Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_025000 Daucus carota HOM05D003719 ORTHO05D004116 7.4e-209 730.7 492 100.0
DCAR_015727 Daucus carota HOM05D003719 ORTHO05D004116 5.0e-72 276.2 623 34.5
Dinv43515 Davidia involucrata HOM05D003719 ORTHO05D004116 2.6e-44 184.1 459 34.2
Actinidia05832 Actinidia chinensis HOM05D003719 ORTHO05D004116 4.7e-38 163.3 464 32.1
Actinidia31730 Actinidia chinensis HOM05D003719 ORTHO05D004116 1.2e-36 158.7 461 30.6
Dinv43958 Davidia involucrata HOM05D003719 ORTHO05D004116 9.2e-34 149.1 477 30.0
Hma1.2p1_0128F.1_g060060 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 3.5e-33 147.1 463 28.9
Rhsim07G0047900 Rhododendron simsii HOM05D003719 ORTHO05D004116 2.9e-32 144.1 489 30.3
Oeu034882.1 Olea europaea HOM05D003719 ORTHO05D004116 1.5e-31 141.7 259 39.0
Eucgr.E01743 Eucalyptus grandis HOM05D003719 ORTHO05D004116 3.3e-31 140.6 92 78.3
Haze_15777 Corylus avellana HOM05D003719 ORTHO05D004116 6.2e-30 136.3 453 29.1
GSVIVG01019328001 Vitis vinifera HOM05D003719 ORTHO05D004116 6.2e-30 136.3 234 40.2
MBI04_g06283_MAGBIO Magnolia biondii HOM05D003719 ORTHO05D004116 1.8e-29 134.8 227 40.1
TAR629G0070 Trochodendron aralioides HOM05D003719 ORTHO05D004116 1.8e-29 134.8 185 49.7
Cpa.g.sc73.30 Carica papaya HOM05D003719 ORTHO05D004116 3.1e-29 134.0 175 46.9
PGR042G1172 Punica granatum HOM05D003719 ORTHO05D004116 1.2e-28 132.1 98 64.3
Manes.09G133700 Manihot esculenta HOM05D003719 ORTHO05D004116 2.0e-28 131.3 206 43.7
THA.LOC104827246 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 2.0e-28 131.3 113 58.4
Sopen10g009690 Solanum pennellii HOM05D003719 ORTHO05D004116 2.6e-28 131.0 147 51.7
Thecc.05G235300 Theobroma cacao HOM05D003719 ORTHO05D004116 2.6e-28 131.0 236 38.6
Manes.08G156200 Manihot esculenta HOM05D003719 ORTHO05D004116 3.4e-28 130.6 179 48.6
Solyc10g024470.3 Solanum lycopersicum HOM05D003719 ORTHO05D004116 7.5e-28 129.4 147 51.0
Duzib128G0107 Durio zibethinus HOM05D003719 ORTHO05D004116 1.7e-27 128.3 188 43.1
Nitab4.5_0000792g0110 Nicotiana tabacum HOM05D003719 ORTHO05D004116 1.7e-27 128.3 228 38.6
QL04p053441 Quercus lobata HOM05D003719 ORTHO05D004116 2.2e-27 127.9 140 54.3
Migut.N01648 Erythranthe guttata HOM05D003719 ORTHO05D004116 2.9e-27 127.5 266 36.1
Nitab4.5_0000050g0180 Nicotiana tabacum HOM05D003719 ORTHO05D004116 3.7e-27 127.1 497 26.8
Duzib177G0203 Durio zibethinus HOM05D003719 ORTHO05D004116 4.9e-27 126.7 209 42.6
Gohir.A11G301800 Gossypium hirsutum HOM05D003719 ORTHO05D004116 4.9e-27 126.7 246 39.8
Lj9A617T60 Lonicera japonica HOM05D003719 ORTHO05D004116 4.9e-27 126.7 189 45.0
CiPaw.02G047600 Carya illinoinensis HOM05D003719 ORTHO05D004116 6.4e-27 126.3 195 40.5
Nn1g09363 Nelumbo nucifera HOM05D003719 ORTHO05D004116 1.1e-26 125.6 215 42.8
PSO170G0628 Papaver somniferum HOM05D003719 ORTHO05D004116 1.1e-26 125.6 98 65.3
THA.LOC104820814 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 1.1e-26 125.6 218 41.3
THA.LOC104802889 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 1.4e-26 125.2 164 48.2
Sp6g26530 Schrenkiella parvula HOM05D003719 ORTHO05D004116 1.9e-26 124.8 186 44.6
TWI60G0027 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 1.9e-26 124.8 106 62.3
Gorai.007G347200 Gossypium raimondii HOM05D003719 ORTHO05D004116 2.4e-26 124.4 243 39.1
Nitab4.5_0025236g0010 Nicotiana tabacum HOM05D003719 ORTHO05D004116 2.4e-26 124.4 234 38.0
AT5G17690 Arabidopsis thaliana HOM05D003719 ORTHO05D004116 3.2e-26 124.0 220 42.7
MSTRG.4990 Avicennia marina HOM05D003719 ORTHO05D004116 3.2e-26 124.0 191 38.7
Gohir.D11G317400 Gossypium hirsutum HOM05D003719 ORTHO05D004116 3.2e-26 124.0 243 39.1
CANSAT25G2268 Cannabis sativa HOM05D003719 ORTHO05D004116 5.4e-26 123.2 197 40.1
Potri.019G044400 Populus trichocarpa HOM05D003719 ORTHO05D004116 7.0e-26 122.9 234 39.7
Migut.O00699 Erythranthe guttata HOM05D003719 ORTHO05D004116 9.2e-26 122.5 135 51.9
Potri.013G070400 Populus trichocarpa HOM05D003719 ORTHO05D004116 9.2e-26 122.5 259 34.4
PSO017G6528 Papaver somniferum HOM05D003719 ORTHO05D004116 1.2e-25 122.1 135 51.9
PGSC0003DMG400031514 Solanum tuberosum HOM05D003719 ORTHO05D004116 2.7e-25 120.9 184 42.9
TWI32G1338 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 2.7e-25 120.9 97 61.9
AL6G28780 Arabidopsis lyrata HOM05D003719 ORTHO05D004116 3.5e-25 120.6 178 47.2
HanXRQChr04g0117621 Helianthus annuus HOM05D003719 ORTHO05D004116 3.5e-25 120.6 240 34.6
Sabra13G0061200 Salix brachista HOM05D003719 ORTHO05D004116 3.5e-25 120.6 230 39.1
DCAR_029570 Daucus carota HOM05D003719 ORTHO05D004116 4.6e-25 120.2 220 37.7
MD07G1081800 Malus domestica HOM05D003719 ORTHO05D004116 4.6e-25 120.2 194 41.8
Sabra19G0054700 Salix brachista HOM05D003719 ORTHO05D004116 1.3e-24 118.6 234 39.7
PGSC0003DMG400031112 Solanum tuberosum HOM05D003719 ORTHO05D004116 1.7e-24 118.2 77 67.5
Peaxi162Scf00245g00417 Petunia axillaris HOM05D003719 ORTHO05D004116 3.0e-24 117.5 504 27.4
Thhalv10013571m.g Eutrema salsugineum HOM05D003719 ORTHO05D004116 3.9e-24 117.1 187 44.9
Glyma.04G002100 Glycine max HOM05D003719 ORTHO05D004116 3.9e-24 117.1 109 55.0
Glyma.06G001700 Glycine max HOM05D003719 ORTHO05D004116 3.9e-24 117.1 108 57.4
Aa31LG11G11940 Aethionema arabicum HOM05D003719 ORTHO05D004116 5.0e-24 116.7 84 70.2
BcaB08g36751 Brassica carinata HOM05D003719 ORTHO05D004116 5.0e-24 116.7 106 62.3
Hund17170 Selenicereus undatus HOM05D003719 ORTHO05D000105 5.0e-24 116.7 180 39.4
Ah.05g177100 Amaranthus hybridus HOM05D003719 ORTHO05D004116 6.6e-24 116.3 117 54.7
Oeu045633.2 Olea europaea HOM05D003719 ORTHO05D004116 6.6e-24 116.3 240 36.2
FvH4_7g08280 Fragaria vesca HOM05D003719 ORTHO05D004116 8.6e-24 115.9 175 41.1
Cc02_g26500 Coffea canephora HOM05D003719 ORTHO05D004116 1.1e-23 115.5 252 36.1
Glyma.03G094200 Glycine max HOM05D003719 ORTHO05D004116 1.1e-23 115.5 70 72.9
Sed0012975 Sechium edule HOM05D003719 ORTHO05D004116 1.1e-23 115.5 110 56.4
Sc02g0003460 Simmondsia chinensis HOM05D003719 ORTHO05D004116 1.1e-23 115.5 87 65.5
HPP92_020485 Vanilla planifolia HOM05D003719 ORTHO05D004116 1.1e-23 115.5 166 43.4
CsaV3_6G006350 Cucumis sativus L. HOM05D003719 ORTHO05D004116 1.5e-23 115.2 181 41.4
Glyma.16G079900 Glycine max HOM05D003719 ORTHO05D004116 1.5e-23 115.2 77 67.5
Oeu024948.1 Olea europaea HOM05D003719 ORTHO05D004116 1.5e-23 115.2 213 38.0
arahy.Tifrunner.gnm1.ann1.N569AS Arachis hypogaea HOM05D003719 ORTHO05D004116 1.9e-23 114.8 85 65.9
arahy.Tifrunner.gnm1.ann1.U92JU2 Arachis hypogaea HOM05D003719 ORTHO05D004116 2.5e-23 114.4 70 72.9
EL10Ac1g00661 Beta vulgaris HOM05D003719 ORTHO05D004116 2.5e-23 114.4 95 62.1
CDE11G0837 Ceratophyllum demersum HOM05D003719 ORTHO05D004116 2.5e-23 114.4 224 35.3
ClCG06G000580 Citrullus lanatus HOM05D003719 ORTHO05D004116 2.5e-23 114.4 181 42.5
MD02G1231000 Malus domestica HOM05D003719 ORTHO05D004116 2.5e-23 114.4 464 28.4
Phvul.010G034600 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 3.3e-23 114.0 88 65.9
CARHR195490 Cardamine hirsuta HOM05D003719 ORTHO05D004116 4.3e-23 113.6 190 43.2
Oeu020240.1 Olea europaea HOM05D003719 ORTHO05D004116 4.3e-23 113.6 433 26.8
Phvul.009G117500 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 4.3e-23 113.6 70 72.9
BcaC03g13534 Brassica carinata HOM05D003719 ORTHO05D004116 5.6e-23 113.2 92 63.0
RcHm_v2.0_Chr1g0340791 Rosa chinensis HOM05D003719 ORTHO05D004116 5.6e-23 113.2 446 26.5
Carub.0006s1593 Capsella rubella HOM05D003719 ORTHO05D004116 7.3e-23 112.8 186 45.2
MELO3C022484.2 Cucumis melo HOM05D003719 ORTHO05D004116 9.5e-23 112.5 181 40.9
Nn7g37398 Nelumbo nucifera HOM05D003719 ORTHO05D004116 9.5e-23 112.5 64 79.7
Sopen01g033060 Solanum pennellii HOM05D003719 ORTHO05D004116 1.2e-22 112.1 155 44.5
A02p04380 Brassica napus HOM05D003719 ORTHO05D004116 1.6e-22 111.7 120 53.3
BraA02t05402Z Brassica rapa HOM05D003719 ORTHO05D004116 1.6e-22 111.7 120 53.3
Solyc01g081500.4 Solanum lycopersicum HOM05D003719 ORTHO05D004116 2.1e-22 111.3 192 41.1
BolC2t06833H Brassica oleracea HOM05D003719 ORTHO05D004116 4.7e-22 110.2 121 52.1
Glyma.03G111600 Glycine max HOM05D003719 ORTHO05D004116 4.7e-22 110.2 68 70.6
Os10g0324900 Oryza sativa ssp. japonica HOM05D003719 ORTHO05D004116 8.1e-22 109.4 88 60.2
HanXRQChr11g0343451 Helianthus annuus HOM05D003719 ORTHO05D004116 1.1e-21 109.0 151 46.4
BcaC04g18768 Brassica carinata HOM05D003719 ORTHO05D004116 1.4e-21 108.6 74 71.6
A10p21730 Brassica napus HOM05D003719 ORTHO05D004116 1.4e-21 108.6 74 71.6
C09p59480 Brassica napus HOM05D003719 ORTHO05D004116 1.4e-21 108.6 74 71.6
BolC9t58786H Brassica oleracea HOM05D003719 ORTHO05D004116 1.4e-21 108.6 74 71.6
BraA10t44234Z Brassica rapa HOM05D003719 ORTHO05D004116 1.4e-21 108.6 74 71.6
TPR.G38555 Trifolium pratense HOM05D001257 ORTHO05D005285 1.4e-21 108.6 111 54.1
Atru.chr2.1627 Acer truncatum HOM05D003719 ORTHO05D004116 1.8e-21 108.2 213 38.5
Sed0017190 Sechium edule HOM05D003719 ORTHO05D004116 1.8e-21 108.2 95 56.8
Ciclev10031549m.g Citrus clementina HOM05D003719 ORTHO05D004116 2.3e-21 107.8 201 37.8
ECA236G3956 Erigeron canadensis HOM05D001257 ORTHO05D005285 2.3e-21 107.8 228 32.5
C02p09250 Brassica napus HOM05D003719 ORTHO05D004116 3.1e-21 107.5 171 45.0
VMungo0331G0617 Vigna mungo HOM05D003719 ORTHO05D004116 4.0e-21 107.1 248 34.3
BraA09t37591Z Brassica rapa HOM05D003719 ORTHO05D004116 1.5e-20 105.1 94 59.6
BraA09t38097Z Brassica rapa HOM05D003719 ORTHO05D004116 1.5e-20 105.1 94 59.6
ClCG05G002450 Citrullus lanatus HOM05D003719 ORTHO05D004116 2.6e-20 104.4 153 40.5
unitig_0.g1580 Utricularia gibba HOM05D003719 ORTHO05D004116 5.8e-20 103.2 73 64.4
ATR0568G049 Amborella trichopoda HOM05D003719 ORTHO05D004116 7.5e-20 102.8 153 45.8
Psat5g001120 Pisum sativum HOM05D003719 ORTHO05D004116 2.2e-19 101.3 61 72.1
Aqoxy7G02508 Aquilegia oxysepala HOM05D003719 ORTHO05D004116 2.9e-19 100.9 179 40.8
SHI54853 Sapria himalayana HOM05D003719 ORTHO05D004116 2.9e-19 100.9 185 38.9
Sed0010466 Sechium edule HOM05D003719 ORTHO05D004116 4.9e-19 100.1 203 35.0
SGA_v2.0_scaffold95G28748 Striga asiatica HOM05D003719 ORTHO05D004116 4.9e-19 100.1 272 33.8
Lsat_1_v5_gn_7_34101 Lactuca sativa HOM05D003719 ORTHO05D004116 8.3e-19 99.4 243 35.4
ECA248G2234 Erigeron canadensis HOM05D003719 ORTHO05D004116 3.2e-18 97.4 85 55.3
FAN06G0622 Fragaria x ananassa HOM05D003719 ORTHO05D004116 3.2e-18 97.4 193 36.8
VMungo1309G0350 Vigna mungo HOM05D003719 ORTHO05D004116 4.1e-18 97.1 108 49.1
FAN10G3972 Fragaria x ananassa HOM05D003719 ORTHO05D004116 7.1e-18 96.3 189 38.6
Psat4g207560 Pisum sativum HOM05D003719 ORTHO05D004116 7.1e-18 96.3 78 55.1
Lj3g0017682 Lotus japonicus HOM05D003719 ORTHO05D004116 1.2e-17 95.5 179 38.5
SEGI_28532 Sequoiadendron giganteum HOM05D003719 ORTHO05D004116 1.2e-17 95.5 56 64.3
CsaV3_3G009890 Cucumis sativus L. HOM05D002544 ORTHO05D007277 1.6e-17 95.1 136 40.4
HanXRQChr04g0117671 Helianthus annuus HOM05D003719 ORTHO05D004116 3.5e-17 94.0 82 48.8
Oeu032776.1 Olea europaea HOM05D003719 ORTHO05D004116 3.5e-17 94.0 258 30.6
PSO170G3936 Papaver somniferum HOM05D033783 ORTHO05D004116 4.6e-17 93.6 228 33.3
Lalb_Chr07g0194591 Lupinus albus HOM05D003719 ORTHO05D004116 1.0e-16 92.4 62 62.9
Mapoly0009s0028 Marchantia polymorpha HOM05D003719 ORTHO05D004116 1.0e-16 92.4 83 53.0
Nitab4.5_0003123g0030 Nicotiana tabacum HOM05D003719 ORTHO05D004116 1.3e-16 92.0 520 25.2
BcaB01g05152 Brassica carinata HOM05D003719 ORTHO05D004116 1.7e-16 91.7 77 58.4
BolC3t13474H Brassica oleracea HOM05D003719 ORTHO05D004116 1.7e-16 91.7 77 58.4
Lsat_1_v5_gn_1_89600 Lactuca sativa HOM05D003719 ORTHO05D004116 1.7e-16 91.7 234 31.6
PSO017G2223 Papaver somniferum HOM05D003719 ORTHO05D004116 1.7e-16 91.7 143 39.9
PSO675G5773 Papaver somniferum HOM05D003719 ORTHO05D004116 1.7e-16 91.7 74 58.1
Hma1.2p1_0462F.1_g158020 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 2.3e-16 91.3 412 26.9
Lalb_Chr23g0264911 Lupinus albus HOM05D003719 ORTHO05D004116 2.3e-16 91.3 215 32.6
Lalb_Chr13g0290971 Lupinus albus HOM05D003719 ORTHO05D004116 3.0e-16 90.9 61 65.6
Ca_23168_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 8.6e-16 89.4 210 31.0
PSO017G2979 Papaver somniferum HOM05D033783 ORTHO05D004116 1.1e-15 89.0 218 29.8
TPR.G9787 Trifolium pratense HOM05D003719 ORTHO05D004116 1.1e-15 89.0 285 28.8
A03p08460 Brassica napus HOM05D003719 ORTHO05D004116 1.9e-15 88.2 114 46.5
BraA03t10169Z Brassica rapa HOM05D003719 ORTHO05D004116 1.9e-15 88.2 114 46.5
PSO017G0756 Papaver somniferum HOM05D003719 ORTHO05D004116 1.9e-15 88.2 71 57.7
PSO732G0471 Papaver somniferum HOM05D003719 ORTHO05D004116 3.3e-15 87.4 190 36.8
PSO732G0498 Papaver somniferum HOM05D003719 ORTHO05D004116 3.3e-15 87.4 190 36.8
PSO732G0548 Papaver somniferum HOM05D003719 ORTHO05D004116 7.3e-15 86.3 190 36.3
SEGI_39270 Sequoiadendron giganteum HOM05D003719 ORTHO05D004116 9.5e-15 85.9 66 54.5
Lalb_Chr10g0091841 Lupinus albus HOM05D003719 ORTHO05D004116 1.2e-14 85.5 60 60.0
Pp3c9_6410 Physcomitrium patens HOM05D003719 ORTHO05D004116 1.2e-14 85.5 112 39.3
Lalb_Chr13g0290921 Lupinus albus HOM05D003719 ORTHO05D004116 3.6e-14 84.0 167 34.7
Lalb_Chr12g0210141 Lupinus albus HOM05D003719 ORTHO05D004116 4.7e-14 83.6 116 43.1
FAN01G0294 Fragaria x ananassa HOM05D003719 ORTHO05D004116 1.1e-13 82.4 197 33.0
BcaB01g04909 Brassica carinata HOM05D003719 ORTHO05D004116 2.3e-13 81.3 136 40.4
Mapoly0010s0167 Marchantia polymorpha HOM05D003719 ORTHO05D004116 3.1e-13 80.9 179 30.7
PSO349G0045 Papaver somniferum HOM05D003719 ORTHO05D004116 4.0e-13 80.5 142 36.6
Mapoly0024s0010 Marchantia polymorpha HOM05D003719 ORTHO05D004116 5.2e-13 80.1 176 33.0
Peaxi162Scf00907g00023 Petunia axillaris HOM05D003719 ORTHO05D004116 1.2e-12 79.0 219 32.4
vmacro13601 Vaccinium macrocarpon HOM05D003719 ORTHO05D004116 3.2e-10 70.9 438 24.4
PSO732G0588 Papaver somniferum HOM05D003719 ORTHO05D004116 2.7e-09 67.8 61 50.8
Prupe.2G107000 Prunus persica HOM05D003719 ORTHO05D004116 1.3e-08 65.5 428 25.2
arahy.Tifrunner.gnm1.ann1.RGD672 Arachis hypogaea HOM05D022377 ORTHO05D004116 1.7e-08 65.1 85 35.3
arahy.Tifrunner.gnm1.ann1.FLAY3S Arachis hypogaea HOM05D003719 ORTHO05D004116 2.3e-08 64.7 65 40.0
AUR62038028 Chenopodium quinoa HOM05D003719 ORTHO05D004116 3.0e-08 64.3 154 34.4
Aqoxy7G02797 Aquilegia oxysepala HOM05D003719 ORTHO05D004116 5.1e-08 63.5 66 42.4
AUR62014507 Chenopodium quinoa HOM05D003719 ORTHO05D004116 6.6e-08 63.2 154 35.1
Ca_15283_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 1.5e-07 62.0 207 30.4
Ca_15419_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 1.5e-07 62.0 207 30.4
TPR.G9173 Trifolium pratense HOM05D000004 ORTHO05D000002 1.5e-07 62.0 52 51.9
arahy.Tifrunner.gnm1.ann1.SX0HJ3 Arachis hypogaea HOM05D022377 ORTHO05D004116 1.9e-07 61.6 78 37.2
C03p09860 Brassica napus HOM05D003719 ORTHO05D004116 1.9e-07 61.6 171 33.3
Hund26916 Selenicereus undatus HOM05D003719 ORTHO05D004116 7.3e-07 59.7 166 31.9
Ah.05g177090 Amaranthus hybridus HOM05D000308 ORTHO05D005285 2.1e-06 58.2 53 54.7
arahy.Tifrunner.gnm1.ann1.ACR8J8 Arachis hypogaea HOM05D022377 ORTHO05D004116 2.1e-06 58.2 85 31.8
TPR.G39891 Trifolium pratense HOM05D003719 ORTHO05D004116 8.1e-06 56.2 56 48.2


User provided reference genes

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