Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_029570 Daucus carota HOM05D003719 ORTHO05D004116 1.2e-181 639.8 334 100.0
GSVIVG01019328001 Vitis vinifera HOM05D003719 ORTHO05D004116 2.6e-40 170.2 336 37.5
Dinv43515 Davidia involucrata HOM05D003719 ORTHO05D004116 9.9e-40 168.3 332 38.6
Thhalv10013571m.g Eutrema salsugineum HOM05D003719 ORTHO05D004116 1.7e-39 167.5 341 35.5
Nitab4.5_0000050g0180 Nicotiana tabacum HOM05D003719 ORTHO05D004116 1.1e-38 164.9 376 38.6
Actinidia31730 Actinidia chinensis HOM05D003719 ORTHO05D004116 1.4e-38 164.5 353 36.3
Dinv43958 Davidia involucrata HOM05D003719 ORTHO05D004116 1.4e-38 164.5 359 37.0
Gorai.007G347200 Gossypium raimondii HOM05D003719 ORTHO05D004116 1.4e-38 164.5 353 35.4
Gohir.D11G317400 Gossypium hirsutum HOM05D003719 ORTHO05D004116 2.4e-38 163.7 353 35.4
Gohir.A11G301800 Gossypium hirsutum HOM05D003719 ORTHO05D004116 3.2e-38 163.3 361 36.3
TWI60G0027 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 1.2e-37 161.4 329 37.4
CARHR195490 Cardamine hirsuta HOM05D003719 ORTHO05D004116 4.6e-37 159.5 345 35.1
Duzib177G0203 Durio zibethinus HOM05D003719 ORTHO05D004116 1.0e-36 158.3 349 35.0
TWI32G1338 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 1.3e-36 157.9 326 38.7
Actinidia05832 Actinidia chinensis HOM05D003719 ORTHO05D004116 3.9e-36 156.4 352 36.4
PGR042G1172 Punica granatum HOM05D003719 ORTHO05D004116 3.9e-36 156.4 334 37.7
Thecc.05G235300 Theobroma cacao HOM05D003719 ORTHO05D004116 5.1e-36 156.0 351 34.8
TAR629G0070 Trochodendron aralioides HOM05D003719 ORTHO05D004116 8.7e-36 155.2 351 35.9
QL04p053441 Quercus lobata HOM05D003719 ORTHO05D004116 1.1e-35 154.8 327 38.2
RcHm_v2.0_Chr1g0340791 Rosa chinensis HOM05D003719 ORTHO05D004116 1.5e-35 154.5 364 35.4
Duzib128G0107 Durio zibethinus HOM05D003719 ORTHO05D004116 3.3e-35 153.3 350 36.3
MD07G1081800 Malus domestica HOM05D003719 ORTHO05D004116 3.3e-35 153.3 359 37.0
Sp6g26530 Schrenkiella parvula HOM05D003719 ORTHO05D004116 3.3e-35 153.3 344 33.7
THA.LOC104827246 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 3.3e-35 153.3 357 37.8
AL6G28780 Arabidopsis lyrata HOM05D003719 ORTHO05D004116 4.3e-35 152.9 343 35.0
Manes.09G133700 Manihot esculenta HOM05D003719 ORTHO05D004116 4.3e-35 152.9 358 37.7
Ciclev10031549m.g Citrus clementina HOM05D003719 ORTHO05D004116 5.6e-35 152.5 342 36.3
CDE11G0837 Ceratophyllum demersum HOM05D003719 ORTHO05D004116 9.6e-35 151.8 349 34.4
MSTRG.4990 Avicennia marina HOM05D003719 ORTHO05D004116 1.6e-34 151.0 362 36.5
THA.LOC104802889 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 1.6e-34 151.0 329 37.1
Hund17170 Selenicereus undatus HOM05D003719 ORTHO05D000105 2.1e-34 150.6 339 36.0
AT5G17690 Arabidopsis thaliana HOM05D003719 ORTHO05D004116 2.8e-34 150.2 344 35.8
THA.LOC104820814 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 2.8e-34 150.2 381 34.6
Carub.0006s1593 Capsella rubella HOM05D003719 ORTHO05D004116 4.8e-34 149.4 341 34.3
Hma1.2p1_0128F.1_g060060 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 4.8e-34 149.4 353 34.6
Nitab4.5_0000792g0110 Nicotiana tabacum HOM05D003719 ORTHO05D004116 4.8e-34 149.4 357 33.9
Potri.019G044400 Populus trichocarpa HOM05D003719 ORTHO05D004116 6.2e-34 149.1 361 36.3
HanXRQChr04g0117621 Helianthus annuus HOM05D003719 ORTHO05D004116 8.1e-34 148.7 352 34.4
Lj9A617T60 Lonicera japonica HOM05D003719 ORTHO05D004116 1.8e-33 147.5 306 38.9
TPR.G38555 Trifolium pratense HOM05D001257 ORTHO05D005285 2.4e-33 147.1 307 35.2
Manes.08G156200 Manihot esculenta HOM05D003719 ORTHO05D004116 3.1e-33 146.7 355 35.2
Aa31LG11G11940 Aethionema arabicum HOM05D003719 ORTHO05D004116 4.0e-33 146.4 317 34.7
Potri.013G070400 Populus trichocarpa HOM05D003719 ORTHO05D004116 4.0e-33 146.4 359 35.7
BcaB08g36751 Brassica carinata HOM05D003719 ORTHO05D004116 6.9e-33 145.6 339 34.2
CANSAT25G2268 Cannabis sativa HOM05D003719 ORTHO05D004116 1.2e-32 144.8 345 35.1
MD02G1231000 Malus domestica HOM05D003719 ORTHO05D004116 1.2e-32 144.8 360 35.8
Sabra19G0054700 Salix brachista HOM05D003719 ORTHO05D004116 2.0e-32 144.1 368 35.1
MBI04_g06283_MAGBIO Magnolia biondii HOM05D003719 ORTHO05D004116 7.6e-32 142.1 351 32.2
Eucgr.E01743 Eucalyptus grandis HOM05D003719 ORTHO05D004116 9.9e-32 141.7 356 35.4
Atru.chr2.1627 Acer truncatum HOM05D003719 ORTHO05D004116 2.2e-31 140.6 367 34.6
ClCG06G000580 Citrullus lanatus HOM05D003719 ORTHO05D004116 2.9e-31 140.2 355 34.4
Glyma.03G094200 Glycine max HOM05D003719 ORTHO05D004116 2.9e-31 140.2 340 35.0
Rhsim07G0047900 Rhododendron simsii HOM05D003719 ORTHO05D004116 2.9e-31 140.2 399 32.1
Sed0010466 Sechium edule HOM05D003719 ORTHO05D004116 3.8e-31 139.8 346 35.8
Sopen01g033060 Solanum pennellii HOM05D003719 ORTHO05D004116 4.9e-31 139.4 331 34.1
Solyc01g081500.4 Solanum lycopersicum HOM05D003719 ORTHO05D004116 8.4e-31 138.7 331 34.1
C02p09250 Brassica napus HOM05D003719 ORTHO05D004116 1.1e-30 138.3 315 35.9
BolC2t06833H Brassica oleracea HOM05D003719 ORTHO05D004116 1.1e-30 138.3 314 36.0
Glyma.16G079900 Glycine max HOM05D003719 ORTHO05D004116 1.1e-30 138.3 355 33.5
PSO170G0628 Papaver somniferum HOM05D003719 ORTHO05D004116 1.9e-30 137.5 360 31.9
FAN06G0622 Fragaria x ananassa HOM05D003719 ORTHO05D004116 2.4e-30 137.1 369 34.1
FAN10G3972 Fragaria x ananassa HOM05D003719 ORTHO05D004116 3.2e-30 136.7 364 34.3
PSO017G6528 Papaver somniferum HOM05D003719 ORTHO05D004116 3.2e-30 136.7 364 31.9
unitig_0.g1580 Utricularia gibba HOM05D003719 ORTHO05D004116 4.2e-30 136.3 325 33.5
arahy.Tifrunner.gnm1.ann1.N569AS Arachis hypogaea HOM05D003719 ORTHO05D004116 5.5e-30 136.0 355 33.8
BcaC03g13534 Brassica carinata HOM05D003719 ORTHO05D004116 5.5e-30 136.0 315 35.9
A02p04380 Brassica napus HOM05D003719 ORTHO05D004116 7.1e-30 135.6 326 35.3
Ah.05g177100 Amaranthus hybridus HOM05D003719 ORTHO05D004116 9.3e-30 135.2 328 34.5
BraA02t05402Z Brassica rapa HOM05D003719 ORTHO05D004116 9.3e-30 135.2 326 35.3
HanXRQChr11g0343451 Helianthus annuus HOM05D003719 ORTHO05D004116 1.6e-29 134.4 331 32.9
MELO3C022484.2 Cucumis melo HOM05D003719 ORTHO05D004116 2.1e-29 134.0 352 33.5
arahy.Tifrunner.gnm1.ann1.U92JU2 Arachis hypogaea HOM05D003719 ORTHO05D004116 2.7e-29 133.7 344 34.3
PGSC0003DMG400031112 Solanum tuberosum HOM05D003719 ORTHO05D004116 2.7e-29 133.7 344 32.6
Sed0017190 Sechium edule HOM05D003719 ORTHO05D004116 3.5e-29 133.3 312 34.9
Migut.N01648 Erythranthe guttata HOM05D003719 ORTHO05D004116 4.6e-29 132.9 363 34.4
Aqoxy7G02508 Aquilegia oxysepala HOM05D003719 ORTHO05D004116 6.0e-29 132.5 348 33.6
Sc02g0003460 Simmondsia chinensis HOM05D003719 ORTHO05D004116 7.9e-29 132.1 343 34.4
CsaV3_6G006350 Cucumis sativus L. HOM05D003719 ORTHO05D004116 1.0e-28 131.7 352 33.0
CiPaw.02G047600 Carya illinoinensis HOM05D003719 ORTHO05D004116 1.3e-28 131.3 358 34.6
EL10Ac1g00661 Beta vulgaris HOM05D003719 ORTHO05D004116 3.0e-28 130.2 332 34.0
Cc02_g26500 Coffea canephora HOM05D003719 ORTHO05D004116 3.0e-28 130.2 335 34.9
Peaxi162Scf00245g00417 Petunia axillaris HOM05D003719 ORTHO05D004116 3.0e-28 130.2 379 33.8
BcaC04g18768 Brassica carinata HOM05D003719 ORTHO05D004116 3.9e-28 129.8 335 32.2
C09p59480 Brassica napus HOM05D003719 ORTHO05D004116 3.9e-28 129.8 335 32.2
BolC9t58786H Brassica oleracea HOM05D003719 ORTHO05D004116 3.9e-28 129.8 335 32.2
ECA236G3956 Erigeron canadensis HOM05D001257 ORTHO05D005285 6.7e-28 129.0 356 30.3
Glyma.06G001700 Glycine max HOM05D003719 ORTHO05D004116 6.7e-28 129.0 333 33.3
ClCG05G002450 Citrullus lanatus HOM05D003719 ORTHO05D004116 1.1e-27 128.3 332 34.3
Nn1g09363 Nelumbo nucifera HOM05D003719 ORTHO05D004116 1.1e-27 128.3 364 33.0
Oeu020240.1 Olea europaea HOM05D003719 ORTHO05D004116 1.1e-27 128.3 348 32.8
Psat5g001120 Pisum sativum HOM05D003719 ORTHO05D004116 5.6e-27 125.9 301 33.2
A10p21730 Brassica napus HOM05D003719 ORTHO05D004116 9.6e-27 125.2 348 31.9
BraA10t44234Z Brassica rapa HOM05D003719 ORTHO05D004116 9.6e-27 125.2 348 31.9
Glyma.04G002100 Glycine max HOM05D003719 ORTHO05D004116 9.6e-27 125.2 327 33.3
DCAR_015727 Daucus carota HOM05D003719 ORTHO05D004116 1.3e-26 124.8 229 37.6
HPP92_020485 Vanilla planifolia HOM05D003719 ORTHO05D004116 1.3e-26 124.8 322 31.4
Nitab4.5_0003123g0030 Nicotiana tabacum HOM05D003719 ORTHO05D004116 4.8e-26 122.9 385 34.3
BraA09t37591Z Brassica rapa HOM05D003719 ORTHO05D004116 8.1e-26 122.1 333 31.5
Sed0012975 Sechium edule HOM05D003719 ORTHO05D004116 1.1e-25 121.7 372 31.7
ECA248G2234 Erigeron canadensis HOM05D003719 ORTHO05D004116 1.8e-25 120.9 346 29.8
Phvul.009G117500 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 1.8e-25 120.9 341 33.7
FvH4_7g08280 Fragaria vesca HOM05D003719 ORTHO05D004116 3.1e-25 120.2 328 33.2
Phvul.010G034600 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 2.0e-24 117.5 357 32.8
TPR.G9787 Trifolium pratense HOM05D003719 ORTHO05D004116 2.0e-24 117.5 379 29.8
VMungo1309G0350 Vigna mungo HOM05D003719 ORTHO05D004116 2.0e-24 117.5 324 31.8
VMungo0331G0617 Vigna mungo HOM05D003719 ORTHO05D004116 2.6e-24 117.1 345 33.6
Cpa.g.sc73.30 Carica papaya HOM05D003719 ORTHO05D004116 3.4e-24 116.7 312 34.3
Nitab4.5_0025236g0010 Nicotiana tabacum HOM05D003719 ORTHO05D004116 3.4e-24 116.7 332 32.8
Sabra13G0061200 Salix brachista HOM05D003719 ORTHO05D004116 7.6e-24 115.5 355 31.5
Haze_15777 Corylus avellana HOM05D003719 ORTHO05D004116 1.0e-23 115.2 327 30.9
Lalb_Chr13g0290971 Lupinus albus HOM05D003719 ORTHO05D004116 1.7e-23 114.4 344 32.0
CsaV3_3G009890 Cucumis sativus L. HOM05D002544 ORTHO05D007277 3.8e-23 113.2 348 30.5
PSO732G0471 Papaver somniferum HOM05D003719 ORTHO05D004116 1.1e-22 111.7 308 32.1
Ca_23168_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 1.9e-22 110.9 343 31.8
Lj3g0017682 Lotus japonicus HOM05D003719 ORTHO05D004116 2.5e-22 110.5 350 32.6
ATR0568G049 Amborella trichopoda HOM05D003719 ORTHO05D004116 3.2e-22 110.2 349 28.9
DCAR_025000 Daucus carota HOM05D003719 ORTHO05D004116 4.2e-22 109.8 220 37.7
Lalb_Chr07g0194591 Lupinus albus HOM05D003719 ORTHO05D004116 4.2e-22 109.8 337 30.9
Os10g0324900 Oryza sativa ssp. japonica HOM05D003719 ORTHO05D004116 1.2e-21 108.2 328 30.8
Lalb_Chr23g0264911 Lupinus albus HOM05D003719 ORTHO05D004116 7.9e-21 105.5 310 31.9
Oeu024948.1 Olea europaea HOM05D003719 ORTHO05D004116 1.3e-20 104.8 355 32.4
Prupe.2G107000 Prunus persica HOM05D003719 ORTHO05D004116 5.1e-20 102.8 316 31.6
Lsat_1_v5_gn_1_89600 Lactuca sativa HOM05D003719 ORTHO05D004116 1.1e-19 101.7 343 30.0
Peaxi162Scf00907g00023 Petunia axillaris HOM05D003719 ORTHO05D004116 1.5e-19 101.3 332 31.3
Sopen10g009690 Solanum pennellii HOM05D003719 ORTHO05D004116 1.9e-19 100.9 173 41.6
BcaB01g04909 Brassica carinata HOM05D003719 ORTHO05D004116 5.7e-19 99.4 318 30.2
BcaB01g05152 Brassica carinata HOM05D003719 ORTHO05D004116 1.6e-18 97.8 305 31.1
BolC3t13474H Brassica oleracea HOM05D003719 ORTHO05D004116 1.6e-18 97.8 305 31.1
Nn7g37398 Nelumbo nucifera HOM05D003719 ORTHO05D004116 3.7e-18 96.7 75 58.7
BraA09t38097Z Brassica rapa HOM05D003719 ORTHO05D004116 4.8e-18 96.3 125 44.8
AUR62038028 Chenopodium quinoa HOM05D003719 ORTHO05D004116 6.3e-18 95.9 303 31.0
Glyma.03G111600 Glycine max HOM05D003719 ORTHO05D004116 1.4e-17 94.7 106 50.9
Lsat_1_v5_gn_7_34101 Lactuca sativa HOM05D003719 ORTHO05D004116 6.9e-17 92.4 358 28.5
PGSC0003DMG400031514 Solanum tuberosum HOM05D003719 ORTHO05D004116 1.5e-16 91.3 473 25.6
Solyc10g024470.3 Solanum lycopersicum HOM05D003719 ORTHO05D004116 2.0e-16 90.9 456 27.6
Oeu034882.1 Olea europaea HOM05D003719 ORTHO05D004116 2.6e-16 90.5 247 33.6
FAN03G1006 Fragaria x ananassa HOM05D003719 ORTHO05D004116 3.4e-16 90.1 352 30.4
SHI54853 Sapria himalayana HOM05D003719 ORTHO05D004116 5.9e-16 89.4 308 30.8
A03p08460 Brassica napus HOM05D003719 ORTHO05D004116 1.0e-15 88.6 329 28.3
BraA03t10169Z Brassica rapa HOM05D003719 ORTHO05D004116 1.0e-15 88.6 329 28.3
PSO170G3936 Papaver somniferum HOM05D033783 ORTHO05D004116 1.0e-15 88.6 66 57.6
Migut.O00699 Erythranthe guttata HOM05D003719 ORTHO05D004116 2.2e-15 87.4 104 49.0
PSO017G2979 Papaver somniferum HOM05D033783 ORTHO05D004116 2.2e-15 87.4 66 56.1
PSO675G5773 Papaver somniferum HOM05D003719 ORTHO05D004116 6.5e-15 85.9 101 47.5
Psat4g207560 Pisum sativum HOM05D003719 ORTHO05D004116 1.4e-14 84.7 86 48.8
PSO732G0498 Papaver somniferum HOM05D003719 ORTHO05D004116 2.5e-14 84.0 208 33.7
PSO732G0548 Papaver somniferum HOM05D003719 ORTHO05D004116 2.5e-14 84.0 208 33.7
Lalb_Chr10g0091841 Lupinus albus HOM05D003719 ORTHO05D004116 4.2e-14 83.2 84 48.8
PSO017G0756 Papaver somniferum HOM05D003719 ORTHO05D004116 7.2e-14 82.4 56 60.7
PSO017G2223 Papaver somniferum HOM05D003719 ORTHO05D004116 1.2e-13 81.6 217 32.3
HanXRQChr04g0117671 Helianthus annuus HOM05D003719 ORTHO05D004116 2.7e-13 80.5 104 43.3
Oeu045633.2 Olea europaea HOM05D003719 ORTHO05D004116 2.7e-13 80.5 343 29.4
SEGI_28532 Sequoiadendron giganteum HOM05D003719 ORTHO05D004116 2.7e-13 80.5 120 37.5
COL.COLO4_32214 Corchorus olitorius HOM05D003719 ORTHO05D004116 4.6e-13 79.7 292 29.1
Lalb_Chr12g0210141 Lupinus albus HOM05D003719 ORTHO05D004116 7.9e-13 79.0 343 29.2
C03p09860 Brassica napus HOM05D003719 ORTHO05D004116 1.8e-12 77.8 310 31.3
Lalb_Chr13g0290921 Lupinus albus HOM05D003719 ORTHO05D004116 2.3e-12 77.4 114 43.9
arahy.Tifrunner.gnm1.ann1.E07VAV Arachis hypogaea HOM05D003719 ORTHO05D004116 3.0e-12 77.0 323 30.0
SGA_v2.0_scaffold4G02229 Striga asiatica HOM05D003719 ORTHO05D004116 3.0e-12 77.0 360 29.2
FAN01G0294 Fragaria x ananassa HOM05D003719 ORTHO05D004116 6.7e-12 75.9 232 32.8
PSO349G0045 Papaver somniferum HOM05D003719 ORTHO05D004116 6.7e-12 75.9 89 43.8
SGA_v2.0_scaffold95G28748 Striga asiatica HOM05D003719 ORTHO05D004116 4.3e-11 73.2 345 27.8
Pp3c9_6410 Physcomitrium patens HOM05D003719 ORTHO05D004116 5.7e-11 72.8 82 43.9
Mapoly0009s0028 Marchantia polymorpha HOM05D003719 ORTHO05D004116 7.4e-11 72.4 87 37.9
Oeu032776.1 Olea europaea HOM05D003719 ORTHO05D004116 2.8e-10 70.5 321 28.7
Hund26916 Selenicereus undatus HOM05D003719 ORTHO05D004116 1.4e-09 68.2 322 25.8
vmacro13601 Vaccinium macrocarpon HOM05D003719 ORTHO05D004116 4.1e-09 66.6 159 31.4
Migut.O00700 Erythranthe guttata HOM05D003719 ORTHO05D004116 5.3e-09 66.2 117 38.5
Ca_15283_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 6.9e-09 65.9 256 27.3
Ca_15419_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 6.9e-09 65.9 256 27.3
PSO732G0588 Papaver somniferum HOM05D003719 ORTHO05D004116 1.2e-08 65.1 55 52.7
Mapoly0010s0167 Marchantia polymorpha HOM05D003719 ORTHO05D004116 3.4e-08 63.5 128 33.6
Ah.05g177090 Amaranthus hybridus HOM05D000308 ORTHO05D005285 4.5e-08 63.2 256 27.0
AUR62014507 Chenopodium quinoa HOM05D003719 ORTHO05D004116 5.9e-08 62.8 279 28.3
Hma1.2p1_0462F.1_g158020 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 5.9e-08 62.8 273 28.9
SEGI_39270 Sequoiadendron giganteum HOM05D003719 ORTHO05D004116 1.3e-07 61.6 401 20.9
CAN.G1260.1 Capsicum annuum HOM05D003719 ORTHO05D004116 2.2e-07 60.8 58 50.0
arahy.Tifrunner.gnm1.ann1.RGD672 Arachis hypogaea HOM05D022377 ORTHO05D004116 6.5e-07 59.3 81 35.8
CAN.G1612.6 Capsicum annuum HOM05D003719 ORTHO05D004116 1.1e-06 58.5 92 37.0
FAN01G0740 Fragaria x ananassa HOM05D003719 ORTHO05D004116 1.9e-06 57.8 68 48.5
arahy.Tifrunner.gnm1.ann1.FLAY3S Arachis hypogaea HOM05D003719 ORTHO05D004116 4.2e-06 56.6 72 38.9
CAN.G1612.7 Capsicum annuum HOM05D000541 ORTHO05D000137 5.5e-06 56.2 103 35.9
arahy.Tifrunner.gnm1.ann1.SX0HJ3 Arachis hypogaea HOM05D022377 ORTHO05D004116 7.2e-06 55.8 84 36.9


User provided reference genes

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