Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022842 Daucus carota HOM05D005328 ORTHO05D006049 1.1e-115 420.2 249 100.0
Dinv04372 Davidia involucrata HOM05D005328 ORTHO05D006049 7.6e-37 158.3 261 48.7
CSS0022453 Camellia sinensis var. sinensis HOM05D005328 ORTHO05D006049 2.9e-36 156.4 260 55.0
Actinidia02271 Actinidia chinensis HOM05D005328 ORTHO05D006049 2.4e-30 136.7 212 48.1
FAN07G1972 Fragaria x ananassa HOM05D005328 ORTHO05D006049 1.3e-28 131.0 131 61.8
FAN22G2230 Fragaria x ananassa HOM05D005328 ORTHO05D006049 1.3e-28 131.0 109 70.6
Rhsim13G0137800 Rhododendron simsii HOM05D005328 ORTHO05D006049 1.7e-28 130.6 219 47.0
PGR042G0801 Punica granatum HOM05D005328 ORTHO05D006049 2.2e-28 130.2 199 49.7
Potri.006G000200 Populus trichocarpa HOM05D005328 ORTHO05D006049 5.0e-28 129.0 182 49.5
Glyma.15G123900 Glycine max HOM05D005328 ORTHO05D006049 1.1e-27 127.9 214 44.4
Oeu016925.1 Olea europaea HOM05D005328 ORTHO05D006049 1.4e-27 127.5 183 51.4
FAN17G2578 Fragaria x ananassa HOM05D005328 ORTHO05D006049 1.9e-27 127.1 131 60.3
Phvul.006G134100 Phaseolus vulgaris HOM05D005328 ORTHO05D006049 1.9e-27 127.1 194 47.4
FvH4_4g13451 Fragaria vesca HOM05D005328 ORTHO05D006049 3.2e-27 126.3 131 59.5
FAN12G3626 Fragaria x ananassa HOM05D005328 ORTHO05D006049 3.2e-27 126.3 131 59.5
Cc09_g00040 Coffea canephora HOM05D005328 ORTHO05D006049 4.2e-27 125.9 197 48.7
Hma1.2p1_0391F.1_g142830 Hydrangea macrophylla HOM05D005328 ORTHO05D006049 4.2e-27 125.9 210 49.0
Atru.chr1.2204 Acer truncatum HOM05D005328 ORTHO05D006049 9.4e-27 124.8 232 43.5
Gohir.A02G007200 Gossypium hirsutum HOM05D005328 ORTHO05D006049 9.4e-27 124.8 194 50.0
RcHm_v2.0_Chr4g0414011 Rosa chinensis HOM05D005328 ORTHO05D006049 9.4e-27 124.8 124 62.9
TAR626G1462 Trochodendron aralioides HOM05D005328 ORTHO05D006049 9.4e-27 124.8 203 47.3
GSVIVG01018754001 Vitis vinifera HOM05D005328 ORTHO05D006049 1.2e-26 124.4 107 70.1
Gohir.D02G007001 Gossypium hirsutum HOM05D005328 ORTHO05D006049 1.6e-26 124.0 199 50.3
PGSC0003DMG400003630 Solanum tuberosum HOM05D005328 ORTHO05D006049 3.6e-26 122.9 99 72.7
Lj6g0010372 Lotus japonicus HOM05D005328 ORTHO05D006049 6.1e-26 122.1 260 46.5
COL.COLO4_12851 Corchorus olitorius HOM05D005328 ORTHO05D006049 1.0e-25 121.3 148 55.4
Gorai.005G008200 Gossypium raimondii HOM05D005328 ORTHO05D006049 1.0e-25 121.3 154 56.5
MD04G1014200 Malus domestica HOM05D005328 ORTHO05D006049 1.4e-25 120.9 109 67.0
Sopen02g029040 Solanum pennellii HOM05D005328 ORTHO05D006049 1.4e-25 120.9 98 70.4
Manes.03G095600 Manihot esculenta HOM05D005328 ORTHO05D006049 1.8e-25 120.6 242 40.9
Hund04726 Selenicereus undatus HOM05D005328 ORTHO05D006049 2.3e-25 120.2 144 56.9
Peaxi162Scf00083g00091 Petunia axillaris HOM05D005328 ORTHO05D006049 3.0e-25 119.8 127 59.1
Solyc02g084340.3 Solanum lycopersicum HOM05D005328 ORTHO05D006049 3.9e-25 119.4 98 70.4
unitig_748.g7855 Utricularia gibba HOM05D005328 ORTHO05D006049 3.9e-25 119.4 188 47.9
Ah.07g207330 Amaranthus hybridus HOM05D005328 ORTHO05D002024 6.7e-25 118.6 108 68.5
Duzib151G0457 Durio zibethinus HOM05D005328 ORTHO05D006049 6.7e-25 118.6 188 49.5
CAN.G2049.4 Capsicum annuum HOM05D005328 ORTHO05D006049 1.1e-24 117.9 144 54.9
Cpa.g.sc53.124 Carica papaya HOM05D005328 ORTHO05D006049 1.5e-24 117.5 198 46.5
Ca_00786_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 2.0e-24 117.1 165 47.3
Ca_11373_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 2.0e-24 117.1 165 47.3
Migut.M01485 Erythranthe guttata HOM05D005328 ORTHO05D006049 2.0e-24 117.1 163 48.5
Thecc.04G160200 Theobroma cacao HOM05D005328 ORTHO05D006049 2.6e-24 116.7 250 47.2
Eucgr.E04239 Eucalyptus grandis HOM05D005328 ORTHO05D006049 4.4e-24 115.9 219 42.9
AUR62021212 Chenopodium quinoa HOM05D005328 ORTHO05D006049 7.4e-24 115.2 109 67.0
ECA234G3238 Erigeron canadensis HOM05D005328 ORTHO05D006049 7.4e-24 115.2 151 53.6
TPR.G10498 Trifolium pratense HOM05D005328 ORTHO05D006049 7.4e-24 115.2 145 50.3
Ciclev10015350m.g Citrus clementina HOM05D005328 ORTHO05D006049 9.7e-24 114.8 220 43.6
Nitab4.5_0005721g0030 Nicotiana tabacum HOM05D005328 ORTHO05D006049 9.7e-24 114.8 168 50.6
Aa31LG1G25860 Aethionema arabicum HOM05D005328 ORTHO05D006049 2.2e-23 113.6 228 41.2
Medtr2g028200 Medicago truncatula HOM05D005328 ORTHO05D006049 2.2e-23 113.6 114 62.3
HanXRQChr17g0558521 Helianthus annuus HOM05D005328 ORTHO05D006049 2.8e-23 113.2 107 63.6
TWI63G1825 Tripterygium wilfordii HOM05D005328 ORTHO05D006049 2.8e-23 113.2 229 41.9
Prupe.1G161500 Prunus persica HOM05D005328 ORTHO05D006049 3.7e-23 112.8 109 61.5
SEGI_06923 Sequoiadendron giganteum HOM05D005328 ORTHO05D006049 4.8e-23 112.5 105 63.8
arahy.Tifrunner.gnm1.ann1.QMQM64 Arachis hypogaea HOM05D005328 ORTHO05D006049 8.2e-23 111.7 110 64.5
VMungo0540G0318 Vigna mungo HOM05D005328 ORTHO05D006049 8.2e-23 111.7 206 43.7
Aqoxy6G01137 Aquilegia oxysepala HOM05D005328 ORTHO05D006049 1.4e-22 110.9 216 43.5
EL10Ac3g05669 Beta vulgaris HOM05D005328 ORTHO05D006049 1.8e-22 110.5 93 71.0
AT2G44200 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 2.4e-22 110.2 145 53.1
CARHR139360 Cardamine hirsuta HOM05D005328 ORTHO05D006049 2.4e-22 110.2 150 51.3
BcaB02g08879 Brassica carinata HOM05D005328 ORTHO05D006049 3.1e-22 109.8 151 52.3
BcaC02g12330 Brassica carinata HOM05D005328 ORTHO05D006049 5.3e-22 109.0 152 52.6
Sed0006700 Sechium edule HOM05D005328 ORTHO05D006049 5.3e-22 109.0 194 41.2
AUR62016004 Chenopodium quinoa HOM05D005328 ORTHO05D006049 7.0e-22 108.6 163 50.9
AL4G43160 Arabidopsis lyrata HOM05D005328 ORTHO05D006049 9.1e-22 108.2 149 51.7
A03p24730 Brassica napus HOM05D005328 ORTHO05D006049 1.2e-21 107.8 149 49.0
BraA03t11679Z Brassica rapa HOM05D005328 ORTHO05D006049 1.2e-21 107.8 149 49.0
BcaC01g05181 Brassica carinata HOM05D005328 ORTHO05D006049 1.5e-21 107.5 145 49.7
C03p29470 Brassica napus HOM05D005328 ORTHO05D006049 1.5e-21 107.5 145 49.7
BolC3t15295H Brassica oleracea HOM05D005328 ORTHO05D006049 1.5e-21 107.5 145 49.7
C04p05070 Brassica napus HOM05D005328 ORTHO05D006049 2.6e-21 106.7 152 52.0
BraA05t19414Z Brassica rapa HOM05D005328 ORTHO05D006049 2.6e-21 106.7 152 52.0
THA.LOC104804861 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 2.6e-21 106.7 134 55.2
THA.LOC104807080 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 2.6e-21 106.7 134 55.2
arahy.Tifrunner.gnm1.ann1.B05UD4 Arachis hypogaea HOM05D005328 ORTHO05D006049 3.4e-21 106.3 118 60.2
Lsat_1_v5_gn_4_65161 Lactuca sativa HOM05D005328 ORTHO05D006049 3.4e-21 106.3 206 40.8
SGA_v2.0_scaffold7G03648 Striga asiatica HOM05D005328 ORTHO05D006049 3.4e-21 106.3 227 41.9
A05p04290 Brassica napus HOM05D005328 ORTHO05D006049 7.7e-21 105.1 162 50.0
CiPaw.10G085200 Carya illinoinensis HOM05D005328 ORTHO05D006049 1.3e-20 104.4 141 53.9
BcaB01g03324 Brassica carinata HOM05D005328 ORTHO05D006049 6.5e-20 102.1 106 62.3
Lalb_Chr15g0088491 Lupinus albus HOM05D005328 ORTHO05D006049 6.5e-20 102.1 264 37.9
Thhalv10001457m.g Eutrema salsugineum HOM05D005328 ORTHO05D006049 8.5e-20 101.7 125 55.2
Sc13g0008540 Simmondsia chinensis HOM05D005328 ORTHO05D006049 1.1e-19 101.3 213 40.4
Sp4g26280 Schrenkiella parvula HOM05D005328 ORTHO05D006049 1.4e-19 100.9 134 52.2
CDE03G0050 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 1.9e-19 100.5 113 52.2
Sabra06G0000700 Salix brachista HOM05D005328 ORTHO05D006049 4.2e-19 99.4 184 43.5
PSO170G6444 Papaver somniferum HOM05D005328 ORTHO05D006049 5.5e-19 99.0 144 47.9
PSO017G7149 Papaver somniferum HOM05D005328 ORTHO05D006049 1.6e-18 97.4 146 47.9
QL05p066147 Quercus lobata HOM05D005328 ORTHO05D006049 1.0e-17 94.7 183 40.4
SMO143G0138 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 1.8e-17 94.0 99 55.6
Zm00001eb034090 Zea mays HOM05D005328 ORTHO05D006049 1.8e-17 94.0 175 42.3
CDE06G0152 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 3.0e-17 93.2 124 48.4
Os08g0500200 Oryza sativa ssp. japonica HOM05D005328 ORTHO05D006049 3.0e-17 93.2 132 49.2
Prupe.1G161200 Prunus persica HOM05D005328 ORTHO05D006049 3.9e-17 92.8 109 56.9
Psat1g170800 Pisum sativum HOM05D005328 ORTHO05D006049 5.2e-17 92.4 145 46.2
Nitab4.5_0002880g0010 Nicotiana tabacum HOM05D005328 ORTHO05D006049 6.7e-17 92.0 130 52.3
vmacro03583 Vaccinium macrocarpon HOM05D005328 ORTHO05D006049 2.6e-16 90.1 166 44.6
HPP92_007484 Vanilla planifolia HOM05D005328 ORTHO05D006049 3.3e-16 89.7 189 43.4
SalBow8G1780 Salvia bowleyana HOM05D005328 ORTHO05D006049 9.7e-16 88.2 201 39.8
SMO117G0022 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 4.8e-15 85.9 99 50.5
ATR0751G111 Amborella trichopoda HOM05D005328 ORTHO05D006049 8.2e-15 85.1 180 43.9
Haze_07067 Corylus avellana HOM05D005328 ORTHO05D006049 2.4e-14 83.6 211 38.4
SMO114G0026 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 5.3e-14 82.4 123 43.9
SMO117G0350 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 9.1e-14 81.6 95 50.5
Nn1g08402 Nelumbo nucifera HOM05D005328 ORTHO05D006049 1.0e-12 78.2 194 37.6
SMO117G0182 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 1.7e-12 77.4 99 47.5
Pp3c3_9980 Physcomitrium patens HOM05D005328 ORTHO05D006049 4.2e-11 72.8 212 36.3
SMO117G0245 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 5.5e-11 72.4 93 44.1
Carub.0004s2678 Capsella rubella HOM05D005328 ORTHO05D006049 1.2e-10 71.2 149 42.3
Glyma.09G018000 Glycine max HOM05D005328 ORTHO05D006049 5.2e-09 65.9 124 42.7
Sabra16G0007800 Salix brachista HOM05D000040 ORTHO05D001305 3.3e-08 63.2 130 40.0
MELO3C017635.2 Cucumis melo HOM05D005328 ORTHO05D006049 8.2e-07 58.5 188 31.9
BcaB02g08878 Brassica carinata HOM05D005328 ORTHO05D006049 4.1e-06 56.2 101 43.6


User provided reference genes

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