Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_025288 Daucus carota HOM05D008392 ORTHO05D010441 6.4e-216 753.8 384 100.0
DCAR_005422 Daucus carota HOM05D008392 ORTHO05D010441 1.6e-97 360.5 389 54.2
Dinv24467 Davidia involucrata HOM05D008392 ORTHO05D010441 9.0e-53 211.8 352 40.9
Actinidia35516 Actinidia chinensis HOM05D008392 ORTHO05D010441 1.7e-43 181.0 272 41.9
Peaxi162Scf01061g00127 Petunia axillaris HOM05D008392 ORTHO05D010441 4.6e-41 172.9 361 33.2
Cc02_g35180 Coffea canephora HOM05D008392 ORTHO05D010441 1.8e-40 171.0 391 33.5
CAN.G1076.23 Capsicum annuum HOM05D008392 ORTHO05D010441 4.3e-39 166.4 351 34.8
Sopen01g044120 Solanum pennellii HOM05D008392 ORTHO05D010441 4.3e-39 166.4 352 34.9
TAR362G1147 Trochodendron aralioides HOM05D001261 ORTHO05D010441 5.7e-39 166.0 414 33.1
Solyc01g100620.3 Solanum lycopersicum HOM05D008392 ORTHO05D010441 1.5e-36 157.9 336 35.7
vmacro01573 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 1.4e-34 151.4 279 36.9
Lsat_1_v5_gn_5_40160 Lactuca sativa HOM05D008392 ORTHO05D010441 7.2e-34 149.1 270 34.8
ECA246G1668 Erigeron canadensis HOM05D005510 ORTHO05D006750 2.7e-33 147.1 280 35.4
Prupe.6G312100 Prunus persica HOM05D008392 ORTHO05D010441 7.9e-33 145.6 268 35.4
Oeu053741.2 Olea europaea HOM05D008392 ORTHO05D010441 1.0e-32 145.2 354 32.5
CANSAT54G2036 Cannabis sativa HOM05D008392 ORTHO05D010441 6.7e-32 142.5 264 37.5
QL03p014198 Quercus lobata HOM05D008392 ORTHO05D010441 2.5e-31 140.6 422 31.0
MD12G1204900 Malus domestica HOM05D008392 ORTHO05D010441 1.6e-30 137.9 281 35.2
SGA_v2.0_scaffold4G01973 Striga asiatica HOM05D008392 ORTHO05D010441 2.8e-30 137.1 264 34.5
Rhsim11G0096300 Rhododendron simsii HOM05D008392 ORTHO05D010441 3.7e-30 136.7 268 37.3
VMungo0720G2188 Vigna mungo HOM05D008392 ORTHO05D010441 3.7e-30 136.7 275 34.2
Lj5g0025247 Lotus japonicus HOM05D008392 ORTHO05D010441 4.8e-30 136.3 293 34.5
SalBow7G4279 Salvia bowleyana HOM05D008392 ORTHO05D010441 1.8e-29 134.4 348 34.2
Psat6g152960 Pisum sativum HOM05D008392 ORTHO05D010441 4.1e-29 133.3 316 34.2
Phvul.007G202100 Phaseolus vulgaris HOM05D008392 ORTHO05D010441 5.3e-29 132.9 258 35.3
MD12G1205000 Malus domestica HOM05D008392 ORTHO05D010441 6.9e-29 132.5 268 35.4
Psat6g152920 Pisum sativum HOM05D008392 ORTHO05D010441 1.2e-28 131.7 299 33.8
Lalb_Chr19g0129211 Lupinus albus HOM05D008392 ORTHO05D010441 1.3e-27 128.3 261 36.4
Nitab4.5_0001338g0070 Nicotiana tabacum HOM05D008392 ORTHO05D010441 6.5e-27 125.9 387 29.7
Nitab4.5_0004525g0010 Nicotiana tabacum HOM05D008392 ORTHO05D010441 4.2e-26 123.2 354 29.7
Medtr5g080030 Medicago truncatula HOM05D008392 ORTHO05D010441 5.5e-26 122.9 252 34.1
Lj1g0008102 Lotus japonicus HOM05D008392 ORTHO05D010441 1.6e-25 121.3 260 35.4
Ca_10178_v3 Cicer arietinum L. HOM05D008392 ORTHO05D010441 2.1e-25 120.9 249 34.5
Glyma.20G096200 Glycine max HOM05D008392 ORTHO05D010441 4.6e-25 119.8 252 32.1
RcHm_v2.0_Chr3g0457251 Rosa chinensis HOM05D008392 ORTHO05D010441 7.9e-25 119.0 301 31.2
Lalb_Chr06g0167451 Lupinus albus HOM05D008392 ORTHO05D010441 1.4e-24 118.2 264 33.0
MD04G1192900 Malus domestica HOM05D008392 ORTHO05D010441 1.4e-24 118.2 265 33.6
Aqoxy2G02705 Aquilegia oxysepala HOM05D001261 ORTHO05D010441 5.1e-24 116.3 366 28.7
arahy.Tifrunner.gnm1.ann1.DRX87E Arachis hypogaea HOM05D008392 ORTHO05D010441 6.7e-24 115.9 322 27.3
arahy.Tifrunner.gnm1.ann1.S3TC9P Arachis hypogaea HOM05D008392 ORTHO05D010441 6.7e-24 115.9 322 27.6
Medtr5g095070 Medicago truncatula HOM05D008392 ORTHO05D010441 4.8e-22 109.8 263 34.2
Nn5g30235 Nelumbo nucifera HOM05D001261 ORTHO05D010441 8.2e-22 109.0 333 31.8
ATR0693G224 Amborella trichopoda HOM05D001261 ORTHO05D001130 4.5e-20 103.2 318 30.5
FvH4_6g07580 Fragaria vesca HOM05D008392 ORTHO05D010441 1.3e-19 101.7 334 28.7
FAN05G3611 Fragaria x ananassa HOM05D008392 ORTHO05D010441 8.5e-19 99.0 331 27.8
FAN02G4301 Fragaria x ananassa HOM05D001457 ORTHO05D010441 4.2e-18 96.7 331 28.1
FAN14G5205 Fragaria x ananassa HOM05D001457 ORTHO05D010441 4.2e-18 96.7 343 28.6
Psat0s3339g0160 Pisum sativum HOM05D008392 ORTHO05D010441 6.7e-16 89.4 89 48.3
Glyma.10G146432 Glycine max HOM05D008392 ORTHO05D010441 3.3e-15 87.0 93 46.2
Migut.B00948 Erythranthe guttata HOM05D008392 ORTHO05D010441 3.7e-14 83.6 236 28.8
Rhsim04G0007700 Rhododendron simsii HOM05D001261 ORTHO05D001130 8.2e-14 82.4 277 27.1
SMO367G0512 Selaginella moellendorffii HOM05D001261 ORTHO05D001130 9.1e-13 79.0 273 27.1
MBI19_g03251_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000003 1.6e-12 78.2 339 28.3
Pp3c7_23660 Physcomitrium patens HOM05D001261 ORTHO05D001130 2.0e-12 77.8 329 25.8
Actinidia03674 Actinidia chinensis HOM05D001261 ORTHO05D001130 4.5e-12 76.6 279 26.9
CDE08G0491 Ceratophyllum demersum HOM05D008392 ORTHO05D010441 1.3e-11 75.1 280 26.4
SEGI_03044 Sequoiadendron giganteum HOM05D001261 ORTHO05D001130 2.9e-11 73.9 300 25.7
MSTRG.14524 Avicennia marina HOM05D001261 ORTHO05D001130 1.9e-10 71.2 281 25.6
Thecc.07G001600 Theobroma cacao HOM05D001261 ORTHO05D001130 3.2e-10 70.5 279 25.1
Cfa016960 Carpinus fangiana HOM05D001261 ORTHO05D001130 7.2e-10 69.3 277 26.0
MBI08_g40331_MAGBIO Magnolia biondii HOM05D001261 ORTHO05D001130 9.4e-10 68.9 307 23.8
Nitab4.5_0002216g0010 Nicotiana tabacum HOM05D001261 ORTHO05D001130 1.2e-09 68.6 281 26.7
SMO367G0741 Selaginella moellendorffii HOM05D001261 ORTHO05D001130 1.2e-09 68.6 275 24.4
SEGI_22736 Sequoiadendron giganteum HOM05D001261 ORTHO05D001130 1.6e-09 68.2 303 25.7
Migut.H01714 Erythranthe guttata HOM05D001261 ORTHO05D001130 2.1e-09 67.8 277 25.3
Potri.011G168800 Populus trichocarpa HOM05D001261 ORTHO05D001130 2.1e-09 67.8 288 24.7
Mapoly0043s0128 Marchantia polymorpha HOM05D001261 ORTHO05D001130 2.7e-09 67.4 389 24.9
AUR62013853 Chenopodium quinoa HOM05D001261 ORTHO05D001130 3.6e-09 67.0 243 23.0
HanXRQChr04g0114861 Helianthus annuus HOM05D001261 ORTHO05D001130 4.7e-09 66.6 301 23.3
Aqoxy5G01079 Aquilegia oxysepala HOM05D001261 ORTHO05D001130 6.1e-09 66.2 275 24.7
TPR.G8444 Trifolium pratense HOM05D008392 ORTHO05D010441 6.1e-09 66.2 195 29.7
Lalb_Chr18g0048641 Lupinus albus HOM05D001261 ORTHO05D001130 8.0e-09 65.9 274 25.9
GSVIVG01014843001 Vitis vinifera HOM05D001261 ORTHO05D001130 8.0e-09 65.9 285 25.3
Nn5g30869 Nelumbo nucifera HOM05D001261 ORTHO05D001130 1.0e-08 65.5 333 23.4
unitig_21.g20260 Utricularia gibba HOM05D001261 ORTHO05D001130 2.3e-08 64.3 278 24.1
Cc05_g15700 Coffea canephora HOM05D001261 ORTHO05D001130 4.0e-08 63.5 280 23.9
Nn1g07633 Nelumbo nucifera HOM05D001261 ORTHO05D001130 5.2e-08 63.2 274 24.5
vmacro09799 Vaccinium macrocarpon HOM05D001261 ORTHO05D001130 5.2e-08 63.2 293 24.6
Lsat_1_v5_gn_9_46720 Lactuca sativa HOM05D001261 ORTHO05D001130 6.7e-08 62.8 272 25.7
MD11G1045900 Malus domestica HOM05D001261 ORTHO05D001130 8.8e-08 62.4 287 24.0
Prupe.6G035300 Prunus persica HOM05D001261 ORTHO05D001130 1.2e-07 62.0 266 25.9
SEGI_21670 Sequoiadendron giganteum HOM05D001261 ORTHO05D001130 1.2e-07 62.0 291 23.4
arahy.Tifrunner.gnm1.ann1.1C5WUF Arachis hypogaea HOM05D001261 ORTHO05D001130 2.6e-07 60.8 266 25.9
MD03G1042900 Malus domestica HOM05D001261 ORTHO05D001130 2.6e-07 60.8 284 23.9
PSO782G5301 Papaver somniferum HOM05D001261 ORTHO05D001130 2.6e-07 60.8 281 22.8
FAN25G3495 Fragaria x ananassa HOM05D001261 ORTHO05D001130 3.3e-07 60.5 277 23.8
Solyc12g016190.2 Solanum lycopersicum HOM05D001261 ORTHO05D001130 3.3e-07 60.5 281 26.0
TPR.G16692 Trifolium pratense HOM05D001261 ORTHO05D001130 3.3e-07 60.5 274 28.1
AUR62036749 Chenopodium quinoa HOM05D001261 ORTHO05D001130 4.4e-07 60.1 266 21.8
Thecc.04G201800 Theobroma cacao HOM05D001261 ORTHO05D001130 4.4e-07 60.1 251 23.5
arahy.Tifrunner.gnm1.ann1.8P4JNJ Arachis hypogaea HOM05D001261 ORTHO05D001130 5.7e-07 59.7 266 25.9
Haze_09915 Corylus avellana HOM05D001261 ORTHO05D001130 5.7e-07 59.7 316 23.1
Nn6g31871 Nelumbo nucifera HOM05D001261 ORTHO05D001130 5.7e-07 59.7 312 22.8
CSS0039401 Camellia sinensis var. sinensis HOM05D001261 ORTHO05D001130 7.5e-07 59.3 277 26.0
Solyc12g094440.2 Solanum lycopersicum HOM05D001261 ORTHO05D001130 7.5e-07 59.3 283 23.0
GSVIVG01008723001 Vitis vinifera HOM05D001261 ORTHO05D001130 7.5e-07 59.3 280 26.1
ATR0661G320 Amborella trichopoda HOM05D001261 ORTHO05D001130 9.7e-07 58.9 287 23.7
CSS0050103 Camellia sinensis var. sinensis HOM05D001261 ORTHO05D001130 9.7e-07 58.9 273 23.1
FAN21G2040 Fragaria x ananassa HOM05D001261 ORTHO05D001130 9.7e-07 58.9 277 23.1
PSO063G5485 Papaver somniferum HOM05D001261 ORTHO05D001130 9.7e-07 58.9 281 22.4
MBI15_g44393_MAGBIO Magnolia biondii HOM05D001261 ORTHO05D001130 1.3e-06 58.5 312 22.1
Sopen12g007980 Solanum pennellii HOM05D001261 ORTHO05D001130 1.3e-06 58.5 276 25.0
CAN.G401.4 Capsicum annuum HOM05D001261 ORTHO05D001130 1.7e-06 58.2 249 25.3
ECA232G0527 Erigeron canadensis HOM05D001261 ORTHO05D001130 1.7e-06 58.2 275 24.7
AT1G55650 Arabidopsis thaliana HOM05D001261 ORTHO05D001130 2.2e-06 57.8 290 25.9
FAN16G2494 Fragaria x ananassa HOM05D001261 ORTHO05D001130 2.2e-06 57.8 277 23.5
Manes.15G053800 Manihot esculenta HOM05D001261 ORTHO05D001130 2.2e-06 57.8 293 22.5
AagrBONN_evm.TU.Sc2ySwM_344.3465 Anthoceros agrestis HOM05D001261 ORTHO05D001130 2.8e-06 57.4 316 22.8
CiPaw.07G142500 Carya illinoinensis HOM05D001261 ORTHO05D001130 2.8e-06 57.4 286 22.4
Migut.B00949 Erythranthe guttata HOM05D008392 ORTHO05D010441 2.8e-06 57.4 61 44.3
Lj3g0005977 Lotus japonicus HOM05D001261 ORTHO05D001130 2.8e-06 57.4 286 23.4
QL08p000529 Quercus lobata HOM05D001261 ORTHO05D001130 4.8e-06 56.6 91 35.2
Cpa.g.sc1068.1 Carica papaya HOM05D001261 ORTHO05D001130 8.2e-06 55.8 300 21.3
Lj1g0017531 Lotus japonicus HOM05D001261 ORTHO05D001130 8.2e-06 55.8 289 23.5
Medtr1g116180 Medicago truncatula HOM05D001261 ORTHO05D001130 8.2e-06 55.8 269 26.0
PGR031G2500 Punica granatum HOM05D001261 ORTHO05D001130 8.2e-06 55.8 275 23.6


User provided reference genes

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