Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_018572 Daucus carota HOM05D000732 ORTHO05D013253 8.0e-70 266.9 131 100.0
DCAR_031102 Daucus carota HOM05D000732 ORTHO05D007225 3.9e-24 115.2 146 49.3
Oeu056733.2 Olea europaea HOM05D000732 ORTHO05D007225 1.2e-12 77.0 134 39.6
CSS0045437 Camellia sinensis var. sinensis HOM05D000732 ORTHO05D007225 2.2e-11 72.8 76 51.3
Cc11_g14660 Coffea canephora HOM05D000732 ORTHO05D007225 3.8e-11 72.0 75 48.0
Dinv15302 Davidia involucrata HOM05D000732 ORTHO05D007225 6.5e-11 71.2 46 67.4
Rhsim12G0120000 Rhododendron simsii HOM05D000732 ORTHO05D007225 1.1e-10 70.5 77 48.1
RhsimUnG0193300 Rhododendron simsii HOM05D000732 ORTHO05D007225 1.1e-10 70.5 77 48.1
vmacro16252 Vaccinium macrocarpon HOM05D000732 ORTHO05D007225 1.1e-10 70.5 77 48.1
ECA233G2480 Erigeron canadensis HOM05D000732 ORTHO05D007225 1.9e-10 69.7 87 42.5
Medtr5g034370 Medicago truncatula HOM05D000732 ORTHO05D007225 1.9e-10 69.7 46 60.9
Nitab4.5_0000113g0290 Nicotiana tabacum HOM05D000732 ORTHO05D007225 3.2e-10 68.9 64 50.0
Nitab4.5_0002494g0010 Nicotiana tabacum HOM05D000732 ORTHO05D007225 3.2e-10 68.9 64 50.0
Glyma.01G031300 Glycine max HOM05D000732 ORTHO05D007225 4.2e-10 68.6 46 63.0
Glyma.02G034500 Glycine max HOM05D000732 ORTHO05D007225 4.2e-10 68.6 46 63.0
QL08p001505 Quercus lobata HOM05D000732 ORTHO05D013253 4.2e-10 68.6 72 48.6
QL08p001512 Quercus lobata HOM05D000732 ORTHO05D007225 4.2e-10 68.6 72 48.6
VMungo1215G1082 Vigna mungo HOM05D000732 ORTHO05D007225 4.2e-10 68.6 46 63.0
Lj3C1052T10 Lonicera japonica HOM05D000732 ORTHO05D007225 7.2e-10 67.8 75 50.7
TPR.G13569 Trifolium pratense HOM05D000732 ORTHO05D007225 7.2e-10 67.8 46 60.9
TWI36G1131 Tripterygium wilfordii HOM05D000732 ORTHO05D007225 7.2e-10 67.8 56 57.1
TAR680G0005 Trochodendron aralioides HOM05D000732 ORTHO05D007225 7.2e-10 67.8 76 50.0
TAR680G0006 Trochodendron aralioides HOM05D000732 ORTHO05D007225 7.2e-10 67.8 76 50.0
Duzib268G1676 Durio zibethinus HOM05D000732 ORTHO05D007225 9.3e-10 67.4 56 55.4
CANSAT01G2807 Cannabis sativa HOM05D000732 ORTHO05D007225 1.2e-09 67.0 75 52.0
Cfa009143 Carpinus fangiana HOM05D000732 ORTHO05D007225 1.2e-09 67.0 60 55.0
CiPaw.05G150800 Carya illinoinensis HOM05D000732 ORTHO05D007225 1.2e-09 67.0 70 51.4
RcHm_v2.0_Chr4g0443831 Rosa chinensis HOM05D000732 ORTHO05D007225 1.2e-09 67.0 73 47.9
Hund05994 Selenicereus undatus HOM05D000732 ORTHO05D007225 1.2e-09 67.0 65 46.2
GSVIVG01020241001 Vitis vinifera HOM05D000732 ORTHO05D007225 1.2e-09 67.0 56 55.4
MSTRG.7899 Avicennia marina HOM05D000732 ORTHO05D007225 2.1e-09 66.2 56 53.6
Ca_04598_v3 Cicer arietinum L. HOM05D000732 ORTHO05D007225 2.1e-09 66.2 46 60.9
Solyc05g005580.3 Solanum lycopersicum HOM05D000732 ORTHO05D007225 2.1e-09 66.2 66 48.5
Sopen05g001590 Solanum pennellii HOM05D000392 ORTHO05D000001 2.1e-09 66.2 66 48.5
Manes.12G029000 Manihot esculenta HOM05D000732 ORTHO05D007225 2.7e-09 65.9 56 51.8
Actinidia15046 Actinidia chinensis HOM05D000732 ORTHO05D007225 3.5e-09 65.5 75 46.7
COL.COLO4_36966 Corchorus olitorius HOM05D000732 ORTHO05D007225 3.5e-09 65.5 56 53.6
Haze_12177 Corylus avellana HOM05D000732 ORTHO05D007225 3.5e-09 65.5 60 53.3
Dinv24859 Davidia involucrata HOM05D000732 ORTHO05D007225 3.5e-09 65.5 70 50.0
Duzib248G1152 Durio zibethinus HOM05D000732 ORTHO05D007225 3.5e-09 65.5 56 53.6
TWI75G0496 Tripterygium wilfordii HOM05D000732 ORTHO05D007225 3.5e-09 65.5 72 48.6
CAN.G388.57 Capsicum annuum HOM05D000732 ORTHO05D007225 4.6e-09 65.1 67 44.8
Phvul.002G071800 Phaseolus vulgaris HOM05D000732 ORTHO05D007225 4.6e-09 65.1 46 63.0
Ciclev10031068m.g Citrus clementina HOM05D000732 ORTHO05D007225 6.1e-09 64.7 48 58.3
Lj2g0021682 Lotus japonicus HOM05D000732 ORTHO05D007225 6.1e-09 64.7 46 58.7
TAR629G1031 Trochodendron aralioides HOM05D000732 ORTHO05D007225 6.1e-09 64.7 70 45.7
arahy.Tifrunner.gnm1.ann1.V0668Y Arachis hypogaea HOM05D000732 ORTHO05D007225 7.9e-09 64.3 46 58.7
FAN22G0662 Fragaria x ananassa HOM05D000732 ORTHO05D007225 7.9e-09 64.3 73 46.6
Peaxi162Scf00338g00223 Petunia axillaris HOM05D000732 ORTHO05D007225 7.9e-09 64.3 67 46.3
Sabra10G0027600 Salix brachista HOM05D000732 ORTHO05D007225 1.0e-08 63.9 71 47.9
FvH4_4g34410 Fragaria vesca HOM05D000732 ORTHO05D007225 1.3e-08 63.5 73 45.2
FAN12G2269 Fragaria x ananassa HOM05D000732 ORTHO05D007225 1.3e-08 63.5 73 45.2
Psat2g106200 Pisum sativum HOM05D000732 ORTHO05D007225 1.3e-08 63.5 45 57.8
Thecc.02G248500 Theobroma cacao HOM05D000732 ORTHO05D007225 1.3e-08 63.5 56 51.8
arahy.Tifrunner.gnm1.ann1.S6CLIJ Arachis hypogaea HOM05D000732 ORTHO05D007225 1.8e-08 63.2 46 56.5
Potri.008G192300 Populus trichocarpa HOM05D000732 ORTHO05D007225 1.8e-08 63.2 46 58.7
SalBow2G2423 Salvia bowleyana HOM05D000732 ORTHO05D007225 1.8e-08 63.2 110 36.4
TAR371G0352 Trochodendron aralioides HOM05D000732 ORTHO05D007225 1.8e-08 63.2 72 47.2
Aa31LG7G7670 Aethionema arabicum HOM05D000732 ORTHO05D007225 2.3e-08 62.8 92 34.8
Lsat_1_v5_gn_8_157120 Lactuca sativa HOM05D000732 ORTHO05D007225 3.0e-08 62.4 88 42.0
FAN07G1798 Fragaria x ananassa HOM05D000732 ORTHO05D007225 3.9e-08 62.0 73 45.2
EL10Ac6g13672 Beta vulgaris HOM05D000732 ORTHO05D007225 5.1e-08 61.6 101 36.6
Lsat_1_v5_gn_1_5940 Lactuca sativa HOM05D005655 ORTHO05D007386 5.1e-08 61.6 72 45.8
Prupe.1G254000 Prunus persica HOM05D000732 ORTHO05D007225 5.1e-08 61.6 73 45.2
Lalb_Chr05g0216901 Lupinus albus HOM05D000732 ORTHO05D007225 6.7e-08 61.2 67 41.8
Hund25346 Selenicereus undatus HOM05D000732 ORTHO05D007225 6.7e-08 61.2 47 51.1
FAN17G2219 Fragaria x ananassa HOM05D000732 ORTHO05D007225 8.7e-08 60.8 73 43.8
Sed0004489 Sechium edule HOM05D000732 ORTHO05D007225 8.7e-08 60.8 54 50.0
BcaC05g26291 Brassica carinata HOM05D000732 ORTHO05D007225 1.1e-07 60.5 58 43.1
BolC5t30996H Brassica oleracea HOM05D000732 ORTHO05D007225 1.1e-07 60.5 58 43.1
MD16G1092400 Malus domestica HOM05D000732 ORTHO05D007225 1.1e-07 60.5 63 49.2
Nitab4.5_0004308g0060 Nicotiana tabacum HOM05D000732 ORTHO05D007225 1.5e-07 60.1 38 65.8
Potri.010G038600 Populus trichocarpa HOM05D000732 ORTHO05D007225 1.5e-07 60.1 73 46.6
AUR62005377 Chenopodium quinoa HOM05D000732 ORTHO05D007225 1.9e-07 59.7 46 56.5
Hma1.2p1_0867F.1_g230180 Hydrangea macrophylla HOM05D000732 ORTHO05D007225 1.9e-07 59.7 84 45.2
Ah.02g129920 Amaranthus hybridus HOM05D000732 ORTHO05D007225 3.3e-07 58.9 64 46.9
A08p28020 Brassica napus HOM05D000732 ORTHO05D007225 4.3e-07 58.5 56 46.4
BraA08t34732Z Brassica rapa HOM05D000732 ORTHO05D007225 4.3e-07 58.5 56 46.4
Eucgr.B03344 Eucalyptus grandis HOM05D000732 ORTHO05D007225 4.3e-07 58.5 56 48.2
MD13G1091800 Malus domestica HOM05D000732 ORTHO05D007225 4.3e-07 58.5 63 49.2
Sabra08G0145800 Salix brachista HOM05D000732 ORTHO05D007225 4.3e-07 58.5 47 57.4
ATR0730G107 Amborella trichopoda HOM05D000732 ORTHO05D007225 7.4e-07 57.8 94 33.0
MELO3C010661.2 Cucumis melo HOM05D000732 ORTHO05D007225 9.7e-07 57.4 46 52.2
A09p41030 Brassica napus HOM05D000732 ORTHO05D007225 1.3e-06 57.0 56 42.9
BraA09t39596Z Brassica rapa HOM05D000732 ORTHO05D007225 1.6e-06 56.6 56 41.1
Thhalv10007309m.g Eutrema salsugineum HOM05D000732 ORTHO05D007225 2.2e-06 56.2 56 46.4
Cpa.g.sc69.30 Carica papaya HOM05D000732 ORTHO05D007225 2.8e-06 55.8 56 46.4
AUR62014040 Chenopodium quinoa HOM05D000732 ORTHO05D007225 2.8e-06 55.8 94 35.1
THA.LOC104808945 Tarenaya hassleriana HOM05D000732 ORTHO05D007225 2.8e-06 55.8 96 37.5
Carub.0002s1703 Capsella rubella HOM05D000732 ORTHO05D007225 3.7e-06 55.5 46 47.8
Nn4g22799 Nelumbo nucifera HOM05D000732 ORTHO05D007225 3.7e-06 55.5 73 38.4
SGA_v2.0_scaffold165G38244 Striga asiatica HOM05D000732 ORTHO05D007225 3.7e-06 55.5 65 44.6
AL2G29650 Arabidopsis lyrata HOM05D000732 ORTHO05D007225 4.8e-06 55.1 46 47.8
ClCG08G018070 Citrullus lanatus HOM05D000732 ORTHO05D007225 4.8e-06 55.1 46 50.0
CsaV3_2G024570 Cucumis sativus L. HOM05D000732 ORTHO05D007225 4.8e-06 55.1 46 50.0
Sc11g0001190 Simmondsia chinensis HOM05D000732 ORTHO05D007225 4.8e-06 55.1 67 43.3
CARHR063520 Cardamine hirsuta HOM05D000732 ORTHO05D007225 6.3e-06 54.7 56 41.1
MBI16_g26454_MAGBIO Magnolia biondii HOM05D000732 ORTHO05D007225 6.3e-06 54.7 55 49.1
Medtr5g034380 Medicago truncatula HOM05D000732 ORTHO05D013253 6.3e-06 54.7 37 56.8
AT1G23790 Arabidopsis thaliana HOM05D000732 ORTHO05D007225 8.2e-06 54.3 58 39.7
BcaC07g39214 Brassica carinata HOM05D000732 ORTHO05D007225 8.2e-06 54.3 56 42.9
C08p22100 Brassica napus HOM05D000732 ORTHO05D007225 8.2e-06 54.3 56 42.9
BolC8t49855H Brassica oleracea HOM05D000732 ORTHO05D007225 8.2e-06 54.3 56 42.9
CARHR024210 Cardamine hirsuta HOM05D000732 ORTHO05D007225 8.2e-06 54.3 64 39.1
Hma1.2p1_0421F.1_g149940 Hydrangea macrophylla HOM05D000732 ORTHO05D013253 8.2e-06 54.3 38 63.2
Sp5g25460 Schrenkiella parvula HOM05D000732 ORTHO05D007225 8.2e-06 54.3 46 47.8


User provided reference genes

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