Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027848 Daucus carota HOM05D003624 ORTHO05D004188 4.0e-191 671.4 373 100.0
DCAR_001936 Daucus carota HOM05D003624 ORTHO05D004188 9.8e-113 411.0 392 57.7
Lsat_1_v5_gn_3_22041 Lactuca sativa HOM05D003624 ORTHO05D004188 4.4e-105 385.6 386 53.6
Lj2C36T16 Lonicera japonica HOM05D003624 ORTHO05D004188 6.4e-104 381.7 392 56.6
Rhsim03G0131100 Rhododendron simsii HOM05D003624 ORTHO05D004188 2.0e-102 376.7 391 57.3
CSS0018661 Camellia sinensis var. sinensis HOM05D003624 ORTHO05D004188 2.7e-102 376.3 397 54.2
Cc07_g19190 Coffea canephora HOM05D003624 ORTHO05D004188 2.7e-102 376.3 388 51.5
Cc04_g09670 Coffea canephora HOM05D003624 ORTHO05D004188 1.3e-101 374.0 385 51.4
Oeu048253.2 Olea europaea HOM05D003624 ORTHO05D004188 2.3e-101 373.2 402 56.2
Duzib114G1042 Durio zibethinus HOM05D003624 ORTHO05D004188 3.0e-101 372.9 390 52.3
Rhsim05G0153700 Rhododendron simsii HOM05D003624 ORTHO05D004188 5.0e-101 372.1 391 56.5
Dinv27204 Davidia involucrata HOM05D003624 ORTHO05D004188 1.1e-100 370.9 395 55.9
Hma1.2p1_0493F.1_g164850 Hydrangea macrophylla HOM05D003624 ORTHO05D004188 1.5e-100 370.5 397 54.7
Peaxi162Scf00001g00045 Petunia axillaris HOM05D003624 ORTHO05D004188 2.5e-100 369.8 397 52.6
Sc10g0001520 Simmondsia chinensis HOM05D003624 ORTHO05D004188 9.5e-100 367.9 393 50.6
ClCG05G013440 Citrullus lanatus HOM05D003624 ORTHO05D004188 1.6e-99 367.1 394 50.8
HanXRQChr08g0234751 Helianthus annuus HOM05D003624 ORTHO05D004188 1.6e-99 367.1 408 50.5
Peaxi162Scf00015g10126 Petunia axillaris HOM05D003624 ORTHO05D004188 1.6e-99 367.1 397 52.4
CANSAT54G1653 Cannabis sativa HOM05D003624 ORTHO05D004188 2.1e-99 366.7 395 55.4
Manes.07G115700 Manihot esculenta HOM05D003624 ORTHO05D004188 2.1e-99 366.7 397 53.7
vmacro17110 Vaccinium macrocarpon HOM05D003624 ORTHO05D004188 2.8e-99 366.3 390 56.4
Potri.010G204900 Populus trichocarpa HOM05D003624 ORTHO05D004188 4.7e-99 365.5 401 55.6
Nn6g34375 Nelumbo nucifera HOM05D003624 ORTHO05D004188 8.1e-99 364.8 384 51.6
unitig_749.g13772 Utricularia gibba HOM05D003624 ORTHO05D004188 8.1e-99 364.8 398 52.5
MELO3C014877.2 Cucumis melo HOM05D003624 ORTHO05D004188 3.1e-98 362.8 395 49.9
ClCG01G013570 Citrullus lanatus HOM05D003624 ORTHO05D004188 5.2e-98 362.1 396 50.8
Gohir.D10G228000 Gossypium hirsutum HOM05D003624 ORTHO05D004188 8.9e-98 361.3 393 50.4
Gorai.011G260400 Gossypium raimondii HOM05D003624 ORTHO05D004188 8.9e-98 361.3 393 50.4
QL06p008449 Quercus lobata HOM05D003624 ORTHO05D004188 8.9e-98 361.3 384 54.7
CsaV3_3G027090 Cucumis sativus L. HOM05D003624 ORTHO05D004188 1.2e-97 360.9 395 49.6
Potri.008G055300 Populus trichocarpa HOM05D003624 ORTHO05D004188 1.5e-97 360.5 398 55.5
CAN.G862.53 Capsicum annuum HOM05D003624 ORTHO05D004188 2.0e-97 360.1 395 55.7
Prupe.2G234600 Prunus persica HOM05D003624 ORTHO05D004188 2.0e-97 360.1 395 50.6
Gohir.A10G218400 Gossypium hirsutum HOM05D003624 ORTHO05D004188 2.6e-97 359.8 404 48.8
Nitab4.5_0001992g0010 Nicotiana tabacum HOM05D003624 ORTHO05D004188 2.6e-97 359.8 399 50.9
QL09p007395 Quercus lobata HOM05D003624 ORTHO05D004188 2.6e-97 359.8 387 54.5
QL93p0214_0025 Quercus lobata HOM05D003624 ORTHO05D004188 2.6e-97 359.8 387 54.5
Ciclev10005088m.g Citrus clementina HOM05D003624 ORTHO05D004188 4.4e-97 359.0 405 53.1
MBI12_g10423_MAGBIO Magnolia biondii HOM05D003624 ORTHO05D004188 1.3e-96 357.5 393 53.9
Thecc.10G043100 Theobroma cacao HOM05D003624 ORTHO05D004188 2.2e-96 356.7 389 50.4
Nitab4.5_0006489g0020 Nicotiana tabacum HOM05D003624 ORTHO05D004188 3.7e-96 355.9 402 50.0
Carub.0001s4395 Capsella rubella HOM05D003624 ORTHO05D004188 4.9e-96 355.5 407 50.4
Prupe.6G266400 Prunus persica HOM05D003624 ORTHO05D004188 4.9e-96 355.5 386 51.0
RcHm_v2.0_Chr1g0367021 Rosa chinensis HOM05D003624 ORTHO05D004188 4.9e-96 355.5 396 52.5
TAR636G1411 Trochodendron aralioides HOM05D003624 ORTHO05D004188 4.9e-96 355.5 395 48.6
PGR142G3002 Punica granatum HOM05D003624 ORTHO05D004188 6.4e-96 355.1 385 51.9
FvH4_7g22390 Fragaria vesca HOM05D003624 ORTHO05D004188 7.1e-95 351.7 394 51.8
FAN06G1965 Fragaria x ananassa HOM05D003624 ORTHO05D004188 7.1e-95 351.7 394 51.8
FAN06G4942 Fragaria x ananassa HOM05D003624 ORTHO05D004188 7.1e-95 351.7 394 51.8
Rhsim05G0154000 Rhododendron simsii HOM05D003624 ORTHO05D004188 7.1e-95 351.7 376 54.5
Cpa.g.sc1.400 Carica papaya HOM05D003624 ORTHO05D004188 9.2e-95 351.3 401 48.9
Duzib106G0342 Durio zibethinus HOM05D003624 ORTHO05D004188 9.2e-95 351.3 387 50.4
PSO339G0082 Papaver somniferum HOM05D003624 ORTHO05D004188 1.6e-94 350.5 397 48.6
PSO384G3632 Papaver somniferum HOM05D003624 ORTHO05D004188 1.6e-94 350.5 397 48.9
Eucgr.C04375 Eucalyptus grandis HOM05D003624 ORTHO05D004188 2.7e-94 349.7 404 49.3
Zm00001eb232160 Zea mays HOM05D003624 ORTHO05D004188 4.6e-94 349.0 421 50.1
CiPaw.01G286800 Carya illinoinensis HOM05D003624 ORTHO05D004188 6.0e-94 348.6 386 54.1
Thhalv10011527m.g Eutrema salsugineum HOM05D003624 ORTHO05D004188 1.0e-93 347.8 412 47.6
Aqoxy2G03154 Aquilegia oxysepala HOM05D003624 ORTHO05D004188 1.3e-93 347.4 400 52.2
CDE04G0801 Ceratophyllum demersum HOM05D003624 ORTHO05D004188 1.7e-93 347.1 390 51.5
Migut.B01491 Erythranthe guttata HOM05D003624 ORTHO05D004188 2.3e-93 346.7 397 47.1
Sp1g41070 Schrenkiella parvula HOM05D003624 ORTHO05D004188 2.3e-93 346.7 414 46.1
Aa31LG10G790 Aethionema arabicum HOM05D003624 ORTHO05D004188 3.0e-93 346.3 410 47.1
Sed0019448 Sechium edule HOM05D003624 ORTHO05D004188 3.0e-93 346.3 398 49.0
ATR0691G007 Amborella trichopoda HOM05D003624 ORTHO05D004188 3.9e-93 345.9 387 52.5
AL1G63460 Arabidopsis lyrata HOM05D003624 ORTHO05D004188 3.9e-93 345.9 410 49.5
Psat2g013120 Pisum sativum HOM05D003624 ORTHO05D004188 3.9e-93 345.9 397 53.9
VMungo0647G0302 Vigna mungo HOM05D003624 ORTHO05D004188 3.9e-93 345.9 396 54.3
Atru.chr4.2829 Acer truncatum HOM05D003624 ORTHO05D004188 6.6e-93 345.1 397 48.9
AT1G55460 Arabidopsis thaliana HOM05D003624 ORTHO05D004188 6.6e-93 345.1 409 46.9
CARHR045130 Cardamine hirsuta HOM05D003624 ORTHO05D004188 6.6e-93 345.1 407 47.4
MD01G1133500 Malus domestica HOM05D003624 ORTHO05D004188 6.6e-93 345.1 363 52.9
FAN01G2477 Fragaria x ananassa HOM05D003624 ORTHO05D004188 8.6e-93 344.7 364 54.7
Phvul.003G195200 Phaseolus vulgaris HOM05D003624 ORTHO05D004188 8.6e-93 344.7 397 54.2
Phvul.008G264800 Phaseolus vulgaris HOM05D003624 ORTHO05D004188 8.6e-93 344.7 398 54.8
EL10Ac2g04634 Beta vulgaris HOM05D003624 ORTHO05D004188 1.9e-92 343.6 394 48.7
Lalb_Chr04g0248651 Lupinus albus HOM05D003624 ORTHO05D004188 3.3e-92 342.8 396 54.3
Sopen05g032980 Solanum pennellii HOM05D003624 ORTHO05D004188 3.3e-92 342.8 411 50.1
Haze_15559 Corylus avellana HOM05D003624 ORTHO05D004188 4.3e-92 342.4 385 53.2
Mapoly0087s0013 Marchantia polymorpha HOM05D003624 ORTHO05D004188 5.6e-92 342.0 407 47.2
Peaxi162Scf00271g00059 Petunia axillaris HOM05D003624 ORTHO05D004188 5.6e-92 342.0 359 53.8
Lalb_Chr03g0040441 Lupinus albus HOM05D003624 ORTHO05D004188 9.5e-92 341.3 396 54.0
Solyc05g054500.1 Solanum lycopersicum HOM05D003624 ORTHO05D004188 1.2e-91 340.9 398 51.5
PGSC0003DMG400023427 Solanum tuberosum HOM05D003624 ORTHO05D004188 1.2e-91 340.9 411 48.2
HPP92_019187 Vanilla planifolia HOM05D003624 ORTHO05D004188 1.2e-91 340.9 410 49.5
Nn3g21232 Nelumbo nucifera HOM05D003624 ORTHO05D004188 2.1e-91 340.1 353 51.8
Sabra08G0039900 Salix brachista HOM05D003624 ORTHO05D004188 2.8e-91 339.7 396 50.8
Ca_06309_v3 Cicer arietinum L. HOM05D003624 ORTHO05D004188 4.7e-91 339.0 394 54.6
AUR62032608 Chenopodium quinoa HOM05D003624 ORTHO05D004188 8.1e-91 338.2 397 48.9
Ah.16g102270 Amaranthus hybridus HOM05D003624 ORTHO05D004188 1.8e-90 337.0 395 47.3
AUR62031721 Chenopodium quinoa HOM05D003624 ORTHO05D004188 8.9e-90 334.7 398 46.0
FAN10G3681 Fragaria x ananassa HOM05D003624 ORTHO05D004188 1.5e-89 334.0 364 48.9
FAN01G1443 Fragaria x ananassa HOM05D003624 ORTHO05D004188 2.6e-89 333.2 392 50.0
Medtr5g092130 Medicago truncatula HOM05D003624 ORTHO05D004188 3.4e-89 332.8 396 52.3
TWI60G1571 Tripterygium wilfordii HOM05D003624 ORTHO05D004188 3.4e-89 332.8 406 48.8
FAN03G2437 Fragaria x ananassa HOM05D003624 ORTHO05D004188 5.8e-89 332.0 394 49.5
COL.COLO4_34579 Corchorus olitorius HOM05D003624 ORTHO05D004188 7.6e-89 331.6 381 50.4
THA.LOC104815670 Tarenaya hassleriana HOM05D003624 ORTHO05D004188 7.6e-89 331.6 406 51.0
Glyma.02G288800 Glycine max HOM05D003624 ORTHO05D004188 2.9e-88 329.7 396 52.8
Glyma.14G026000 Glycine max HOM05D003624 ORTHO05D004188 3.8e-88 329.3 397 53.1
A05p17470 Brassica napus HOM05D003624 ORTHO05D004188 4.9e-88 328.9 411 45.7
BraA05t20642Z Brassica rapa HOM05D003624 ORTHO05D004188 4.9e-88 328.9 411 45.7
Lj3g0027074 Lotus japonicus HOM05D003624 ORTHO05D004188 8.4e-88 328.2 396 52.8
BcaB02g10822 Brassica carinata HOM05D003624 ORTHO05D004188 2.4e-87 326.6 392 47.2
BcaC08g44198 Brassica carinata HOM05D003624 ORTHO05D004188 3.2e-87 326.2 416 45.4
BolC6t36805H Brassica oleracea HOM05D003624 ORTHO05D004188 3.2e-87 326.2 416 45.4
C06p16060 Brassica napus HOM05D003624 ORTHO05D004188 5.4e-87 325.5 416 45.2
TPR.G29126 Trifolium pratense HOM05D003624 ORTHO05D004188 7.1e-87 325.1 396 51.5
Os03g0570300 Oryza sativa ssp. japonica HOM05D003624 ORTHO05D004188 1.2e-86 324.3 427 44.5
arahy.Tifrunner.gnm1.ann1.2R0TK7 Arachis hypogaea HOM05D003624 ORTHO05D004188 1.6e-86 323.9 398 51.8
Pp3c24_1610 Physcomitrium patens HOM05D003624 ORTHO05D004188 2.1e-86 323.6 407 45.7
CDE07G1603 Ceratophyllum demersum HOM05D003624 ORTHO05D004188 6.0e-86 322.0 353 51.6
BcaB04g16957 Brassica carinata HOM05D003624 ORTHO05D004188 1.3e-85 320.9 400 46.0
Zm00001eb208070 Zea mays HOM05D003624 ORTHO05D004188 1.7e-85 320.5 420 49.3
CSS0014624 Camellia sinensis var. sinensis HOM05D003624 ORTHO05D004188 5.1e-85 318.9 371 49.1
Lj3g0001422 Lotus japonicus HOM05D003624 ORTHO05D004188 8.7e-85 318.2 398 51.8
Aqoxy6G02821 Aquilegia oxysepala HOM05D003624 ORTHO05D004188 1.5e-84 317.4 395 48.4
AL185U10020 Arabidopsis lyrata HOM05D003624 ORTHO05D004188 1.9e-84 317.0 397 46.9
LjContig00310g0027848 Lotus japonicus HOM05D003624 ORTHO05D004188 2.5e-84 316.6 396 52.3
Nitab4.5_0000578g0060 Nicotiana tabacum HOM05D003624 ORTHO05D004188 2.5e-84 316.6 371 49.1
Nitab4.5_0004476g0070 Nicotiana tabacum HOM05D003624 ORTHO05D004188 3.3e-84 316.2 339 54.9
ECA247G0176 Erigeron canadensis HOM05D003624 ORTHO05D004188 1.4e-82 310.8 351 51.3
C03p92710 Brassica napus HOM05D003624 ORTHO05D004188 3.1e-82 309.7 400 45.0
BcaC01g01521 Brassica carinata HOM05D003624 ORTHO05D004188 4.0e-82 309.3 395 45.1
BolSC126t60220H Brassica oleracea HOM05D003624 ORTHO05D004188 4.0e-82 309.3 395 45.1
A08p00650 Brassica napus HOM05D003624 ORTHO05D004188 5.2e-82 308.9 389 45.2
BraA08t32123Z Brassica rapa HOM05D003624 ORTHO05D004188 5.2e-82 308.9 389 45.2
ECA232G3640 Erigeron canadensis HOM05D003624 ORTHO05D004188 8.4e-80 301.6 351 50.1
COL.COLO4_15033 Corchorus olitorius HOM05D003624 ORTHO05D004188 1.1e-79 301.2 382 43.7
AagrBONN_evm.TU.Sc2ySwM_368.2590 Anthoceros agrestis HOM05D003624 ORTHO05D004188 2.4e-79 300.1 404 42.3
SMO358G0194 Selaginella moellendorffii HOM05D003624 ORTHO05D004188 2.1e-78 297.0 396 42.7
SEGI_37535 Sequoiadendron giganteum HOM05D003624 ORTHO05D004188 6.0e-78 295.4 397 47.9
Atru.chr11.11 Acer truncatum HOM05D003624 ORTHO05D004188 5.1e-77 292.4 343 45.5
SMO142G0061 Selaginella moellendorffii HOM05D003624 ORTHO05D004188 1.1e-76 291.2 382 42.9
Psat2g013800 Pisum sativum HOM05D003624 ORTHO05D004188 1.9e-76 290.4 382 44.2
Prupe.4G141300 Prunus persica HOM05D003624 ORTHO05D004188 3.3e-76 289.7 357 48.2
Peaxi162Scf00015g01215 Petunia axillaris HOM05D003624 ORTHO05D004188 1.5e-73 280.8 328 51.2
Lj8P413T16 Lonicera japonica HOM05D003624 ORTHO05D004188 3.9e-69 266.2 336 47.0
AT5G51795 Arabidopsis thaliana HOM05D003624 ORTHO05D004188 9.6e-68 261.5 372 40.9
EL10Ac6g13458 Beta vulgaris HOM05D003624 ORTHO05D004188 6.9e-66 255.4 381 40.7
GSVIVG01008269001 Vitis vinifera HOM05D003624 ORTHO05D004188 8.4e-64 248.4 376 41.5
Prupe.1G588200 Prunus persica HOM05D003624 ORTHO05D004188 5.8e-57 225.7 304 47.0
CAN.G1013.23 Capsicum annuum HOM05D003624 ORTHO05D004188 1.4e-55 221.1 396 37.1
Actinidia02952 Actinidia chinensis HOM05D003624 ORTHO05D004188 5.5e-55 219.2 241 50.2
Cre16.g654350 Chlamydomonas reinhardtii HOM05D003624 ORTHO05D004188 7.4e-52 208.8 439 32.8
unitig_26.g9714 Utricularia gibba HOM05D001237 ORTHO05D001827 3.7e-51 206.5 165 58.8
Ca_20539_v3 Cicer arietinum L. HOM05D003624 ORTHO05D004188 1.4e-50 204.5 165 59.4
MCO11G291 Micromonas commoda HOM05D003624 ORTHO05D004188 4.1e-50 203.0 369 35.5
Duzib106G1275 Durio zibethinus HOM05D003624 ORTHO05D004188 9.0e-50 201.8 165 57.0
CBR_g4138 Chara braunii HOM05D003624 ORTHO05D004188 5.0e-48 196.1 194 49.5
arahy.Tifrunner.gnm1.ann1.Y1WZEQ Arachis hypogaea HOM05D003624 ORTHO05D004188 3.2e-47 193.4 129 65.1
QL08p059869 Quercus lobata HOM05D003624 ORTHO05D004188 4.6e-46 189.5 329 38.9
SMO347G0189 Selaginella moellendorffii HOM05D003624 ORTHO05D004188 4.6e-46 189.5 389 33.4
COL.COLO4_15032 Corchorus olitorius HOM05D003624 ORTHO05D004188 3.4e-41 173.3 131 57.3
Lj8P417T12 Lonicera japonica HOM05D003624 ORTHO05D004188 5.9e-41 172.6 143 72.7
RcHm_v2.0_Chr4g0406621 Rosa chinensis HOM05D003624 ORTHO05D004188 1.3e-40 171.4 275 41.5
Carub.0001s4393 Capsella rubella HOM05D003624 ORTHO05D004188 5.0e-40 169.5 133 57.1
AUR62001070 Chenopodium quinoa HOM05D003624 ORTHO05D004188 1.8e-37 161.0 185 49.7
Ca_06298_v3 Cicer arietinum L. HOM05D003624 ORTHO05D004188 1.8e-37 161.0 256 52.0
Cpa.g.sc80.54 Carica papaya HOM05D003624 ORTHO05D004188 1.1e-36 158.3 152 57.2
CARHR218910 Cardamine hirsuta HOM05D003624 ORTHO05D004188 4.4e-36 156.4 194 47.4
SEGI_33076 Sequoiadendron giganteum HOM05D003919 ORTHO05D004188 7.0e-34 149.1 165 58.8
SEGI_09016 Sequoiadendron giganteum HOM05D003624 ORTHO05D004188 3.4e-33 146.7 149 62.4
CBR_g36354 Chara braunii HOM05D003624 ORTHO05D004188 5.0e-32 142.9 148 51.4
Cfa024674 Carpinus fangiana HOM05D003624 ORTHO05D004188 3.2e-31 140.2 165 43.6
MD07G1197800 Malus domestica HOM05D003624 ORTHO05D004188 1.6e-30 137.9 245 39.2
arahy.Tifrunner.gnm1.ann1.8ZK91E Arachis hypogaea HOM05D003624 ORTHO05D004188 1.8e-26 124.4 118 58.5
RcHm_v2.0_Chr2g0124981 Rosa chinensis HOM05D003624 ORTHO05D004188 4.5e-25 119.8 197 49.2
ATR0691G167 Amborella trichopoda HOM05D003624 ORTHO05D004188 2.9e-24 117.1 119 50.4
Prupe.4G141400 Prunus persica HOM05D003624 ORTHO05D004188 1.9e-23 114.4 338 27.8
CARHR218920 Cardamine hirsuta HOM05D003624 ORTHO05D004188 1.8e-21 107.8 65 69.2
Dinv02280 Davidia involucrata HOM05D003624 ORTHO05D004188 2.0e-20 104.4 87 54.0
SEGI_08994 Sequoiadendron giganteum HOM05D003624 ORTHO05D004188 3.7e-19 100.1 143 46.2
SEGI_35739 Sequoiadendron giganteum HOM05D003624 ORTHO05D004188 3.7e-19 100.1 143 46.2
arahy.Tifrunner.gnm1.ann1.P0I32D Arachis hypogaea HOM05D003624 ORTHO05D004188 4.8e-19 99.8 118 55.9
RcHm_v2.0_Chr4g0406611 Rosa chinensis HOM05D003624 ORTHO05D004188 4.8e-19 99.8 59 78.0
HPP92_019195 Vanilla planifolia HOM05D003624 ORTHO05D004188 1.1e-18 98.6 99 50.5
Actinidia07728 Actinidia chinensis HOM05D003624 ORTHO05D004188 7.0e-18 95.9 89 55.1
DCAR_004680 Daucus carota HOM05D003624 ORTHO05D004188 5.0e-16 89.7 70 68.6
unitig_26.g9713 Utricularia gibba HOM05D003624 ORTHO05D004188 3.2e-15 87.0 76 59.2
RcHm_v2.0_Chr2g0124991 Rosa chinensis HOM05D003624 ORTHO05D004188 5.5e-15 86.3 51 68.6
SEGI_06253 Sequoiadendron giganteum HOM05D003624 ORTHO05D004188 1.5e-12 78.2 93 50.5
TAR625G1177 Trochodendron aralioides HOM05D003624 ORTHO05D004188 6.6e-08 62.8 84 41.7
Lj8P608T25 Lonicera japonica HOM05D003624 ORTHO05D004188 2.5e-07 60.8 65 56.9
arahy.Tifrunner.gnm1.ann1.T8I7QW Arachis hypogaea HOM05D003624 ORTHO05D004188 1.2e-06 58.5 144 34.0


User provided reference genes

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