Gene: COL.COLO4_17402
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_17402
- Transcript Identifier COL.rna16166
- Gene Type Coding gene
- Location AWUE01016338.1 : 24514-25695 : negative
Gene Family Information
- ID HOM05D000538
- #Genes/#Species 1016/97
- Phylogenetic origin
- ID ORTHO05D000614
- #Genes/#Species 740/90
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna16166
- GenBank OMO92674.1
- id gene17374
- gene_name COLO4_17402
- uniprot A0A1R3JCY3
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0010629 | ISO | PLAZA Integrative Orthology | negative regulation of gene expression | AT4G00250 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT1G44810 |
| GO:0071333 | ISO | PLAZA Integrative Orthology | cellular response to glucose stimulus | AT4G00250 |
| GO:0019760 | ISO | PLAZA Integrative Orthology | glucosinolate metabolic process | AT1G61730 |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT1G44810 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G61730 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT1G61730 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016592 | ISO | PLAZA Integrative Orthology | mediator complex | AT4G25210 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G61730 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT1G61730 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007592 | GLABROUS1 enhancer-binding protein family |
| Mapman id | Description |
|---|---|
| 15.5.28 | RNA biosynthesis.transcriptional regulation.transcription factor (GeBP) |