Gene: vmacro12238
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro12238
- Transcript Identifier vmacro12238-RA
- Gene Type Coding gene
- Location chr11_Vaccinium_macrocarpon_Stevens_v1 : 11296983-11306903 : positive
Gene Family Information
- ID HOM05D000538
- #Genes/#Species 1016/97
- Phylogenetic origin
- ID ORTHO05D000614
- #Genes/#Species 740/90
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id vmacro12238_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to STK: STOREKEEPER protein (Solanum tuberosum OX=4113)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT1G44810 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT5G28040 |
| GO:0010629 | ISO | PLAZA Integrative Orthology | negative regulation of gene expression | AT4G00238 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT1G44810 |
| GO:0071333 | ISO | PLAZA Integrative Orthology | cellular response to glucose stimulus | AT4G00238 |
| GO:0019760 | ISO | PLAZA Integrative Orthology | glucosinolate metabolic process | AT1G61730 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G28040 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G28040 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT1G61730 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G28040 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT5G28040 |
| GO:0016592 | ISO | PLAZA Integrative Orthology | mediator complex | AT4G25210 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G61730 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007592 | GLABROUS1 enhancer-binding protein family |
| Mapman id | Description |
|---|---|
| 15.5.28 | RNA biosynthesis.transcriptional regulation.transcription factor (GeBP) |