Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_031355 Daucus carota HOM05D000724 ORTHO05D011443 8.4e-21 102.8 55 100.0
DCAR_027865 Daucus carota HOM05D000724 ORTHO05D000755 3.9e-10 67.4 55 74.5
arahy.Tifrunner.gnm1.ann1.D1T9JW Arachis hypogaea HOM05D003281 ORTHO05D011443 1.3e-08 62.4 44 72.7
Cc09_g08040 Coffea canephora HOM05D000724 ORTHO05D000755 1.6e-08 62.0 55 70.9
Dinv07811 Davidia involucrata HOM05D000724 ORTHO05D000755 6.3e-08 60.1 35 88.6
Lj1A1162T42 Lonicera japonica HOM05D000724 ORTHO05D000755 6.3e-08 60.1 35 88.6
MSTRG.13269 Avicennia marina HOM05D000724 ORTHO05D000755 8.2e-08 59.7 55 67.3
DCAR_003857 Daucus carota HOM05D000724 ORTHO05D000755 8.2e-08 59.7 35 85.7
DCAR_007844 Daucus carota HOM05D000724 ORTHO05D000755 8.2e-08 59.7 35 85.7
SalBow8G4875 Salvia bowleyana HOM05D000724 ORTHO05D000755 8.2e-08 59.7 55 67.3
SGA_v2.0_scaffold223G42862 Striga asiatica HOM05D000724 ORTHO05D000755 8.2e-08 59.7 55 67.3
Nitab4.5_0001298g0010 Nicotiana tabacum HOM05D000724 ORTHO05D000755 1.1e-07 59.3 35 88.6
Nitab4.5_0002301g0020 Nicotiana tabacum HOM05D000724 ORTHO05D000755 1.1e-07 59.3 35 88.6
Peaxi162Scf00267g00059 Petunia axillaris HOM05D000724 ORTHO05D000755 1.1e-07 59.3 35 88.6
Solyc02g024070.3 Solanum lycopersicum HOM05D000724 ORTHO05D000755 1.1e-07 59.3 35 88.6
Sopen02g006800 Solanum pennellii HOM05D000724 ORTHO05D000755 1.1e-07 59.3 35 88.6
PGSC0003DMG400011810 Solanum tuberosum HOM05D000724 ORTHO05D000755 1.1e-07 59.3 35 88.6
MSTRG.7537 Avicennia marina HOM05D000724 ORTHO05D000755 1.4e-07 58.9 34 91.2
CSS0009114 Camellia sinensis var. sinensis HOM05D000724 ORTHO05D000755 1.4e-07 58.9 35 85.7
CiPaw.10G085700 Carya illinoinensis HOM05D000724 ORTHO05D000755 1.8e-07 58.5 55 65.5
Migut.H01331 Erythranthe guttata HOM05D000724 ORTHO05D000755 1.8e-07 58.5 55 61.8
Lalb_Chr20g0120041 Lupinus albus HOM05D000724 ORTHO05D000755 1.8e-07 58.5 35 85.7
Prupe.4G090100 Prunus persica HOM05D000724 ORTHO05D000755 1.8e-07 58.5 55 65.5
Actinidia13484 Actinidia chinensis HOM05D000724 ORTHO05D000755 2.4e-07 58.2 35 85.7
Cfa000821 Carpinus fangiana HOM05D000724 ORTHO05D000755 2.4e-07 58.2 35 85.7
Haze_05818 Corylus avellana HOM05D000724 ORTHO05D000755 2.4e-07 58.2 35 85.7
Dinv06445 Davidia involucrata HOM05D000724 ORTHO05D000755 2.4e-07 58.2 55 65.5
Duzib235G0392 Durio zibethinus HOM05D000724 ORTHO05D000755 2.4e-07 58.2 35 85.7
Potri.011G098300 Populus trichocarpa HOM05D000724 ORTHO05D000755 2.4e-07 58.2 35 85.7
QL05p061797 Quercus lobata HOM05D000724 ORTHO05D000755 2.4e-07 58.2 35 85.7
Sabra11G0084500 Salix brachista HOM05D000724 ORTHO05D000755 2.4e-07 58.2 35 85.7
Sabra11G0090600 Salix brachista HOM05D000724 ORTHO05D000755 2.4e-07 58.2 35 85.7
Sed0025540 Sechium edule HOM05D000724 ORTHO05D000755 2.4e-07 58.2 35 85.7
Thecc.06G001600 Theobroma cacao HOM05D000724 ORTHO05D000755 2.4e-07 58.2 35 85.7
GSVIVG01021625001 Vitis vinifera HOM05D000724 ORTHO05D000755 2.4e-07 58.2 55 65.5
Ca_00839_v3 Cicer arietinum L. HOM05D000724 ORTHO05D000755 3.1e-07 57.8 35 82.9
Migut.M01891 Erythranthe guttata HOM05D000724 ORTHO05D000755 3.1e-07 57.8 55 65.5
Psat1g167760 Pisum sativum HOM05D000724 ORTHO05D000755 3.1e-07 57.8 35 82.9
TPR.G26326 Trifolium pratense HOM05D000724 ORTHO05D000755 3.1e-07 57.8 35 82.9
CiPaw.09G115500 Carya illinoinensis HOM05D000724 ORTHO05D000755 4.1e-07 57.4 55 65.5
ClCG03G006280 Citrullus lanatus HOM05D000724 ORTHO05D000755 4.1e-07 57.4 35 85.7
Medtr2g030130 Medicago truncatula HOM05D000724 ORTHO05D000755 4.1e-07 57.4 53 64.2
Sopen02g018990 Solanum pennellii HOM05D000724 ORTHO05D000755 4.1e-07 57.4 55 65.5
PGSC0003DMG400021125 Solanum tuberosum HOM05D000724 ORTHO05D000755 4.1e-07 57.4 55 65.5
TWI09G1143 Tripterygium wilfordii HOM05D000724 ORTHO05D000755 4.1e-07 57.4 35 82.9
Atru.chr10.853 Acer truncatum HOM05D000724 ORTHO05D000755 5.3e-07 57.0 35 82.9
Actinidia31388 Actinidia chinensis HOM05D000724 ORTHO05D000755 5.3e-07 57.0 35 80.0
Actinidia32365 Actinidia chinensis HOM05D000724 ORTHO05D000755 5.3e-07 57.0 35 80.0
CAN.G1520.2 Capsicum annuum HOM05D000724 ORTHO05D011443 5.3e-07 57.0 55 63.6
COL.COLO4_26831 Corchorus olitorius HOM05D000724 ORTHO05D000755 5.3e-07 57.0 35 82.9
FvH4_3g10070 Fragaria vesca HOM05D000724 ORTHO05D000755 5.3e-07 57.0 55 65.5
FAN11G1058 Fragaria x ananassa HOM05D000724 ORTHO05D000755 5.3e-07 57.0 55 65.5
FAN16G2844 Fragaria x ananassa HOM05D000724 ORTHO05D000755 5.3e-07 57.0 55 65.5
FAN21G1031 Fragaria x ananassa HOM05D000724 ORTHO05D000755 5.3e-07 57.0 55 65.5
FAN25G3103 Fragaria x ananassa HOM05D000724 ORTHO05D000755 5.3e-07 57.0 55 65.5
Oeu058478.1 Olea europaea HOM05D000724 ORTHO05D000755 5.3e-07 57.0 35 82.9
Rhsim02G0161200 Rhododendron simsii HOM05D000724 ORTHO05D000755 5.3e-07 57.0 35 82.9
Sopen01g023350 Solanum pennellii HOM05D000724 ORTHO05D011443 5.3e-07 57.0 35 82.9
TAR627G0893 Trochodendron aralioides HOM05D000724 ORTHO05D000755 5.3e-07 57.0 35 85.7
vmacro10974 Vaccinium macrocarpon HOM05D000724 ORTHO05D000755 5.3e-07 57.0 35 82.9
arahy.Tifrunner.gnm1.ann1.29D948 Arachis hypogaea HOM05D000724 ORTHO05D000755 6.9e-07 56.6 35 80.0
arahy.Tifrunner.gnm1.ann1.97AX4B Arachis hypogaea HOM05D000724 ORTHO05D000755 6.9e-07 56.6 35 80.0
Ciclev10014266m.g Citrus clementina HOM05D000724 ORTHO05D000755 6.9e-07 56.6 55 63.6
CsaV3_1G037340 Cucumis sativus L. HOM05D000724 ORTHO05D000755 6.9e-07 56.6 35 82.9
MD10G1253500 Malus domestica HOM05D000724 ORTHO05D000755 6.9e-07 56.6 55 65.5
Nn3g20228 Nelumbo nucifera HOM05D000724 ORTHO05D000755 6.9e-07 56.6 55 65.5
RcHm_v2.0_Chr5g0015931 Rosa chinensis HOM05D000724 ORTHO05D000755 6.9e-07 56.6 55 65.5
Solyc01g057960.3 Solanum lycopersicum HOM05D000724 ORTHO05D011443 6.9e-07 56.6 38 76.3
TWI53G2086 Tripterygium wilfordii HOM05D000724 ORTHO05D000755 6.9e-07 56.6 35 82.9
TWI73G0776 Tripterygium wilfordii HOM05D000724 ORTHO05D000755 6.9e-07 56.6 58 62.1
VMungo0540G2330 Vigna mungo HOM05D000724 ORTHO05D000755 6.9e-07 56.6 35 80.0
MELO3C002807.2 Cucumis melo HOM05D000724 ORTHO05D000755 9.0e-07 56.2 35 82.9
Gohir.A10G003800 Gossypium hirsutum HOM05D000724 ORTHO05D000755 9.0e-07 56.2 35 85.7
Lalb_Chr18g0057951 Lupinus albus HOM05D000724 ORTHO05D000755 9.0e-07 56.2 35 82.9
Manes.06G055000 Manihot esculenta HOM05D000724 ORTHO05D000755 9.0e-07 56.2 35 82.9
TAR629G1570 Trochodendron aralioides HOM05D000724 ORTHO05D000755 9.0e-07 56.2 55 65.5
Duzib192G0982 Durio zibethinus HOM05D000724 ORTHO05D000755 1.2e-06 55.8 35 80.0
Glyma.05G166400 Glycine max HOM05D000724 ORTHO05D000755 1.2e-06 55.8 35 82.9
Manes.14G122900 Manihot esculenta HOM05D000724 ORTHO05D000755 1.2e-06 55.8 35 82.9
Potri.001G372300 Populus trichocarpa HOM05D000724 ORTHO05D000755 1.2e-06 55.8 35 82.9
Sabra16G0244700 Salix brachista HOM05D000724 ORTHO05D000755 1.2e-06 55.8 35 82.9
Sed0012002 Sechium edule HOM05D000724 ORTHO05D000755 1.2e-06 55.8 34 85.3
SGA_v2.0_scaffold51G18652 Striga asiatica HOM05D000724 ORTHO05D000755 1.2e-06 55.8 55 61.8
Lalb_Chr15g0088751 Lupinus albus HOM05D000724 ORTHO05D000755 1.5e-06 55.5 35 80.0
Oeu040085.1 Olea europaea HOM05D000724 ORTHO05D000755 1.5e-06 55.5 34 82.4
Sopen12g027030 Solanum pennellii HOM05D000724 ORTHO05D011443 1.5e-06 55.5 35 82.9
vmacro14434 Vaccinium macrocarpon HOM05D000724 ORTHO05D000755 1.5e-06 55.5 35 82.9
Aqoxy1G01568 Aquilegia oxysepala HOM05D000724 ORTHO05D000755 2.0e-06 55.1 35 82.9
Glyma.09G023600 Glycine max HOM05D000724 ORTHO05D000755 2.0e-06 55.1 53 60.4
Gorai.011G004200 Gossypium raimondii HOM05D000724 ORTHO05D000755 2.0e-06 55.1 35 82.9
MD05G1273700 Malus domestica HOM05D000724 ORTHO05D000755 2.0e-06 55.1 55 63.6
Phvul.006G128600 Phaseolus vulgaris HOM05D000724 ORTHO05D000755 2.0e-06 55.1 35 77.1
Aa31LG10G6620 Aethionema arabicum HOM05D000724 ORTHO05D000755 2.6e-06 54.7 55 61.8
Carub.0001s2871 Capsella rubella HOM05D000724 ORTHO05D000755 2.6e-06 54.7 52 63.5
ClCG01G025120 Citrullus lanatus HOM05D000724 ORTHO05D000755 2.6e-06 54.7 35 80.0
MELO3C007078.2 Cucumis melo HOM05D000724 ORTHO05D000755 2.6e-06 54.7 35 80.0
CsaV3_6G052310 Cucumis sativus L. HOM05D000724 ORTHO05D000755 2.6e-06 54.7 35 80.0
Eucgr.D00184 Eucalyptus grandis HOM05D000724 ORTHO05D000755 2.6e-06 54.7 35 80.0
PGR083G1203 Punica granatum HOM05D000724 ORTHO05D000755 2.6e-06 54.7 55 61.8
SHI20701 Sapria himalayana HOM05D000724 ORTHO05D000755 2.6e-06 54.7 35 80.0
Sed0012952 Sechium edule HOM05D000724 ORTHO05D000755 2.6e-06 54.7 35 80.0
unitig_37.g12079 Utricularia gibba HOM05D000724 ORTHO05D000755 2.6e-06 54.7 55 63.6
AL1G44520 Arabidopsis lyrata HOM05D000724 ORTHO05D000755 3.4e-06 54.3 35 80.0
BcaB07g32660 Brassica carinata HOM05D000724 ORTHO05D000755 3.4e-06 54.3 35 80.0
BcaB07g32684 Brassica carinata HOM05D000724 ORTHO05D000755 3.4e-06 54.3 35 80.0
A09p35970 Brassica napus HOM05D000724 ORTHO05D000755 3.4e-06 54.3 35 80.0
C05p29490 Brassica napus HOM05D000724 ORTHO05D000755 3.4e-06 54.3 35 80.0
BolC5t31679H Brassica oleracea HOM05D000724 ORTHO05D000755 3.4e-06 54.3 35 80.0
BraA09t39121Z Brassica rapa HOM05D000724 ORTHO05D000755 3.4e-06 54.3 35 80.0
CANSAT35G1395 Cannabis sativa HOM05D000724 ORTHO05D000755 3.4e-06 54.3 35 82.9
Gohir.D10G003800 Gossypium hirsutum HOM05D000724 ORTHO05D000755 3.4e-06 54.3 55 63.6
Lj4g0004271 Lotus japonicus HOM05D000724 ORTHO05D000755 3.4e-06 54.3 35 77.1
Sp1g26330 Schrenkiella parvula HOM05D000724 ORTHO05D000755 3.4e-06 54.3 35 80.0
Glyma.08G124400 Glycine max HOM05D000724 ORTHO05D000755 4.5e-06 53.9 35 80.0
Oeu056311.2 Olea europaea HOM05D000724 ORTHO05D000755 4.5e-06 53.9 35 80.0
Rhsim01G0216100 Rhododendron simsii HOM05D000724 ORTHO05D000755 4.5e-06 53.9 35 80.0
THA.LOC104798602 Tarenaya hassleriana HOM05D000724 ORTHO05D000755 4.5e-06 53.9 55 61.8
Lj6g0009288 Lotus japonicus HOM05D000724 ORTHO05D000755 5.9e-06 53.5 53 60.4
MBI18_g10576_MAGBIO Magnolia biondii HOM05D000724 ORTHO05D000755 5.9e-06 53.5 35 80.0
Phvul.002G246800 Phaseolus vulgaris HOM05D000724 ORTHO05D000755 5.9e-06 53.5 35 77.1
SGA_v2.0_scaffold180G39671 Striga asiatica HOM05D000724 ORTHO05D000755 5.9e-06 53.5 35 77.1
VMungo0251G0321 Vigna mungo HOM05D000724 ORTHO05D000755 5.9e-06 53.5 35 77.1
AT1G30490 Arabidopsis thaliana HOM05D000724 ORTHO05D000755 7.7e-06 53.1 35 77.1
Solyc11g069470.3 Solanum lycopersicum HOM05D000724 ORTHO05D000755 7.7e-06 53.1 35 77.1
Sopen11g028190 Solanum pennellii HOM05D000724 ORTHO05D000755 7.7e-06 53.1 35 77.1
CDE12G0760 Ceratophyllum demersum HOM05D000724 ORTHO05D000755 1.0e-05 52.8 35 80.0
Lj2C1027T1 Lonicera japonica HOM05D000724 ORTHO05D000755 1.0e-05 52.8 35 80.0
Oeu013461.1 Olea europaea HOM05D000724 ORTHO05D000755 1.0e-05 52.8 35 77.1
PSO541G2198 Papaver somniferum HOM05D000724 ORTHO05D000755 1.0e-05 52.8 55 60.0
PSO675G0706 Papaver somniferum HOM05D000724 ORTHO05D000755 1.0e-05 52.8 55 60.0
HPP92_028173 Vanilla planifolia HOM05D000724 ORTHO05D011443 1.0e-05 52.8 35 77.1


User provided reference genes

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