Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_017288 Daucus carota HOM05D000538 ORTHO05D000614 6.1e-52 207.2 105 100.0
DCAR_031282 Daucus carota HOM05D000538 ORTHO05D000614 8.0e-28 127.1 105 66.7
Nitab4.5_0008264g0010 Nicotiana tabacum HOM05D000538 ORTHO05D000614 2.0e-10 69.3 85 40.0
Actinidia26954 Actinidia chinensis HOM05D000538 ORTHO05D000614 2.6e-10 68.9 93 41.9
Nitab4.5_0000786g0080 Nicotiana tabacum HOM05D000538 ORTHO05D000614 2.6e-10 68.9 85 38.8
Peaxi162Scf00030g00224 Petunia axillaris HOM05D000538 ORTHO05D000614 5.7e-10 67.8 88 38.6
Lsat_1_v5_gn_7_18320 Lactuca sativa HOM05D000538 ORTHO05D000614 9.8e-10 67.0 83 39.8
QL01p044471 Quercus lobata HOM05D000538 ORTHO05D000614 1.7e-09 66.2 82 42.7
Actinidia05541 Actinidia chinensis HOM05D000538 ORTHO05D000614 2.2e-09 65.9 93 38.7
MSTRG.9015 Avicennia marina HOM05D000538 ORTHO05D000614 2.8e-09 65.5 85 40.0
CiPaw.09G080200 Carya illinoinensis HOM05D000538 ORTHO05D000614 3.7e-09 65.1 82 41.5
DCAR_024903 Daucus carota HOM05D000538 ORTHO05D000614 3.7e-09 65.1 86 43.0
QL09p048604 Quercus lobata HOM05D000538 ORTHO05D000614 3.7e-09 65.1 79 44.3
Oeu058171.1 Olea europaea HOM05D000538 ORTHO05D000614 4.9e-09 64.7 85 40.0
QL04p080862 Quercus lobata HOM05D000538 ORTHO05D000614 4.9e-09 64.7 79 44.3
Sed0002193 Sechium edule HOM05D000538 ORTHO05D000614 4.9e-09 64.7 91 36.3
vmacro12238 Vaccinium macrocarpon HOM05D000538 ORTHO05D000614 4.9e-09 64.7 101 34.7
Lj2C275T5 Lonicera japonica HOM05D000538 ORTHO05D000614 6.3e-09 64.3 82 41.5
HanXRQChr15g0482761 Helianthus annuus HOM05D000538 ORTHO05D000614 8.3e-09 63.9 87 35.6
Oeu058169.1 Olea europaea HOM05D000538 ORTHO05D000614 8.3e-09 63.9 82 41.5
HanXRQChr05g0130791 Helianthus annuus HOM05D000538 ORTHO05D000614 1.1e-08 63.5 85 36.5
PGSC0003DMG400030831 Solanum tuberosum HOM05D000538 ORTHO05D000614 1.1e-08 63.5 85 37.6
Oeu063070.2 Olea europaea HOM05D000538 ORTHO05D000614 1.8e-08 62.8 85 37.6
SGA_v2.0_scaffold62G21365 Striga asiatica HOM05D000538 ORTHO05D000614 2.4e-08 62.4 82 35.4
Thecc.07G148000 Theobroma cacao HOM05D000538 ORTHO05D000614 2.4e-08 62.4 85 40.0
MSTRG.14651 Avicennia marina HOM05D000538 ORTHO05D000614 3.1e-08 62.0 91 36.3
QL05p077181 Quercus lobata HOM05D000538 ORTHO05D000614 3.1e-08 62.0 100 38.0
QL93p0073_1288 Quercus lobata HOM05D000538 ORTHO05D000614 3.1e-08 62.0 100 38.0
Atru.chr1.3753 Acer truncatum HOM05D000538 ORTHO05D000614 4.1e-08 61.6 85 35.3
Migut.M01263 Erythranthe guttata HOM05D000538 ORTHO05D000614 4.1e-08 61.6 82 37.8
SGA_v2.0_scaffold52G19083 Striga asiatica HOM05D000538 ORTHO05D000614 5.4e-08 61.2 85 34.1
SGA_v2.0_scaffold52G19146 Striga asiatica HOM05D000538 ORTHO05D000614 5.4e-08 61.2 85 35.3
vmacro04270 Vaccinium macrocarpon HOM05D000538 ORTHO05D000614 5.4e-08 61.2 83 41.0
SGA_v2.0_scaffold52G19087 Striga asiatica HOM05D000538 ORTHO05D000614 7.0e-08 60.8 85 32.9
SGA_v2.0_scaffold52G19155 Striga asiatica HOM05D000538 ORTHO05D000614 7.0e-08 60.8 85 34.1
ClCG01G022290 Citrullus lanatus HOM05D000538 ORTHO05D000614 9.2e-08 60.5 85 40.0
Sopen04g029590 Solanum pennellii HOM05D000538 ORTHO05D000614 9.2e-08 60.5 114 35.1
SGA_v2.0_scaffold52G19023 Striga asiatica HOM05D000538 ORTHO05D000614 9.2e-08 60.5 85 34.1
SGA_v2.0_scaffold52G19080 Striga asiatica HOM05D000538 ORTHO05D000614 9.2e-08 60.5 85 34.1
COL.COLO4_13007 Corchorus olitorius HOM05D000538 ORTHO05D000614 1.2e-07 60.1 87 35.6
Lsat_1_v5_gn_1_125380 Lactuca sativa HOM05D000538 ORTHO05D000614 1.2e-07 60.1 82 35.4
ClCG02G001630 Citrullus lanatus HOM05D000538 ORTHO05D000614 1.6e-07 59.7 85 36.5
MELO3C018793.2 Cucumis melo HOM05D000538 ORTHO05D000614 1.6e-07 59.7 85 36.5
CsaV3_7G003860 Cucumis sativus L. HOM05D000538 ORTHO05D000614 1.6e-07 59.7 85 36.5
SalBow5G1539 Salvia bowleyana HOM05D000538 ORTHO05D000614 1.6e-07 59.7 85 37.6
DCAR_007866 Daucus carota HOM05D000538 ORTHO05D000614 2.0e-07 59.3 79 40.5
Duzib213G0266 Durio zibethinus HOM05D000538 ORTHO05D000614 2.0e-07 59.3 85 38.8
QL02p026523 Quercus lobata HOM05D000538 ORTHO05D000614 2.0e-07 59.3 79 44.3
MELO3C027126.2 Cucumis melo HOM05D000538 ORTHO05D000614 2.7e-07 58.9 85 38.8
CsaV3_6G049420 Cucumis sativus L. HOM05D000538 ORTHO05D000614 2.7e-07 58.9 85 38.8
Nn1g03728 Nelumbo nucifera HOM05D000538 ORTHO05D000614 2.7e-07 58.9 101 33.7
Lju1220C3T4 Lonicera japonica HOM05D000538 ORTHO05D000614 3.5e-07 58.5 82 40.2
Dinv10905 Davidia involucrata HOM05D000538 ORTHO05D000614 4.5e-07 58.2 94 37.2
ECA236G5057 Erigeron canadensis HOM05D000538 ORTHO05D000614 4.5e-07 58.2 85 34.1
SGA_v2.0_scaffold52G19112 Striga asiatica HOM05D000538 ORTHO05D000614 4.5e-07 58.2 85 31.8
SGA_v2.0_scaffold62G21349 Striga asiatica HOM05D000538 ORTHO05D000614 4.5e-07 58.2 85 32.9
Gohir.A13G018100 Gossypium hirsutum HOM05D000538 ORTHO05D000614 5.9e-07 57.8 85 35.3
Gorai.013G021200 Gossypium raimondii HOM05D000538 ORTHO05D000614 5.9e-07 57.8 82 36.6
Actinidia12491 Actinidia chinensis HOM05D000538 ORTHO05D000614 7.7e-07 57.4 82 35.4
CDE05G1513 Ceratophyllum demersum HOM05D000538 ORTHO05D000614 7.7e-07 57.4 94 34.0
Duzib213G0460 Durio zibethinus HOM05D000538 ORTHO05D000614 7.7e-07 57.4 84 39.3
ECA248G3523 Erigeron canadensis HOM05D000538 ORTHO05D000614 7.7e-07 57.4 82 37.8
RcHm_v2.0_Chr2g0160351 Rosa chinensis HOM05D000538 ORTHO05D000614 7.7e-07 57.4 87 35.6
SGA_v2.0_scaffold52G19085 Striga asiatica HOM05D000538 ORTHO05D000614 7.7e-07 57.4 85 32.9
SGA_v2.0_scaffold52G19092 Striga asiatica HOM05D000538 ORTHO05D000614 7.7e-07 57.4 85 32.9
SGA_v2.0_scaffold62G21345 Striga asiatica HOM05D000538 ORTHO05D000614 7.7e-07 57.4 85 32.9
Dinv18944 Davidia involucrata HOM05D000538 ORTHO05D000614 1.3e-06 56.6 93 34.4
TWI38G2228 Tripterygium wilfordii HOM05D000538 ORTHO05D000614 1.3e-06 56.6 85 30.6
FAN21G0633 Fragaria x ananassa HOM05D000538 ORTHO05D000614 1.7e-06 56.2 82 35.4
FAN21G1131 Fragaria x ananassa HOM05D000538 ORTHO05D000614 1.7e-06 56.2 82 35.4
FAN25G1625 Fragaria x ananassa HOM05D000538 ORTHO05D000614 1.7e-06 56.2 82 35.4
Sabra11G0087800 Salix brachista HOM05D000538 ORTHO05D000614 1.7e-06 56.2 87 40.2
Lalb_Chr05g0228411 Lupinus albus HOM05D000538 ORTHO05D000614 2.3e-06 55.8 82 35.4
MD05G1335900 Malus domestica HOM05D000538 ORTHO05D000614 2.3e-06 55.8 82 36.6
MSTRG.13164 Avicennia marina HOM05D000538 ORTHO05D000614 2.9e-06 55.5 85 34.1
COL.COLO4_17402 Corchorus olitorius HOM05D000538 ORTHO05D000614 2.9e-06 55.5 82 36.6
Gohir.A10G196200 Gossypium hirsutum HOM05D000538 ORTHO05D000614 2.9e-06 55.5 103 32.0
Gohir.D10G203100 Gossypium hirsutum HOM05D000538 ORTHO05D000614 2.9e-06 55.5 103 32.0
Gohir.D13G019101 Gossypium hirsutum HOM05D000538 ORTHO05D000614 2.9e-06 55.5 82 35.4
Gorai.011G228000 Gossypium raimondii HOM05D000538 ORTHO05D000614 2.9e-06 55.5 103 32.0
Prupe.3G046700 Prunus persica HOM05D002395 ORTHO05D000614 2.9e-06 55.5 82 37.8
RcHm_v2.0_Chr5g0004541 Rosa chinensis HOM05D000538 ORTHO05D000614 2.9e-06 55.5 82 37.8
Sabra11G0087400 Salix brachista HOM05D000538 ORTHO05D000614 2.9e-06 55.5 87 39.1
SGA_v2.0_scaffold469G52068 Striga asiatica HOM05D000538 ORTHO05D000614 2.9e-06 55.5 85 29.4
SGA_v2.0_scaffold52G19076 Striga asiatica HOM05D000538 ORTHO05D000614 2.9e-06 55.5 72 37.5
TWI38G1831 Tripterygium wilfordii HOM05D000538 ORTHO05D000614 2.9e-06 55.5 85 29.4
Cpa.g.sc8.251 Carica papaya HOM05D000538 ORTHO05D000614 3.8e-06 55.1 85 35.3
DCAR_015700 Daucus carota HOM05D000538 ORTHO05D000614 3.8e-06 55.1 83 37.3
Manes.07G017600 Manihot esculenta HOM05D000538 ORTHO05D000614 3.8e-06 55.1 85 32.9
Nn4g26474 Nelumbo nucifera HOM05D000538 ORTHO05D000614 3.8e-06 55.1 97 36.1
BolC4t26529H Brassica oleracea HOM05D000538 ORTHO05D000614 5.0e-06 54.7 82 36.6
CANSAT64G0769 Cannabis sativa HOM05D000538 ORTHO05D000614 5.0e-06 54.7 82 35.4
Ciclev10015528m.g Citrus clementina HOM05D000538 ORTHO05D000614 5.0e-06 54.7 85 32.9
HanXRQChr03g0087661 Helianthus annuus HOM05D000538 ORTHO05D000614 5.0e-06 54.7 82 34.1
Lj8P121T27 Lonicera japonica HOM05D000538 ORTHO05D000614 5.0e-06 54.7 105 33.3
Manes.16G016900 Manihot esculenta HOM05D000538 ORTHO05D000614 5.0e-06 54.7 85 32.9
Sp1g10140 Schrenkiella parvula HOM05D000538 ORTHO05D000614 5.0e-06 54.7 82 35.4
BcaC02g08887 Brassica carinata HOM05D000538 ORTHO05D000614 6.6e-06 54.3 82 36.6
Dinv15618 Davidia involucrata HOM05D000538 ORTHO05D000614 6.6e-06 54.3 83 34.9
Gohir.A01G040800 Gossypium hirsutum HOM05D000538 ORTHO05D000614 6.6e-06 54.3 85 35.3
Lsat_1_v5_gn_3_43101 Lactuca sativa HOM05D000538 ORTHO05D000614 6.6e-06 54.3 83 39.8
Oeu061996.1 Olea europaea HOM05D016698 ORTHO05D019323 6.6e-06 54.3 82 34.1
Sabra16G0183500 Salix brachista HOM05D000538 ORTHO05D000614 6.6e-06 54.3 81 39.5
TAR627G0243 Trochodendron aralioides HOM05D000538 ORTHO05D000614 6.6e-06 54.3 84 36.9
FvH4_3g02930 Fragaria vesca HOM05D000538 ORTHO05D000614 8.6e-06 53.9 82 34.1
Gohir.D01G028300 Gossypium hirsutum HOM05D000538 ORTHO05D000614 8.6e-06 53.9 85 35.3
Gorai.002G037800 Gossypium raimondii HOM05D000538 ORTHO05D000614 8.6e-06 53.9 85 35.3


User provided reference genes

Program Settings