lj4C72T17 Lonicera japonica HOM05D003723 ORTHO05D004306 3.0e-134 482.6 455 57.4
Haze_22418 Corylus avellana HOM05D003723 ORTHO05D004306 3.9e-134 482.3 462 56.7
CiPaw.07G173600 Carya illinoinensis HOM05D003723 ORTHO05D004306 5.2e-134 481.9 455 56.9
Potri.014G014900 Populus trichocarpa HOM05D003723 ORTHO05D004306 1.1e-133 480.7 457 56.7
Sabra02G0092000 Salix brachista HOM05D003723 ORTHO05D004306 3.3e-133 479.2 457 56.5
TAR628G0363 Trochodendron aralioides HOM05D003723 ORTHO05D004306 3.3e-133 479.2 454 57.3
DCAR_009874 Daucus carota HOM05D003723 ORTHO05D004306 4.4e-133 478.8 462 55.6
ECA247G0551 Erigeron canadensis HOM05D003723 ORTHO05D004306 4.4e-133 478.8 450 57.1
CANSAT25G0987 Cannabis sativa HOM05D003723 ORTHO05D004306 3.7e-132 475.7 448 56.9
Eucgr.F02239 Eucalyptus grandis HOM05D003723 ORTHO05D004306 6.3e-132 474.9 452 56.2
Lj4A757T32 Lonicera japonica HOM05D003723 ORTHO05D004306 6.3e-132 474.9 455 56.3
PGR031G2627 Punica granatum HOM05D003723 ORTHO05D004306 8.2e-132 474.6 452 56.0
Sabra14G0008900 Salix brachista HOM05D003723 ORTHO05D004306 2.4e-131 473.0 457 55.8
PSO541G5768 Papaver somniferum HOM05D003723 ORTHO05D004306 4.1e-131 472.2 454 55.7
Atru.chr13.849 Acer truncatum HOM05D003723 ORTHO05D004306 1.2e-130 470.7 473 55.2
HanXRQChr10g0292141 Helianthus annuus HOM05D003723 ORTHO05D004306 1.3e-129 467.2 447 57.0
vmacro16900 Vaccinium macrocarpon HOM05D003723 ORTHO05D004306 3.2e-128 462.6 455 54.5
PGSC0003DMG400011543 Solanum tuberosum HOM05D003723 ORTHO05D004306 4.2e-128 462.2 455 54.9
TWI12G0955 Tripterygium wilfordii HOM05D003723 ORTHO05D004306 4.2e-128 462.2 457 54.0
AL6G41310 Arabidopsis lyrata HOM05D003723 ORTHO05D004306 5.5e-128 461.8 451 55.7
BraA03t12004Z Brassica rapa HOM05D003723 ORTHO05D004306 7.2e-128 461.5 439 56.0
Cc10_g05060 Coffea canephora HOM05D003723 ORTHO05D004306 1.6e-127 460.3 461 55.1
AT4G07410 Arabidopsis thaliana HOM05D003723 ORTHO05D004306 2.7e-127 459.5 453 55.2
CsaV3_4G035140 Cucumis sativus L. HOM05D003723 ORTHO05D004306 2.7e-127 459.5 453 54.1
Sed0028163 Sechium edule HOM05D003723 ORTHO05D004306 2.7e-127 459.5 450 54.4
MELO3C016827.2 Cucumis melo HOM05D003723 ORTHO05D004306 6.1e-127 458.4 453 54.1
CARHR287080 Cardamine hirsuta HOM05D003723 ORTHO05D004306 1.0e-126 457.6 442 55.7
A03p27910 Brassica napus HOM05D003723 ORTHO05D004306 2.3e-126 456.4 439 56.0
Nitab4.5_0003725g0010 Nicotiana tabacum HOM05D003723 ORTHO05D004306 2.3e-126 456.4 457 54.0
MSTRG.24381 Avicennia marina HOM05D003723 ORTHO05D004306 3.0e-126 456.1 459 53.8
C03p33700 Brassica napus HOM05D003723 ORTHO05D004306 6.7e-126 454.9 442 55.4
BolC3t15689H Brassica oleracea HOM05D003723 ORTHO05D004306 6.7e-126 454.9 442 55.4
Nitab4.5_0009040g0020 Nicotiana tabacum HOM05D003723 ORTHO05D004306 6.7e-126 454.9 454 54.4
BcaB01g02881 Brassica carinata HOM05D003723 ORTHO05D004306 2.0e-125 453.4 445 54.8
AUR62022465 Chenopodium quinoa HOM05D003723 ORTHO05D004306 2.6e-125 453.0 453 55.0
SalBow2G1921 Salvia bowleyana HOM05D003723 ORTHO05D004306 2.6e-125 453.0 476 52.3
Gohir.A10G151900 Gossypium hirsutum HOM05D003723 ORTHO05D004306 3.3e-125 452.6 461 54.9
Carub.0006s2652 Capsella rubella HOM05D003723 ORTHO05D004306 5.7e-125 451.8 458 53.7
HanXRQChr10g0292161 Helianthus annuus HOM05D003723 ORTHO05D004306 5.7e-125 451.8 447 56.4
Thhalv10028433m.g Eutrema salsugineum HOM05D003723 ORTHO05D004306 7.5e-125 451.4 456 53.3
Duzib151G0173 Durio zibethinus HOM05D003723 ORTHO05D004306 9.7e-125 451.1 458 55.5
ClCG05G020690 Citrullus lanatus HOM05D003723 ORTHO05D004306 1.3e-124 450.7 457 54.0
SGA_v2.0_scaffold28G11839 Striga asiatica HOM05D003723 ORTHO05D004306 1.3e-124 450.7 460 53.5
Lalb_Chr22g0355711 Lupinus albus HOM05D003723 ORTHO05D004306 2.8e-124 449.5 456 54.6
Sopen12g030290 Solanum pennellii HOM05D003723 ORTHO05D004306 2.8e-124 449.5 455 53.8
BcaC05g26751 Brassica carinata HOM05D003723 ORTHO05D004306 3.7e-124 449.1 441 55.1
Gohir.D10G114400 Gossypium hirsutum HOM05D003723 ORTHO05D004306 3.7e-124 449.1 461 54.7
AUR62043254 Chenopodium quinoa HOM05D003723 ORTHO05D004306 6.3e-124 448.4 454 55.1
Oeu014279.1 Olea europaea HOM05D003723 ORTHO05D004306 6.3e-124 448.4 459 54.2
Gohir.A02G089200 Gossypium hirsutum HOM05D003723 ORTHO05D004306 8.2e-124 448.0 458 54.8
Lj5g0007294 Lotus japonicus HOM05D003723 ORTHO05D004306 1.1e-123 447.6 454 54.2
Sc02g0007980 Simmondsia chinensis HOM05D003723 ORTHO05D004306 1.1e-123 447.6 456 52.9
BcaC01g04785 Brassica carinata HOM05D003723 ORTHO05D004306 1.4e-123 447.2 442 54.5
Nitab4.5_0000497g0070 Nicotiana tabacum HOM05D003723 ORTHO05D004306 1.4e-123 447.2 457 53.2
Sp6g10450 Schrenkiella parvula HOM05D003723 ORTHO05D004306 1.4e-123 447.2 455 53.6
Solyc12g088290.2 Solanum lycopersicum HOM05D003723 ORTHO05D004306 2.4e-123 446.4 455 53.2
Lalb_Chr14g0368121 Lupinus albus HOM05D003723 ORTHO05D004306 3.1e-123 446.0 459 53.2
Thecc.04G063000 Theobroma cacao HOM05D003723 ORTHO05D004306 5.3e-123 445.3 459 55.6
Nitab4.5_0002314g0030 Nicotiana tabacum HOM05D003723 ORTHO05D004306 7.0e-123 444.9 454 54.0
PSO017G5808 Papaver somniferum HOM05D003723 ORTHO05D004306 9.1e-123 444.5 451 53.4
AT1G27470 Arabidopsis thaliana HOM05D003723 ORTHO05D004306 1.2e-122 444.1 452 54.6
AL1G40900 Arabidopsis lyrata HOM05D003723 ORTHO05D004306 1.6e-122 443.7 452 54.6
Gorai.011G126100 Gossypium raimondii HOM05D003723 ORTHO05D004306 1.6e-122 443.7 461 54.4
Hund05292 Selenicereus undatus HOM05D003723 ORTHO05D004306 2.0e-122 443.4 458 53.3
arahy.Tifrunner.gnm1.ann1.82WHW6 Arachis hypogaea HOM05D003723 ORTHO05D004306 4.5e-122 442.2 455 53.4
PGSC0003DMG401010623 Solanum tuberosum HOM05D003723 ORTHO05D004306 5.9e-122 441.8 455 53.0
Peaxi162Scf00081g02729 Petunia axillaris HOM05D003723 ORTHO05D004306 7.7e-122 441.4 480 50.4
Aa31sc622G20 Aethionema arabicum HOM05D003723 ORTHO05D004306 1.3e-121 440.7 457 52.5
BolC5t31333H Brassica oleracea HOM05D003723 ORTHO05D004306 1.3e-121 440.7 445 54.6
A09p38510 Brassica napus HOM05D003723 ORTHO05D004306 1.7e-121 440.3 446 53.8
BraA09t39357Z Brassica rapa HOM05D003723 ORTHO05D004306 1.7e-121 440.3 446 53.8
Thhalv10006817m.g Eutrema salsugineum HOM05D003723 ORTHO05D004306 2.2e-121 439.9 452 53.3
Solyc04g077680.3 Solanum lycopersicum HOM05D003723 ORTHO05D004306 2.2e-121 439.9 455 52.3
GSVIVG01009321001 Vitis vinifera HOM05D003723 ORTHO05D004306 2.2e-121 439.9 393 61.1
Aqoxy3G00456 Aquilegia oxysepala HOM05D003723 ORTHO05D004306 2.9e-121 439.5 449 54.6
Glyma.14G089042 Glycine max HOM05D003723 ORTHO05D004306 2.9e-121 439.5 449 52.3
Sopen04g031320 Solanum pennellii HOM05D003723 ORTHO05D004306 6.5e-121 438.3 455 52.3
BcaC05g26567 Brassica carinata HOM05D003723 ORTHO05D004306 8.5e-121 438.0 445 54.2
C05p26190 Brassica napus HOM05D003723 ORTHO05D004306 8.5e-121 438.0 445 54.2
Sp1g23720 Schrenkiella parvula HOM05D003723 ORTHO05D004306 1.1e-120 437.6 450 53.1
Carub.0001s2603 Capsella rubella HOM05D003723 ORTHO05D004306 9.4e-120 434.5 452 53.3
RcHm_v2.0_Chr6g0309831 Rosa chinensis HOM05D003723 ORTHO05D004306 9.4e-120 434.5 448 54.0
BcaC01g06947 Brassica carinata HOM05D003723 ORTHO05D004306 2.7e-119 433.0 444 54.1
Lsat_1_v5_gn_1_1120 Lactuca sativa HOM05D003723 ORTHO05D004306 4.7e-119 432.2 475 52.8
THA.LOC104824968 Tarenaya hassleriana HOM05D003723 ORTHO05D004306 4.7e-119 432.2 460 51.5
THA.LOC104825785 Tarenaya hassleriana HOM05D003723 ORTHO05D004306 4.7e-119 432.2 452 52.0
BraA08t34575Z Brassica rapa HOM05D003723 ORTHO05D004306 1.8e-118 430.3 445 53.7
Gohir.D02G112100 Gossypium hirsutum HOM05D003723 ORTHO05D004306 1.8e-118 430.3 459 54.0
BcaC01g01603 Brassica carinata HOM05D003723 ORTHO05D004306 3.0e-118 429.5 445 53.3
FAN15G1506 Fragaria x ananassa HOM05D003723 ORTHO05D004306 4.0e-118 429.1 448 53.1
FvH4_2g32880 Fragaria vesca HOM05D003723 ORTHO05D004306 5.2e-118 428.7 448 53.1
FAN24G1723 Fragaria x ananassa HOM05D003723 ORTHO05D004306 5.2e-118 428.7 448 53.1
CDE07G0463 Ceratophyllum demersum HOM05D003723 ORTHO05D004306 8.8e-118 427.9 457 51.2
FAN27G2988 Fragaria x ananassa HOM05D003723 ORTHO05D004306 8.8e-118 427.9 448 53.1
Ah.05g167030 Amaranthus hybridus HOM05D003723 ORTHO05D004306 1.2e-117 427.6 455 51.9
A08p26240 Brassica napus HOM05D003723 ORTHO05D004306 2.0e-117 426.8 445 53.0
CARHR027080 Cardamine hirsuta HOM05D003723 ORTHO05D004306 2.6e-117 426.4 450 52.4
EL10Ac1g02364 Beta vulgaris HOM05D003723 ORTHO05D004306 4.4e-117 425.6 458 50.4
BolC3t19677H Brassica oleracea HOM05D003723 ORTHO05D004306 9.8e-117 424.5 445 53.0
FAN20G3047 Fragaria x ananassa HOM05D003723 ORTHO05D004306 2.2e-116 423.3 448 52.5
C03p74200 Brassica napus HOM05D003723 ORTHO05D004306 2.8e-116 422.9 445 52.8
Glyma.17G233900 Glycine max HOM05D003723 ORTHO05D004306 2.8e-116 422.9 452 52.2
Aa31LG7G10210 Aethionema arabicum HOM05D003723 ORTHO05D004306 3.7e-116 422.5 448 52.0
Gorai.005G127000 Gossypium raimondii HOM05D003723 ORTHO05D004306 8.3e-116 421.4 486 50.8
Zm00001eb215430 Zea mays HOM05D003723 ORTHO05D004306 1.2e-114 417.5 455 51.2
Zm00001eb056350 Zea mays HOM05D003723 ORTHO05D004306 4.5e-114 415.6 455 50.1
Peaxi162Scf00160g00521 Petunia axillaris HOM05D003723 ORTHO05D004306 7.7e-114 414.8 433 53.6
Phvul.001G028900 Phaseolus vulgaris HOM05D003723 ORTHO05D004306 1.3e-113 414.1 453 50.6
arahy.Tifrunner.gnm1.ann1.YU9IEB Arachis hypogaea HOM05D003723 ORTHO05D004306 3.8e-113 412.5 455 51.4
VMungo0647G0070 Vigna mungo HOM05D003723 ORTHO05D004306 2.5e-112 409.8 457 49.7
Os03g0735100 Oryza sativa ssp. japonica HOM05D003723 ORTHO05D004306 4.2e-112 409.1 453 51.4
CDE04G2329 Ceratophyllum demersum HOM05D003723 ORTHO05D004306 5.5e-112 408.7 443 51.0
HPP92_003353 Vanilla planifolia HOM05D003723 ORTHO05D004306 1.7e-108 397.1 455 48.8
COL.COLO4_29256 Corchorus olitorius HOM05D003723 ORTHO05D004306 2.8e-108 396.4 416 53.6
Psat6g017680 Pisum sativum HOM05D003723 ORTHO05D004306 5.4e-107 392.1 460 50.2
Hma1.2p1_0210F.1_g089420 Hydrangea macrophylla HOM05D003723 ORTHO05D004306 1.6e-106 390.6 403 54.6
Ca_23258_v3 Cicer arietinum L. HOM05D003723 ORTHO05D004306 3.3e-104 382.9 444 49.3
ATR0739G177 Amborella trichopoda HOM05D003723 ORTHO05D004306 4.3e-104 382.5 458 48.7
TPR.G12983 Trifolium pratense HOM05D003723 ORTHO05D004306 1.6e-103 380.6 463 48.6
Ca_13209_v3 Cicer arietinum L. HOM05D003723 ORTHO05D004306 2.1e-103 380.2 458 47.2
Medtr8g014080 Medicago truncatula HOM05D003723 ORTHO05D004306 1.4e-99 367.5 446 49.1
Mapoly0027s0127 Marchantia polymorpha HOM05D003723 ORTHO05D004306 1.2e-95 354.4 458 42.6
TPR.G32238 Trifolium pratense HOM05D003723 ORTHO05D004306 1.6e-95 354.0 444 47.7
SGA_v2.0_scaffold152G36813 Striga asiatica HOM05D003723 ORTHO05D004306 4.0e-94 349.4 460 44.3
Oeu036976.1 Olea europaea HOM05D003723 ORTHO05D004306 8.9e-94 348.2 318 58.8
AagrBONN_evm.TU.Sc2ySwM_344.864 Anthoceros agrestis HOM05D003723 ORTHO05D004306 9.2e-91 338.2 448 41.3
Sed0011873 Sechium edule HOM05D003723 ORTHO05D004306 7.8e-90 335.1 311 57.6
unitig_0.g1045 Utricularia gibba HOM05D003723 ORTHO05D004306 3.0e-89 333.2 445 44.0
Medtr1g017880 Medicago truncatula HOM05D003723 ORTHO05D004306 6.6e-89 332.0 457 44.4
Actinidia10210 Actinidia chinensis HOM05D003723 ORTHO05D004306 6.4e-84 315.5 263 62.0
SMO367G0860 Selaginella moellendorffii HOM05D003723 ORTHO05D004306 2.4e-83 313.5 426 42.3
Actinidia19301 Actinidia chinensis HOM05D003723 ORTHO05D004306 1.3e-81 307.8 294 56.8
Pp3c22_14490 Physcomitrium patens HOM05D003723 ORTHO05D004306 1.2e-79 301.2 456 41.0
Pp3c19_13580 Physcomitrium patens HOM05D003723 ORTHO05D004306 5.8e-77 292.4 457 40.3
SEGI_10786 Sequoiadendron giganteum HOM05D003723 ORTHO05D004306 6.6e-73 278.9 304 49.0
Lsat_1_v5_gn_1_440 Lactuca sativa HOM05D003723 ORTHO05D004306 5.3e-70 269.2 254 57.1
CBR_g57871 Chara braunii HOM05D003723 ORTHO05D004306 4.4e-69 266.2 461 38.0
Dinv39213 Davidia involucrata HOM05D003723 ORTHO05D004306 5.6e-64 249.2 157 75.8
Oeu053086.3 Olea europaea HOM05D003723 ORTHO05D004306 2.1e-55 220.7 253 53.8
TAR376G0468 Trochodendron aralioides HOM05D003723 ORTHO05D004306 3.5e-42 176.8 131 71.0
HanXRQChr14g0443971 Helianthus annuus HOM05D003723 ORTHO05D004306 8.7e-41 172.2 169 55.6
MCO10G249 Micromonas commoda HOM05D003723 ORTHO05D004306 2.4e-38 164.1 331 33.2
Cre13.g606850 Chlamydomonas reinhardtii HOM05D003723 ORTHO05D004306 1.5e-32 144.8 314 32.5
TAR376G0365 Trochodendron aralioides HOM05D003723 ORTHO05D004306 1.3e-31 141.7 99 66.7
PRCOL_00004412 Prasinoderma coloniale HOM05D003723 ORTHO05D004306 1.5e-29 134.8 342 31.6
Migut.N02791 Erythranthe guttata HOM05D003723 ORTHO05D004306 2.0e-29 134.4 101 66.3
Zm00001eb382220 Zea mays HOM05D002544 ORTHO05D007856 2.6e-29 134.0 196 42.9
Cfa027112 Carpinus fangiana HOM05D003723 ORTHO05D004306 5.9e-29 132.9 334 30.5
Zm00001eb280470 Zea mays HOM05D003723 ORTHO05D004306 6.5e-28 129.4 203 42.9
Pp3c18_6690 Physcomitrium patens HOM05D003723 ORTHO05D004306 8.5e-28 129.0 220 37.3
Psat7g031120 Pisum sativum HOM05D003723 ORTHO05D004306 2.9e-20 104.0 89 62.9
CAN.G400.11 Capsicum annuum HOM05D002670 ORTHO05D000002 1.0e-09 68.9 134 36.6
SEGI_24646 Sequoiadendron giganteum HOM05D003723 ORTHO05D004306 1.5e-08 65.1 120 35.0
MCO11G464 Micromonas commoda HOM05D005961 ORTHO05D034408 4.8e-07 60.1 115 33.0
CBR_g32567 Chara braunii HOM05D001315 ORTHO05D009137 8.3e-07 59.3 139 30.9
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 5.3e-06 56.6 133 28.6


User provided reference genes

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