Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017823 Daucus carota HOM05D004156 ORTHO05D005259 2.5e-198 695.3 359 100.0
DCAR_014878 Daucus carota HOM05D004156 ORTHO05D005259 3.8e-146 521.9 358 80.2
Lj7C630T1 Lonicera japonica HOM05D004156 ORTHO05D005259 4.1e-132 475.3 356 73.9
Nitab4.5_0005139g0050 Nicotiana tabacum HOM05D004156 ORTHO05D005259 7.0e-132 474.6 360 71.7
Nitab4.5_0010819g0030 Nicotiana tabacum HOM05D004156 ORTHO05D005259 3.5e-131 472.2 360 71.4
Dinv36535 Davidia involucrata HOM05D004156 ORTHO05D003047 7.7e-131 471.1 351 73.5
Solyc12g006550.2 Solanum lycopersicum HOM05D004156 ORTHO05D005259 5.0e-130 468.4 358 70.9
HanXRQChr06g0181321 Helianthus annuus HOM05D004156 ORTHO05D005259 8.5e-130 467.6 351 71.8
Sopen12g002500 Solanum pennellii HOM05D004156 ORTHO05D005259 1.4e-129 466.8 358 70.7
PGSC0003DMG400018964 Solanum tuberosum HOM05D004156 ORTHO05D005259 1.6e-128 463.4 358 70.4
Lsat_1_v5_gn_9_120581 Lactuca sativa HOM05D004156 ORTHO05D005259 6.1e-128 461.5 360 70.6
Cc06_g08630 Coffea canephora HOM05D004156 ORTHO05D005259 1.0e-127 460.7 354 71.5
Hma1.2p1_0018F.1_g012530 Hydrangea macrophylla HOM05D004156 ORTHO05D005259 1.4e-127 460.3 358 70.7
HanXRQChr07g0187411 Helianthus annuus HOM05D004156 ORTHO05D005259 3.3e-126 455.7 352 70.7
CAN.G594.20 Capsicum annuum HOM05D004156 ORTHO05D005259 2.8e-125 452.6 341 70.4
ECA247G0053 Erigeron canadensis HOM05D004156 ORTHO05D005259 1.8e-124 449.9 358 67.9
Gorai.001G041600 Gossypium raimondii HOM05D004156 ORTHO05D005259 9.1e-124 447.6 359 67.1
Nn8g39422 Nelumbo nucifera HOM05D004156 ORTHO05D005259 1.2e-123 447.2 343 70.8
Thecc.09G124800 Theobroma cacao HOM05D004156 ORTHO05D005259 1.6e-123 446.8 359 68.0
Duzib150G1332 Durio zibethinus HOM05D004156 ORTHO05D005259 2.6e-123 446.0 361 68.1
GSVIVG01027072001 Vitis vinifera HOM05D004156 ORTHO05D005259 5.9e-123 444.9 351 69.8
Gohir.D07G039500 Gossypium hirsutum HOM05D004156 ORTHO05D005259 1.0e-122 444.1 359 66.9
ClCG03G013780 Citrullus lanatus HOM05D004156 ORTHO05D005259 1.7e-122 443.4 361 67.3
Gohir.A07G035500 Gossypium hirsutum HOM05D004156 ORTHO05D005259 1.7e-122 443.4 359 66.3
CsaV3_1G042300 Cucumis sativus L. HOM05D004156 ORTHO05D005259 2.2e-122 443.0 360 66.9
Actinidia35394 Actinidia chinensis HOM05D004156 ORTHO05D005259 3.8e-122 442.2 322 72.4
Gorai.009G018400 Gossypium raimondii HOM05D004156 ORTHO05D005259 5.0e-122 441.8 360 66.7
Peaxi162Scf00274g00336 Petunia axillaris HOM05D004156 ORTHO05D005259 6.5e-122 441.4 339 70.2
Cfa002719 Carpinus fangiana HOM05D004156 ORTHO05D005259 3.2e-121 439.1 335 70.4
Gohir.A05G017100 Gossypium hirsutum HOM05D004156 ORTHO05D005259 3.2e-121 439.1 359 67.1
GSVIVG01027422001 Vitis vinifera HOM05D004156 ORTHO05D005259 4.2e-121 438.7 331 71.6
MSTRG.12622 Avicennia marina HOM05D004156 ORTHO05D005259 8.0e-120 434.5 356 67.1
Haze_24995 Corylus avellana HOM05D004156 ORTHO05D005259 1.4e-119 433.7 340 68.5
TAR625G0545 Trochodendron aralioides HOM05D004156 ORTHO05D005259 3.0e-119 432.6 346 67.6
CiPaw.07G232300 Carya illinoinensis HOM05D004156 ORTHO05D005259 5.2e-119 431.8 348 67.0
CSS0011304 Camellia sinensis var. sinensis HOM05D004156 ORTHO05D005259 6.7e-119 431.4 360 67.5
Rhsim03G0247600 Rhododendron simsii HOM05D004156 ORTHO05D005259 8.8e-119 431.0 397 62.5
unitig_21.g20656 Utricularia gibba HOM05D004156 ORTHO05D005259 1.2e-118 430.6 359 65.7
MELO3C015663.2 Cucumis melo HOM05D004156 ORTHO05D005259 1.1e-116 424.1 360 64.7
COL.COLO4_05789 Corchorus olitorius HOM05D004156 ORTHO05D005259 3.1e-116 422.5 354 65.5
PGR102G0554 Punica granatum HOM05D004156 ORTHO05D005259 5.3e-116 421.8 354 66.1
Sed0021765 Sechium edule HOM05D004156 ORTHO05D005259 7.0e-116 421.4 350 66.6
Eucgr.E02428 Eucalyptus grandis HOM05D004156 ORTHO05D005259 9.1e-116 421.0 342 66.7
Lj4g0019515 Lotus japonicus HOM05D004156 ORTHO05D005259 2.0e-115 419.9 338 66.9
Phvul.003G163900 Phaseolus vulgaris HOM05D004156 ORTHO05D005259 3.5e-115 419.1 352 65.3
Prupe.7G241100 Prunus persica HOM05D004156 ORTHO05D005259 5.9e-115 418.3 355 65.4
Glyma.13G167900 Glycine max HOM05D004156 ORTHO05D005259 1.3e-114 417.2 361 64.3
Manes.14G131500 Manihot esculenta HOM05D004156 ORTHO05D005259 1.7e-114 416.8 369 64.2
SGA_v2.0_scaffold35G14133 Striga asiatica HOM05D004156 ORTHO05D005259 5.0e-114 415.2 356 64.9
Ciclev10008881m.g Citrus clementina HOM05D004156 ORTHO05D005259 8.5e-114 414.5 339 67.3
Psat2g006920 Pisum sativum HOM05D004156 ORTHO05D005259 8.5e-114 414.5 358 64.2
Glyma.17G115500 Glycine max HOM05D004156 ORTHO05D005259 1.1e-113 414.1 353 64.0
VMungo1309G1108 Vigna mungo HOM05D004156 ORTHO05D005259 1.5e-113 413.7 358 64.2
MD15G1174800 Malus domestica HOM05D004156 ORTHO05D005259 1.9e-113 413.3 358 65.9
SGA_v2.0_scaffold224G42948 Striga asiatica HOM05D004156 ORTHO05D005259 4.2e-113 412.1 351 65.8
vmacro22115 Vaccinium macrocarpon HOM05D004156 ORTHO05D005259 4.2e-113 412.1 352 67.0
MD02G1034000 Malus domestica HOM05D004156 ORTHO05D005259 5.5e-113 411.8 351 66.7
Phvul.009G258100 Phaseolus vulgaris HOM05D004156 ORTHO05D005259 9.4e-113 411.0 353 64.0
TWI32G0547 Tripterygium wilfordii HOM05D004156 ORTHO05D005259 1.2e-112 410.6 366 63.1
Potri.005G231000 Populus trichocarpa HOM05D004156 ORTHO05D005259 1.6e-112 410.2 328 66.8
VMungo1215G1862 Vigna mungo HOM05D004156 ORTHO05D005259 1.6e-112 410.2 357 63.6
Cpa.g.sc1199.3 Carica papaya HOM05D004156 ORTHO05D005259 2.7e-112 409.5 333 65.5
FAN23G0721 Fragaria x ananassa HOM05D004156 ORTHO05D005259 2.7e-112 409.5 352 64.2
FAN19G1880 Fragaria x ananassa HOM05D004156 ORTHO05D005259 3.6e-112 409.1 352 64.2
FvH4_1g03500 Fragaria vesca HOM05D004156 ORTHO05D005259 6.1e-112 408.3 352 64.2
FAN28G2743 Fragaria x ananassa HOM05D004156 ORTHO05D005259 6.1e-112 408.3 350 64.3
CANSAT11G1878 Cannabis sativa HOM05D004156 ORTHO05D005259 1.0e-111 407.5 353 63.5
Aqoxy2G02204 Aquilegia oxysepala HOM05D004156 ORTHO05D005259 3.0e-111 406.0 318 67.9
FAN26G1774 Fragaria x ananassa HOM05D004156 ORTHO05D005259 3.0e-111 406.0 350 64.0
Aqoxy6G01405 Aquilegia oxysepala HOM05D004156 ORTHO05D005259 4.0e-111 405.6 314 69.1
Sabra05G0178400 Salix brachista HOM05D004156 ORTHO05D000382 4.0e-111 405.6 359 63.0
THA.LOC104805714 Tarenaya hassleriana HOM05D004156 ORTHO05D005259 4.0e-111 405.6 357 62.5
QL02p088083 Quercus lobata HOM05D004156 ORTHO05D005259 5.2e-111 405.2 356 62.9
arahy.Tifrunner.gnm1.ann1.KP5LKI Arachis hypogaea HOM05D004156 ORTHO05D005259 1.2e-110 404.1 357 62.7
Lalb_Chr12g0197861 Lupinus albus HOM05D004156 ORTHO05D005259 1.2e-110 404.1 355 61.4
ClCG06G011000 Citrullus lanatus HOM05D004156 ORTHO05D005259 1.5e-110 403.7 347 63.4
PSO210G0875 Papaver somniferum HOM05D004156 ORTHO05D005259 1.5e-110 403.7 352 63.6
MBI01_g37801_MAGBIO Magnolia biondii HOM05D004156 ORTHO05D005259 3.4e-110 402.5 314 69.1
THA.LOC104806527 Tarenaya hassleriana HOM05D004156 ORTHO05D005259 9.8e-110 401.0 361 62.0
PSO832G0272 Papaver somniferum HOM05D004156 ORTHO05D005259 3.7e-109 399.1 353 63.7
Migut.L01695 Erythranthe guttata HOM05D004156 ORTHO05D005259 4.8e-109 398.7 361 61.5
arahy.Tifrunner.gnm1.ann1.FDU8BE Arachis hypogaea HOM05D004156 ORTHO05D005259 1.1e-108 397.5 342 62.9
Oeu055874.1 Olea europaea HOM05D004156 ORTHO05D005259 1.1e-108 397.5 341 66.6
Sed0019954 Sechium edule HOM05D004156 ORTHO05D005259 1.1e-108 397.5 358 62.0
TPR.G25243 Trifolium pratense HOM05D004156 ORTHO05D005259 1.8e-108 396.7 361 61.5
SalBow5G0058 Salvia bowleyana HOM05D004156 ORTHO05D005259 2.4e-108 396.4 436 52.8
Aa31LG5G23180 Aethionema arabicum HOM05D004156 ORTHO05D005259 9.1e-108 394.4 342 61.7
Sc14g0000240 Simmondsia chinensis HOM05D004156 ORTHO05D005259 2.0e-107 393.3 314 66.9
Medtr2g008870 Medicago truncatula HOM05D004156 ORTHO05D005259 2.7e-107 392.9 350 61.1
Atru.chr7.278 Acer truncatum HOM05D004156 ORTHO05D005259 5.9e-107 391.7 359 61.6
TWI34G0257 Tripterygium wilfordii HOM05D004156 ORTHO05D005259 3.8e-106 389.0 398 57.0
RcHm_v2.0_Chr2g0088711 Rosa chinensis HOM05D004156 ORTHO05D005259 8.6e-106 387.9 348 61.8
EL10Ac8g18639 Beta vulgaris HOM05D004156 ORTHO05D005259 2.5e-105 386.3 356 61.0
ATR0730G095 Amborella trichopoda HOM05D004156 ORTHO05D005259 9.5e-105 384.4 341 62.8
Lalb_Chr07g0178901 Lupinus albus HOM05D004156 ORTHO05D005259 1.8e-103 380.2 326 64.1
Gohir.D05G018000 Gossypium hirsutum HOM05D004156 ORTHO05D005259 2.3e-103 379.8 284 70.1
HPP92_015694 Vanilla planifolia HOM05D004156 ORTHO05D005259 3.0e-103 379.4 345 61.7
AL4G34970 Arabidopsis lyrata HOM05D004156 ORTHO05D005259 4.0e-103 379.0 346 59.8
A03p21000 Brassica napus HOM05D004156 ORTHO05D005259 4.0e-103 379.0 349 59.3
BraA03t11339Z Brassica rapa HOM05D004156 ORTHO05D005259 4.0e-103 379.0 349 59.3
Zm00001eb122260 Zea mays HOM05D004156 ORTHO05D005259 8.9e-103 377.9 347 61.1
Sp4g20310 Schrenkiella parvula HOM05D004156 ORTHO05D005259 1.2e-102 377.5 345 59.4
Ah.14g087130 Amaranthus hybridus HOM05D004156 ORTHO05D005259 1.5e-102 377.1 315 63.8
Thhalv10016958m.g Eutrema salsugineum HOM05D004156 ORTHO05D005259 1.5e-102 377.1 346 59.8
A04p29140 Brassica napus HOM05D004156 ORTHO05D005259 7.5e-102 374.8 348 58.6
AUR62011120 Chenopodium quinoa HOM05D004156 ORTHO05D005259 3.7e-101 372.5 317 62.1
BcaC02g12926 Brassica carinata HOM05D004156 ORTHO05D005259 4.9e-101 372.1 347 58.2
BraA04t18383Z Brassica rapa HOM05D004156 ORTHO05D005259 6.3e-101 371.7 348 58.3
Carub.0004s1996 Capsella rubella HOM05D004156 ORTHO05D005259 6.3e-101 371.7 341 58.1
AT2G37990 Arabidopsis thaliana HOM05D004156 ORTHO05D005259 8.3e-101 371.3 346 59.0
BcaC01g05579 Brassica carinata HOM05D004156 ORTHO05D005259 1.4e-100 370.5 350 58.0
BolC3t14862H Brassica oleracea HOM05D004156 ORTHO05D005259 1.4e-100 370.5 350 58.0
C04p66350 Brassica napus HOM05D004156 ORTHO05D005259 2.4e-100 369.8 348 58.0
AUR62013371 Chenopodium quinoa HOM05D004156 ORTHO05D005259 5.4e-100 368.6 317 61.2
CiPaw.15G031800 Carya illinoinensis HOM05D004156 ORTHO05D005259 7.0e-100 368.2 329 61.1
BcaNung06518 Brassica carinata HOM05D004156 ORTHO05D005259 2.0e-99 366.7 349 57.6
Os04g0685100 Oryza sativa ssp. japonica HOM05D004156 ORTHO05D005259 2.0e-99 366.7 346 58.7
BcaB01g03735 Brassica carinata HOM05D004156 ORTHO05D005259 2.7e-99 366.3 340 59.1
BolC4t28140H Brassica oleracea HOM05D004156 ORTHO05D005259 1.0e-98 364.4 350 57.1
CARHR132550 Cardamine hirsuta HOM05D004156 ORTHO05D005259 2.3e-98 363.2 349 57.3
BcaNung06338 Brassica carinata HOM05D004156 ORTHO05D005259 2.5e-97 359.8 340 58.8
CDE04G1546 Ceratophyllum demersum HOM05D004156 ORTHO05D005259 4.3e-97 359.0 313 62.0
Actinidia26780 Actinidia chinensis HOM05D004156 ORTHO05D005259 4.7e-96 355.5 367 58.9
Gohir.D08G025232 Gossypium hirsutum HOM05D004156 ORTHO05D005259 4.7e-96 355.5 416 51.7
Hund09135 Selenicereus undatus HOM05D004156 ORTHO05D005259 1.8e-95 353.6 370 57.8
SEGI_31652 Sequoiadendron giganteum HOM05D004156 ORTHO05D005259 2.1e-88 330.1 361 51.2
Ca_00137_v3 Cicer arietinum L. HOM05D004156 ORTHO05D000741 6.2e-88 328.6 374 54.3
Zm00001eb337040 Zea mays HOM05D004156 ORTHO05D005259 3.4e-86 322.8 344 55.2
Mapoly0036s0028 Marchantia polymorpha HOM05D004156 ORTHO05D005259 9.2e-84 314.7 356 51.7
Atru.chr7.1220 Acer truncatum HOM05D004156 ORTHO05D005259 3.9e-82 309.3 343 53.4
A05p08010 Brassica napus HOM05D004156 ORTHO05D005259 1.9e-76 290.4 350 49.7
AagrBONN_evm.TU.Sc2ySwM_368.2845 Anthoceros agrestis HOM05D004156 ORTHO05D005259 3.2e-76 289.7 354 48.9
BraA05t19767Z Brassica rapa HOM05D004156 ORTHO05D005259 3.2e-76 289.7 346 49.7
C03p24730 Brassica napus HOM05D004156 ORTHO05D005259 9.2e-76 288.1 243 63.4
Sc18g0000640 Simmondsia chinensis HOM05D004156 ORTHO05D005259 1.0e-74 284.6 327 52.0
HanXRQChr06g0181331 Helianthus annuus HOM05D004156 ORTHO05D005259 8.6e-74 281.6 169 82.8
SMO351G0347 Selaginella moellendorffii HOM05D004156 ORTHO05D005259 1.1e-71 274.6 272 55.1
Oeu045226.1 Olea europaea HOM05D004156 ORTHO05D005259 1.4e-68 264.2 353 49.3
Pp3c3_32550 Physcomitrium patens HOM05D004156 ORTHO05D005259 3.0e-66 256.5 357 47.1
BcaB02g09228 Brassica carinata HOM05D004156 ORTHO05D005259 2.8e-64 250.0 227 61.7
BolC4t22574H Brassica oleracea HOM05D004156 ORTHO05D005259 3.6e-64 249.6 298 49.3
Nitab4.5_0002556g0050 Nicotiana tabacum HOM05D004156 ORTHO05D005259 3.6e-64 249.6 193 73.1
CBR_g18768 Chara braunii HOM05D004156 ORTHO05D005259 4.8e-64 249.2 351 46.4
C04p09670 Brassica napus HOM05D004156 ORTHO05D005259 6.0e-59 232.3 242 55.8
TAR626G0974 Trochodendron aralioides HOM05D004156 ORTHO05D005259 5.1e-58 229.2 204 61.8
BcaC02g11942 Brassica carinata HOM05D004156 ORTHO05D005259 8.7e-58 228.4 287 49.1
Gohir.A08G014600 Gossypium hirsutum HOM05D004156 ORTHO05D005259 2.4e-52 210.3 135 80.0
BcaC02g11940 Brassica carinata HOM05D004156 ORTHO05D005259 2.5e-49 200.3 182 61.5
C03p24670 Brassica napus HOM05D004156 ORTHO05D005259 3.7e-48 196.4 183 56.3
Os06g0142050 Oryza sativa ssp. japonica HOM05D004156 ORTHO05D005259 2.8e-40 170.2 161 64.0
TAR383G1033 Trochodendron aralioides HOM05D004156 ORTHO05D005259 1.5e-38 164.5 186 56.5
Cre01.g020950 Chlamydomonas reinhardtii HOM05D004156 ORTHO05D005259 1.0e-37 161.8 330 34.8
Actinidia37158 Actinidia chinensis HOM05D004156 ORTHO05D005259 7.1e-36 155.6 122 72.1
BcaC09g49789 Brassica carinata HOM05D004156 ORTHO05D005259 1.4e-31 141.4 143 60.1
PRCOL_00002162 Prasinoderma coloniale HOM05D004156 ORTHO05D005259 3.2e-28 130.2 387 33.3
MCO03G226 Micromonas commoda HOM05D004156 ORTHO05D005259 1.1e-23 115.2 324 31.2
BcaNung06017 Brassica carinata HOM05D004156 ORTHO05D005259 1.9e-20 104.4 81 61.7
C01p32910 Brassica napus HOM05D004156 ORTHO05D005259 3.2e-20 103.6 99 58.6
Nn8g39426 Nelumbo nucifera HOM05D004156 ORTHO05D005259 5.1e-18 96.3 76 64.5
AagrBONN_evm.TU.Sc2ySwM_228.5043 Anthoceros agrestis HOM05D004156 ORTHO05D005259 2.0e-17 94.4 104 50.0
AagrBONN_evm.TU.Sc2ySwM_228.5042 Anthoceros agrestis HOM05D004156 ORTHO05D005259 9.7e-17 92.0 90 54.4
Rhsim11G0147700 Rhododendron simsii HOM05D004156 ORTHO05D338749 9.1e-15 85.5 61 72.1
TAR636G0452 Trochodendron aralioides HOM05D000809 ORTHO05D007735 2.7e-11 73.9 43 79.1
TAR626G1412 Trochodendron aralioides HOM05D004156 ORTHO05D005259 5.7e-09 66.2 110 45.5
Zm00001eb060690 Zea mays HOM05D004156 ORTHO05D005259 3.7e-08 63.5 50 58.0
Psat0s2088g0120 Pisum sativum HOM05D001944 ORTHO05D002405 4.8e-08 63.2 38 84.2
Zm00001eb433790 Zea mays HOM05D003078 ORTHO05D446193 2.4e-07 60.8 60 48.3
Lsat_1_v5_gn_7_76440 Lactuca sativa HOM05D000009 ORTHO05D000008 9.1e-07 58.9 74 52.7
Glyma.20G228801 Glycine max HOM05D004156 ORTHO05D211242 5.9e-06 56.2 89 43.8


User provided reference genes

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