Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_025012 Daucus carota HOM05D006268 ORTHO05D008118 6.6e-99 364.0 180 100.0
DCAR_029548 Daucus carota HOM05D006268 ORTHO05D008118 3.7e-57 225.3 167 67.1
Nitab4.5_0001209g0060 Nicotiana tabacum HOM05D006268 ORTHO05D008118 2.4e-56 222.6 163 69.3
Dinv43994 Davidia involucrata HOM05D006268 ORTHO05D008118 4.1e-56 221.9 171 67.8
ECA236G2174 Erigeron canadensis HOM05D006268 ORTHO05D008118 2.0e-55 219.5 180 62.8
CSS0005578 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 3.4e-55 218.8 167 67.7
FAN03G0807 Fragaria x ananassa HOM05D006268 ORTHO05D008118 5.9e-55 218.0 167 67.1
Sopen01g032530 Solanum pennellii HOM05D006268 ORTHO05D008118 5.9e-55 218.0 163 67.5
CiPaw.13G019100 Carya illinoinensis HOM05D006268 ORTHO05D008118 7.7e-55 217.6 164 67.7
CANSAT54G1338 Cannabis sativa HOM05D006268 ORTHO05D008118 1.0e-54 217.2 170 65.3
Migut.N01815 Erythranthe guttata HOM05D006268 ORTHO05D008118 1.0e-54 217.2 167 67.1
FvH4_7g08020 Fragaria vesca HOM05D006268 ORTHO05D008118 1.0e-54 217.2 167 67.1
FAN06G0712 Fragaria x ananassa HOM05D006268 ORTHO05D008118 1.0e-54 217.2 167 67.1
Solyc01g080940.3 Solanum lycopersicum HOM05D006268 ORTHO05D008118 1.7e-54 216.5 163 66.9
Nitab4.5_0001476g0040 Nicotiana tabacum HOM05D006268 ORTHO05D008118 2.9e-54 215.7 163 68.1
Lsat_1_v5_gn_7_10860 Lactuca sativa HOM05D006268 ORTHO05D008118 3.8e-54 215.3 163 66.9
TAR375G0229 Trochodendron aralioides HOM05D006268 ORTHO05D008118 3.8e-54 215.3 164 68.3
GSVIVG01016051001 Vitis vinifera HOM05D006268 ORTHO05D008118 5.0e-54 214.9 176 63.1
SalBow4G0743 Salvia bowleyana HOM05D006268 ORTHO05D008118 8.5e-54 214.2 156 67.3
Cfa010996 Carpinus fangiana HOM05D006268 ORTHO05D008118 1.1e-53 213.8 171 65.5
Lj7C555G14 Lonicera japonica HOM05D006268 ORTHO05D008118 1.1e-53 213.8 159 66.7
EL10Ac1g00692 Beta vulgaris HOM05D006268 ORTHO05D008118 3.2e-53 212.2 157 68.2
Haze_02942 Corylus avellana HOM05D006268 ORTHO05D008118 3.2e-53 212.2 171 65.5
RcHm_v2.0_Chr1g0341291 Rosa chinensis HOM05D006268 ORTHO05D008118 4.2e-53 211.8 167 65.3
PGSC0003DMG400001820 Solanum tuberosum HOM05D006268 ORTHO05D008118 5.5e-53 211.5 163 64.4
MSTRG.4977 Avicennia marina HOM05D006268 ORTHO05D008118 9.4e-53 210.7 165 64.8
MELO3C006233.2 Cucumis melo HOM05D006268 ORTHO05D008118 1.2e-52 210.3 167 65.9
HanXRQChr04g0123661 Helianthus annuus HOM05D006268 ORTHO05D008118 1.2e-52 210.3 172 63.4
Potri.002G238300 Populus trichocarpa HOM05D006268 ORTHO05D008118 1.2e-52 210.3 159 68.6
Sabra02G0181600 Salix brachista HOM05D006268 ORTHO05D008118 1.2e-52 210.3 160 69.4
Manes.08G055700 Manihot esculenta HOM05D006268 ORTHO05D008118 1.6e-52 209.9 167 66.5
Nn1g00551 Nelumbo nucifera HOM05D006268 ORTHO05D008118 2.1e-52 209.5 171 64.9
PGR083G0810 Punica granatum HOM05D006268 ORTHO05D008118 2.1e-52 209.5 170 64.7
Rhsim01G0145800 Rhododendron simsii HOM05D006268 ORTHO05D008118 2.1e-52 209.5 162 66.0
Sed0013667 Sechium edule HOM05D006268 ORTHO05D008118 2.7e-52 209.1 171 62.0
MD00G1098400 Malus domestica HOM05D006268 ORTHO05D008118 4.7e-52 208.4 165 65.5
CAN.G1551.1 Capsicum annuum HOM05D006268 ORTHO05D008118 2.3e-51 206.1 163 63.2
CsaV3_3G010120 Cucumis sativus L. HOM05D006268 ORTHO05D008118 3.0e-51 205.7 167 64.7
Prupe.2G109200 Prunus persica HOM05D006268 ORTHO05D008118 3.9e-51 205.3 171 63.2
Actinidia33290 Actinidia chinensis HOM05D006268 ORTHO05D008118 5.2e-51 204.9 162 67.3
vmacro21105 Vaccinium macrocarpon HOM05D006268 ORTHO05D008118 8.8e-51 204.1 159 64.2
AUR62023342 Chenopodium quinoa HOM05D006268 ORTHO05D008118 1.1e-50 203.8 157 67.5
Glyma.03G093200 Glycine max HOM05D006268 ORTHO05D008118 1.1e-50 203.8 172 61.6
Hund26937 Selenicereus undatus HOM05D006268 ORTHO05D008118 1.1e-50 203.8 157 67.5
AUR62013813 Chenopodium quinoa HOM05D006268 ORTHO05D008118 1.5e-50 203.4 157 66.9
Lj3g0019214 Lotus japonicus HOM05D006268 ORTHO05D008118 1.5e-50 203.4 171 63.2
Cc02_g26120 Coffea canephora HOM05D006268 ORTHO05D008118 3.3e-50 202.2 168 62.5
COL.COLO4_19510 Corchorus olitorius HOM05D006268 ORTHO05D006513 9.7e-50 200.7 165 64.2
PSO782G1498 Papaver somniferum HOM05D006268 ORTHO05D008118 9.7e-50 200.7 173 60.7
Ca_23170_v3 Cicer arietinum L. HOM05D006268 ORTHO05D008118 1.3e-49 200.3 171 62.6
TWI59G0917 Tripterygium wilfordii HOM05D006268 ORTHO05D008118 1.3e-49 200.3 160 65.6
Aqoxy3G02409 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 1.7e-49 199.9 165 63.0
Aqoxy3G02437 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 1.7e-49 199.9 165 63.0
Glyma.16G080700 Glycine max HOM05D006268 ORTHO05D008118 2.8e-49 199.1 171 60.8
Ciclev10021110m.g Citrus clementina HOM05D006268 ORTHO05D008118 4.8e-49 198.4 163 64.4
FAN01G0355 Fragaria x ananassa HOM05D006268 ORTHO05D008118 4.8e-49 198.4 211 53.6
PSO063G1446 Papaver somniferum HOM05D006268 ORTHO05D008118 4.8e-49 198.4 173 60.1
Eucgr.D01130 Eucalyptus grandis HOM05D006268 ORTHO05D008118 6.3e-49 198.0 171 60.2
Gohir.A06G169600 Gossypium hirsutum HOM05D006268 ORTHO05D008118 1.1e-48 197.2 173 60.7
Lalb_Chr07g0194551 Lupinus albus HOM05D006268 ORTHO05D008118 1.4e-48 196.8 171 60.2
QL04p024264 Quercus lobata HOM05D006268 ORTHO05D008118 2.4e-48 196.1 195 56.4
Thecc.03G001300 Theobroma cacao HOM05D006268 ORTHO05D008118 4.1e-48 195.3 165 64.2
Ah.06g189690 Amaranthus hybridus HOM05D006268 ORTHO05D008118 5.3e-48 194.9 173 61.8
Psat4g207400 Pisum sativum HOM05D006268 ORTHO05D008118 7.0e-48 194.5 171 60.2
Sc26g0001930 Simmondsia chinensis HOM05D006268 ORTHO05D008118 9.1e-48 194.1 159 62.3
Gorai.N008000 Gossypium raimondii HOM05D006268 ORTHO05D008118 1.2e-47 193.7 173 59.5
ATR0049G059 Amborella trichopoda HOM05D006268 ORTHO05D008118 3.5e-47 192.2 162 59.9
Phvul.010G033866 Phaseolus vulgaris HOM05D006268 ORTHO05D008118 3.5e-47 192.2 170 58.8
VMungo0331G0592 Vigna mungo HOM05D006268 ORTHO05D008118 7.7e-47 191.0 170 57.6
Duzib128G0100 Durio zibethinus HOM05D006268 ORTHO05D008118 1.7e-46 189.9 173 59.0
Medtr8g010550 Medicago truncatula HOM05D006268 ORTHO05D008118 6.5e-46 188.0 171 57.3
Atru.BG.53.p Acer truncatum HOM05D006268 ORTHO05D008118 3.2e-45 185.7 157 64.3
unitig_22.g5778 Utricularia gibba HOM05D006268 ORTHO05D008118 1.6e-44 183.3 162 59.9
AL8G34320 Arabidopsis lyrata HOM05D006268 ORTHO05D008118 3.6e-44 182.2 177 56.5
AT5G58220 Arabidopsis thaliana HOM05D006268 ORTHO05D008118 1.0e-43 180.6 177 55.4
CSS0033423 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 4.0e-43 178.7 167 59.3
CDE04G2879 Ceratophyllum demersum HOM05D006268 ORTHO05D008118 2.0e-42 176.4 163 55.8
Zm00001eb392560 Zea mays HOM05D006268 ORTHO05D008118 5.7e-42 174.9 167 55.7
HPP92_028001 Vanilla planifolia HOM05D006268 ORTHO05D008118 1.7e-41 173.3 162 54.3
SEGI_16160 Sequoiadendron giganteum HOM05D006268 ORTHO05D008118 2.2e-41 172.9 163 55.8
Aa31LG11G10 Aethionema arabicum HOM05D006268 ORTHO05D008118 3.7e-41 172.2 162 56.8
Os03g0390700 Oryza sativa ssp. japonica HOM05D006268 ORTHO05D008118 6.3e-41 171.4 181 53.0
Thhalv10014126m.g Eutrema salsugineum HOM05D006268 ORTHO05D008118 8.2e-41 171.0 179 54.2
CARHR272020 Cardamine hirsuta HOM05D006268 ORTHO05D008118 1.4e-40 170.2 181 52.5
Sp6g19880 Schrenkiella parvula HOM05D006268 ORTHO05D008118 1.8e-40 169.9 163 54.0
TPR.G9770 Trifolium pratense HOM05D006268 ORTHO05D008118 3.1e-40 169.1 165 52.1
BcaB05g22409 Brassica carinata HOM05D006268 ORTHO05D008118 5.3e-40 168.3 163 55.2
BraA02t05859Z Brassica rapa HOM05D006268 ORTHO05D008118 2.7e-39 166.0 173 54.3
C02p13500 Brassica napus HOM05D006268 ORTHO05D008118 4.5e-39 165.2 179 53.1
BolC2t07462H Brassica oleracea HOM05D006268 ORTHO05D008118 4.5e-39 165.2 179 53.1
BcaC03g14111 Brassica carinata HOM05D006268 ORTHO05D008118 2.2e-38 162.9 173 53.8
A02p07860 Brassica napus HOM05D006268 ORTHO05D008118 2.9e-38 162.5 157 56.7
Carub.0008s1876 Capsella rubella HOM05D006268 ORTHO05D008118 3.8e-38 162.2 163 55.2
ClCG05G002670 Citrullus lanatus HOM05D006268 ORTHO05D008118 5.0e-38 161.8 167 55.1
SMO367G0371 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 9.4e-37 157.5 159 50.3
THA.LOC104799599 Tarenaya hassleriana HOM05D006268 ORTHO05D008118 2.1e-36 156.4 164 52.4
Mapoly0090s0043 Marchantia polymorpha HOM05D006268 ORTHO05D008118 1.8e-35 153.3 154 52.6
AagrBONN_evm.TU.Sc2ySwM_228.2734 Anthoceros agrestis HOM05D006268 ORTHO05D008118 4.0e-35 152.1 153 50.3
Pp3c4_10360 Physcomitrium patens HOM05D006268 ORTHO05D008118 3.7e-33 145.6 157 52.2
SMO197G0011 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 2.0e-31 139.8 149 49.7
Cpa.g.sc74.89 Carica papaya HOM05D006268 ORTHO05D008118 3.5e-31 139.0 158 51.9
SMO367G0431 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 3.5e-31 139.0 160 46.2
CBR_g30589 Chara braunii HOM05D006268 ORTHO05D008118 3.8e-30 135.6 164 46.3
Cre17.g735950 Chlamydomonas reinhardtii HOM05D006268 ORTHO05D008118 1.2e-28 130.6 172 43.6
arahy.Tifrunner.gnm1.ann1.EHLP6C Arachis hypogaea HOM05D006268 ORTHO05D008118 2.8e-28 129.4 168 48.8
arahy.Tifrunner.gnm1.ann1.V3PJPX Arachis hypogaea HOM05D006268 ORTHO05D008118 6.1e-28 128.3 168 48.2
MCO07G440 Micromonas commoda HOM05D006268 ORTHO05D008118 5.7e-26 121.7 161 42.9
PRCOL_00004243 Prasinoderma coloniale HOM05D006268 ORTHO05D008118 8.3e-25 117.9 164 39.6
FAN10G2079 Fragaria x ananassa HOM05D006268 ORTHO05D008118 2.4e-24 116.3 145 48.3
SGA_v2.0_scaffold95G28736 Striga asiatica HOM05D006268 ORTHO05D008118 2.7e-23 112.8 66 78.8
Oeu050272.1 Olea europaea HOM05D006268 ORTHO05D008118 1.6e-12 77.0 74 55.4
Hma1.2p1_0076F.1_g039600 Hydrangea macrophylla HOM05D006268 ORTHO05D008118 4.4e-10 68.9 63 54.0
Dinv43550 Davidia involucrata HOM05D006268 ORTHO05D008118 1.3e-09 67.4 41 82.9
MD02G1236900 Malus domestica HOM05D006268 ORTHO05D008118 3.9e-06 55.8 42 66.7


User provided reference genes

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