Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_027666 Daucus carota HOM05D006356 ORTHO05D007903 0.0e+00 2587.0 1306 100.0
CSS0015977 Camellia sinensis var. sinensis HOM05D006356 ORTHO05D007903 0.0e+00 1842.0 1329 70.1
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 0.0e+00 1840.9 1326 70.9
Actinidia07718 Actinidia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1805.4 1332 68.7
QL08p059009 Quercus lobata HOM05D006356 ORTHO05D007903 0.0e+00 1759.2 1323 66.7
Haze_17035 Corylus avellana HOM05D006356 ORTHO05D007903 0.0e+00 1750.7 1330 66.5
Rhsim09G0107200 Rhododendron simsii HOM05D006356 ORTHO05D007903 0.0e+00 1746.9 1331 67.2
Cfa001508 Carpinus fangiana HOM05D006356 ORTHO05D007903 0.0e+00 1740.3 1330 66.6
TAR369G0783 Trochodendron aralioides HOM05D006356 ORTHO05D007903 0.0e+00 1734.2 1330 66.2
Potri.010G208400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1725.7 1326 65.2
Peaxi162Scf00015g01616 Petunia axillaris HOM05D006356 ORTHO05D007903 0.0e+00 1721.4 1322 66.0
Thecc.10G046600 Theobroma cacao HOM05D006356 ORTHO05D007903 0.0e+00 1720.7 1330 66.3
Solyc05g054630.4 Solanum lycopersicum HOM05D006356 ORTHO05D007903 0.0e+00 1720.3 1322 65.8
TWI38G0752 Tripterygium wilfordii HOM05D006356 ORTHO05D007903 0.0e+00 1716.0 1323 65.6
PGSC0003DMG400023520 Solanum tuberosum HOM05D006356 ORTHO05D007903 0.0e+00 1708.3 1324 65.6
CAN.G1013.4 Capsicum annuum HOM05D006356 ORTHO05D007903 0.0e+00 1703.3 1325 65.2
Nitab4.5_0001831g0090 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1702.2 1321 65.9
Nitab4.5_0006342g0010 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1701.0 1349 64.4
Cc02_g08190 Coffea canephora HOM05D006356 ORTHO05D007903 0.0e+00 1693.7 1322 64.5
Gohir.D10G224900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1686.4 1333 64.3
Duzib106G0492 Durio zibethinus HOM05D006356 ORTHO05D007903 0.0e+00 1685.2 1333 64.8
Ciclev10030528m.g Citrus clementina HOM05D006356 ORTHO05D007903 0.0e+00 1682.2 1327 64.6
Sabra08G0037700 Salix brachista HOM05D006356 ORTHO05D007903 0.0e+00 1677.1 1325 63.7
Gorai.011G255900 Gossypium raimondii HOM05D006356 ORTHO05D007903 0.0e+00 1674.4 1333 63.8
Potri.008G052400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1674.4 1326 63.5
vmacro07156 Vaccinium macrocarpon HOM05D006356 ORTHO05D007903 0.0e+00 1673.3 1269 66.2
Prupe.2G231100 Prunus persica HOM05D006356 ORTHO05D007903 0.0e+00 1665.2 1320 63.6
Atru.BG.253.p Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1664.8 1238 68.2
CANSAT56G2020 Cannabis sativa HOM05D006356 ORTHO05D007903 0.0e+00 1661.4 1327 63.4
AUR62040952 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1649.8 1326 62.6
FvH4_7g21920 Fragaria vesca HOM05D006356 ORTHO05D007903 0.0e+00 1649.8 1331 63.2
FAN03G2412 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1649.8 1331 63.2
FAN06G1346 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1649.4 1331 63.2
FAN01G2014 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1648.3 1331 63.1
arahy.Tifrunner.gnm1.ann1.C821YF Arachis hypogaea HOM05D006356 ORTHO05D007903 0.0e+00 1645.2 1325 62.8
RcHm_v2.0_Chr1g0366221 Rosa chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1644.0 1328 62.7
ECA233G4627 Erigeron canadensis HOM05D006356 ORTHO05D007903 0.0e+00 1641.3 1317 63.0
EL10Ac2g03426 Beta vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1640.6 1331 62.2
Sopen05g033110 Solanum pennellii HOM05D006356 ORTHO05D007903 0.0e+00 1639.4 1244 66.5
FAN10G4053 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1637.1 1331 62.7
LjContig00357g0007551 Lotus japonicus HOM05D006356 ORTHO05D007903 0.0e+00 1631.3 1325 62.6
MBI14_g24317_MAGBIO Magnolia biondii HOM05D006356 ORTHO05D007903 0.0e+00 1626.3 1331 63.0
PGR044G1537 Punica granatum HOM05D006356 ORTHO05D007903 0.0e+00 1624.0 1327 61.8
Nn2g12928 Nelumbo nucifera HOM05D006356 ORTHO05D007903 0.0e+00 1623.6 1334 61.2
Medtr1g115300 Medicago truncatula HOM05D006356 ORTHO05D007903 0.0e+00 1617.1 1327 62.2
Ah.16g107390 Amaranthus hybridus HOM05D006356 ORTHO05D007903 0.0e+00 1615.5 1318 61.2
HanXRQChr08g0220321 Helianthus annuus HOM05D006356 ORTHO05D007903 0.0e+00 1614.0 1315 62.8
MD07G1193500 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1613.2 1328 61.7
Hund20019 Selenicereus undatus HOM05D006356 ORTHO05D007903 0.0e+00 1613.2 1270 63.5
Lsat_1_v5_gn_8_16481 Lactuca sativa HOM05D006356 ORTHO05D007903 0.0e+00 1610.9 1314 62.4
Sc20g0002610 Simmondsia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1608.6 1330 61.7
Psat2g006960 Pisum sativum HOM05D006356 ORTHO05D007903 0.0e+00 1605.5 1331 61.5
VMungo0720G2582 Vigna mungo HOM05D006356 ORTHO05D007903 0.0e+00 1605.5 1322 61.9
Gohir.A10G215900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1603.6 1249 64.9
Lalb_Chr21g0307391 Lupinus albus HOM05D006356 ORTHO05D007903 0.0e+00 1603.6 1326 61.3
ClCG09G020060 Citrullus lanatus HOM05D006356 ORTHO05D007903 0.0e+00 1597.8 1321 61.6
GSVIVG01016590001 Vitis vinifera HOM05D006356 ORTHO05D007903 0.0e+00 1596.6 1313 62.6
Migut.H00419 Erythranthe guttata HOM05D006356 ORTHO05D007903 0.0e+00 1590.5 1323 61.2
SGA_v2.0_scaffold204G41568 Striga asiatica HOM05D006356 ORTHO05D007903 0.0e+00 1587.4 1318 60.8
MELO3C025450.2 Cucumis melo HOM05D006356 ORTHO05D007903 0.0e+00 1585.9 1321 60.8
Eucgr.J00045 Eucalyptus grandis HOM05D006356 ORTHO05D007903 0.0e+00 1585.9 1331 60.9
FAN06G1693 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1585.1 1248 63.6
MD01G1123800 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1582.8 1322 60.8
Glyma.10G289800 Glycine max HOM05D006356 ORTHO05D007903 0.0e+00 1580.5 1324 61.0
Dinv31432 Davidia involucrata HOM05D006356 ORTHO05D007903 0.0e+00 1573.9 1274 64.8
PSO541G4186 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1568.9 1337 59.2
TPR.G13985 Trifolium pratense HOM05D006356 ORTHO05D007903 0.0e+00 1568.1 1331 60.5
PSO675G9381 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1564.3 1328 59.8
Aqoxy4G02989 Aquilegia oxysepala HOM05D006356 ORTHO05D007903 0.0e+00 1559.7 1341 60.3
Ca_11290_v3 Cicer arietinum L. HOM05D006356 ORTHO05D007903 0.0e+00 1554.3 1257 62.2
THA.LOC104799353 Tarenaya hassleriana HOM05D006356 ORTHO05D007903 0.0e+00 1553.5 1315 61.4
A10p24610 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1528.1 1324 59.2
BraA10t44524Z Brassica rapa HOM05D006356 ORTHO05D007903 0.0e+00 1520.8 1324 59.0
C09p63420 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1519.6 1324 58.8
Thhalv10012453m.g Eutrema salsugineum HOM05D006356 ORTHO05D007903 0.0e+00 1518.8 1325 59.2
AUR62038374 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1518.4 1191 63.4
Sp6g30340 Schrenkiella parvula HOM05D006356 ORTHO05D007903 0.0e+00 1514.2 1323 59.1
AL6G24290 Arabidopsis lyrata HOM05D006356 ORTHO05D007903 0.0e+00 1511.9 1323 59.3
BolC9t59188H Brassica oleracea HOM05D006356 ORTHO05D007903 0.0e+00 1507.7 1326 58.7
AT5G13680 Arabidopsis thaliana HOM05D006356 ORTHO05D007903 0.0e+00 1498.8 1323 59.0
Carub.0006s1184 Capsella rubella HOM05D006356 ORTHO05D007903 0.0e+00 1496.1 1323 59.0
Aa31sc144G30 Aethionema arabicum HOM05D006356 ORTHO05D007903 0.0e+00 1494.6 1351 56.9
Atru.chr12.503 Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1486.9 1097 68.9
Oeu016021.3 Olea europaea HOM05D006356 ORTHO05D007903 0.0e+00 1447.6 1562 51.3
BcaC04g24267 Brassica carinata HOM05D006356 ORTHO05D007903 0.0e+00 1439.9 1315 57.4
Manes.07G113200 Manihot esculenta HOM05D006356 ORTHO05D007903 0.0e+00 1429.1 1104 65.8
Phvul.007G011700 Phaseolus vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1385.9 1136 62.1
Os07g0563700 Oryza sativa ssp. japonica HOM05D006356 ORTHO05D007903 0.0e+00 1384.4 1331 53.0
Zm00001eb082380 Zea mays HOM05D006356 ORTHO05D007903 0.0e+00 1365.9 1335 53.0
CsaV3_5G026400 Cucumis sativus L. HOM05D006356 ORTHO05D007903 0.0e+00 1355.5 1112 60.9
CARHR199760 Cardamine hirsuta HOM05D006356 ORTHO05D007903 0.0e+00 1338.6 1157 59.8
Sed0005812 Sechium edule HOM05D006356 ORTHO05D007903 0.0e+00 1322.0 1096 60.4
HPP92_012583 Vanilla planifolia HOM05D006356 ORTHO05D007903 0.0e+00 1305.8 1319 52.9
ATR0559G370 Amborella trichopoda HOM05D006356 ORTHO05D007903 0.0e+00 1303.5 1346 51.8
COL.COLO4_14974 Corchorus olitorius HOM05D006356 ORTHO05D007903 0.0e+00 1286.9 1322 53.9
Hma1.2p1_0533F.1_g173660 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 0.0e+00 1204.9 841 72.5
CiPaw.01G284000 Carya illinoinensis HOM05D006356 ORTHO05D007903 0.0e+00 1178.7 944 62.8
CDE04G3644 Ceratophyllum demersum HOM05D006356 ORTHO05D007903 0.0e+00 1165.2 1323 50.0
Hma1.2p1_0533F.1_g173650 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 0.0e+00 1119.4 756 75.0
Cpa.g.sc1.373 Carica papaya HOM05D006356 ORTHO05D007903 0.0e+00 1112.8 905 62.0
SEGI_26197 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 0.0e+00 1108.6 1254 47.7
Mapoly0015s0194 Marchantia polymorpha HOM05D006356 ORTHO05D007903 2.3e-249 866.7 1375 38.0
unitig_736.g22670 Utricularia gibba HOM05D006356 ORTHO05D007903 1.1e-238 831.2 853 49.8
SMO352G0087 Selaginella moellendorffii HOM05D006356 ORTHO05D007903 1.6e-234 817.4 1282 39.1
Pp3c8_3890 Physcomitrium patens HOM05D006356 ORTHO05D007903 1.9e-227 793.9 1170 40.8
AagrBONN_evm.TU.Sc2ySwM_362.1673 Anthoceros agrestis HOM05D006356 ORTHO05D007903 2.7e-226 790.0 1162 39.9
SEGI_10512 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 1.5e-213 747.7 801 50.9
CBR_g230 Chara braunii HOM05D006356 ORTHO05D007903 3.0e-164 583.9 1505 29.8
unitig_736.g22669 Utricularia gibba HOM05D006356 ORTHO05D007903 7.1e-142 509.6 460 58.7
Cpa.g.sc1.372 Carica papaya HOM05D006356 ORTHO05D007903 1.2e-133 482.3 357 69.2
arahy.Tifrunner.gnm1.ann1.1A0WRJ Arachis hypogaea HOM05D006356 ORTHO05D007903 3.9e-132 477.2 376 62.8
MCO05G525 Micromonas commoda HOM05D006356 ORTHO05D007903 8.2e-90 336.7 1359 26.5
Actinidia02967 Actinidia chinensis HOM05D006356 ORTHO05D007903 2.4e-89 335.1 254 65.7
Cre08.g372500 Chlamydomonas reinhardtii HOM05D006356 ORTHO05D007903 1.6e-85 322.4 1534 24.4
Nn4g26017 Nelumbo nucifera HOM05D006356 ORTHO05D007903 8.0e-77 293.5 249 57.0
Hma1.2p1_0529F.1_g173120 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 3.1e-73 281.6 196 76.5
TAR225G0003 Trochodendron aralioides HOM05D002467 ORTHO05D003907 5.4e-73 280.8 1256 26.0
Psat2g034240 Pisum sativum HOM05D006356 ORTHO05D007903 4.7e-61 241.1 306 44.4
Hma1.2p1_0248F.1_g102020 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 6.8e-60 237.3 167 76.6
PRCOL_00001522 Prasinoderma coloniale HOM05D006356 ORTHO05D007903 7.5e-51 207.2 1364 24.8
Psat0s3149g0040 Pisum sativum HOM05D006356 ORTHO05D007903 2.0e-43 182.6 237 42.6
Psat6g224200 Pisum sativum HOM05D006356 ORTHO05D007903 1.3e-42 179.9 130 69.2
Psat0s3149g0080 Pisum sativum HOM05D006356 ORTHO05D007903 6.4e-42 177.6 224 44.6
Psat0s4636g0040 Pisum sativum HOM05D006356 ORTHO05D007903 5.1e-39 167.9 121 69.4
Lj5g0016728 Lotus japonicus HOM05D006356 ORTHO05D007903 1.4e-33 149.8 289 39.8
AUR62038375 Chenopodium quinoa HOM05D006356 ORTHO05D007903 2.3e-31 142.5 136 54.4


User provided reference genes

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