Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_016528 Daucus carota HOM05D006697 ORTHO05D008161 2.7e-109 398.7 199 100.0
Dinv22109 Davidia involucrata HOM05D006697 ORTHO05D008161 6.0e-77 291.2 200 71.5
Hma1.2p1_0417F.1_g148910 Hydrangea macrophylla HOM05D006697 ORTHO05D008161 1.1e-75 287.0 182 72.5
Lj5C630T5 Lonicera japonica HOM05D006697 ORTHO05D008161 1.1e-75 287.0 178 75.3
Aqoxy7G01951 Aquilegia oxysepala HOM05D006697 ORTHO05D008161 4.8e-74 281.6 200 67.0
Atru.chr13.2506 Acer truncatum HOM05D006697 ORTHO05D008161 6.3e-74 281.2 197 68.0
TWI12G1402 Tripterygium wilfordii HOM05D006697 ORTHO05D008161 6.3e-74 281.2 184 70.7
Atru.chr13.2494 Acer truncatum HOM05D006697 ORTHO05D008161 1.8e-73 279.6 197 67.5
GSVIVG01036291001 Vitis vinifera HOM05D006697 ORTHO05D008161 2.4e-73 279.3 172 75.0
AUR62038532 Chenopodium quinoa HOM05D006697 ORTHO05D008161 5.3e-73 278.1 196 65.8
Potri.001G377100 Populus trichocarpa HOM05D006697 ORTHO05D008161 6.9e-73 277.7 190 70.0
QL09p001838 Quercus lobata HOM05D006697 ORTHO05D008161 6.9e-73 277.7 184 71.2
HanXRQChr08g0227531 Helianthus annuus HOM05D006697 ORTHO05D008161 9.0e-73 277.3 179 70.9
Sabra16G0248400 Salix brachista HOM05D006697 ORTHO05D008161 1.2e-72 276.9 184 70.1
Lj7A235T22 Lonicera japonica HOM05D006697 ORTHO05D008161 1.5e-72 276.6 172 75.6
Actinidia03526 Actinidia chinensis HOM05D006697 ORTHO05D008161 5.9e-72 274.6 196 68.4
Migut.C01379 Erythranthe guttata HOM05D006697 ORTHO05D008161 5.9e-72 274.6 197 66.0
QL11p001773 Quercus lobata HOM05D006697 ORTHO05D008161 5.9e-72 274.6 184 70.1
SGA_v2.0_scaffold24G10647 Striga asiatica HOM05D006697 ORTHO05D008161 2.9e-71 272.3 193 67.4
MBI04_g46123_MAGBIO Magnolia biondii HOM05D006697 ORTHO05D008161 5.0e-71 271.6 181 71.8
Haze_13956 Corylus avellana HOM05D006697 ORTHO05D008161 8.5e-71 270.8 190 68.4
Duzib213G0772 Durio zibethinus HOM05D006697 ORTHO05D008161 8.5e-71 270.8 180 70.6
CiPaw.04G009300 Carya illinoinensis HOM05D006697 ORTHO05D008161 1.1e-70 270.4 184 69.6
COL.COLO4_05203 Corchorus olitorius HOM05D006697 ORTHO05D008161 1.4e-70 270.0 186 69.9
Gohir.D05G329400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 2.5e-70 269.2 179 69.8
Gorai.009G352800 Gossypium raimondii HOM05D006697 ORTHO05D008161 2.5e-70 269.2 179 69.8
Thecc.08G178500 Theobroma cacao HOM05D006697 ORTHO05D008161 3.2e-70 268.9 179 70.9
CANSAT21G1464 Cannabis sativa HOM05D006697 ORTHO05D008161 4.2e-70 268.5 185 65.9
AUR62013379 Chenopodium quinoa HOM05D006697 ORTHO05D008161 5.5e-70 268.1 182 67.0
CANSAT21G1945 Cannabis sativa HOM05D006697 ORTHO05D008161 2.1e-69 266.2 180 66.7
Ciclev10024137m.g Citrus clementina HOM05D006697 ORTHO05D008161 2.7e-69 265.8 172 69.8
Sc23g0000070 Simmondsia chinensis HOM05D006697 ORTHO05D008161 3.6e-69 265.4 177 67.8
PGSC0003DMG400033140 Solanum tuberosum HOM05D006697 ORTHO05D008161 3.6e-69 265.4 194 66.5
EL10Ac1g01267 Beta vulgaris HOM05D006697 ORTHO05D008161 1.3e-68 263.5 178 66.3
Sopen06g023040 Solanum pennellii HOM05D006697 ORTHO05D008161 2.3e-68 262.7 194 66.0
Ah.05g170350 Amaranthus hybridus HOM05D006697 ORTHO05D008161 3.0e-68 262.3 178 65.7
Ca_26167_v3 Cicer arietinum L. HOM05D006697 ORTHO05D008161 5.1e-68 261.5 188 65.4
CsaV3_2G033200 Cucumis sativus L. HOM05D006697 ORTHO05D008161 6.7e-68 261.2 175 68.0
Glyma.12G014500 Glycine max HOM05D006697 ORTHO05D008161 8.7e-68 260.8 190 65.8
Sed0014406 Sechium edule HOM05D006697 ORTHO05D008161 1.9e-67 259.6 175 66.9
PSO170G3180 Papaver somniferum HOM05D006697 ORTHO05D008161 4.3e-67 258.5 184 66.8
Peaxi162Scf00818g00536 Petunia axillaris HOM05D006697 ORTHO05D008161 7.4e-67 257.7 179 66.5
PGR044G1078 Punica granatum HOM05D006697 ORTHO05D008161 9.7e-67 257.3 182 65.9
Solyc06g064560.4 Solanum lycopersicum HOM05D006697 ORTHO05D008161 9.7e-67 257.3 194 66.0
MD05G1003900 Malus domestica HOM05D006697 ORTHO05D008161 1.6e-66 256.5 186 64.0
TPR.G29429 Trifolium pratense HOM05D006697 ORTHO05D008161 2.2e-66 256.1 188 63.8
Cc10_g08640 Coffea canephora HOM05D006697 ORTHO05D008161 1.1e-65 253.8 172 70.3
Lj3g0000289 Lotus japonicus HOM05D006697 ORTHO05D008161 1.4e-65 253.4 196 62.2
Medtr2g010410 Medicago truncatula HOM05D006697 ORTHO05D008161 1.4e-65 253.4 197 60.4
Psat1g020920 Pisum sativum HOM05D006697 ORTHO05D008161 1.8e-65 253.1 192 61.5
ClCG11G008450 Citrullus lanatus HOM05D006697 ORTHO05D008161 3.1e-65 252.3 181 64.6
Cpa.g.sc21.84 Carica papaya HOM05D006697 ORTHO05D008161 6.9e-65 251.1 185 61.1
Glyma.11G110500 Glycine max HOM05D006697 ORTHO05D008161 9.1e-65 250.8 176 65.3
arahy.Tifrunner.gnm1.ann1.6HI5DG Arachis hypogaea HOM05D006697 ORTHO05D008161 1.2e-64 250.4 184 64.1
arahy.Tifrunner.gnm1.ann1.L3LJ1W Arachis hypogaea HOM05D006697 ORTHO05D008161 1.5e-64 250.0 184 64.1
arahy.Tifrunner.gnm1.ann1.D2QDKL Arachis hypogaea HOM05D006697 ORTHO05D008161 2.0e-64 249.6 195 61.5
CAN.G14.56 Capsicum annuum HOM05D006697 ORTHO05D008161 3.4e-64 248.8 170 69.4
VMungo1127G1290 Vigna mungo HOM05D006697 ORTHO05D008161 4.5e-64 248.4 188 62.2
Nn8g39331 Nelumbo nucifera HOM05D006697 ORTHO05D008161 1.0e-63 247.3 164 70.7
Phvul.011G017400 Phaseolus vulgaris HOM05D006697 ORTHO05D008161 1.7e-63 246.5 188 61.2
Sp1g11350 Schrenkiella parvula HOM05D006697 ORTHO05D008161 8.5e-63 244.2 186 59.7
Aa31LG2G660 Aethionema arabicum HOM05D006697 ORTHO05D008161 1.4e-62 243.4 191 59.7
Thhalv10008579m.g Eutrema salsugineum HOM05D006697 ORTHO05D008161 1.4e-62 243.4 177 61.6
Hund16916 Selenicereus undatus HOM05D006697 ORTHO05D008161 1.4e-62 243.4 181 63.0
ECA247G0072 Erigeron canadensis HOM05D006697 ORTHO05D008161 2.5e-62 242.7 172 66.3
THA.LOC104814608 Tarenaya hassleriana HOM05D006697 ORTHO05D008161 5.5e-62 241.5 176 61.9
Carub.0001s1251 Capsella rubella HOM05D006697 ORTHO05D008161 7.2e-62 241.1 191 59.2
PGR044G1872 Punica granatum HOM05D006697 ORTHO05D008161 9.4e-62 240.7 176 63.1
CARHR013100 Cardamine hirsuta HOM05D006697 ORTHO05D008161 2.1e-61 239.6 177 61.6
FvH4_2g00851 Fragaria vesca HOM05D006697 ORTHO05D008161 4.6e-61 238.4 177 62.1
vmacro17835 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 1.0e-60 237.3 189 61.4
AT1G12790 Arabidopsis thaliana HOM05D006697 ORTHO05D008161 1.4e-60 236.9 200 56.5
Manes.02G201500 Manihot esculenta HOM05D006697 ORTHO05D008161 1.4e-60 236.9 174 66.1
AL1G24400 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 2.3e-60 236.1 191 57.6
FAN20G2680 Fragaria x ananassa HOM05D006697 ORTHO05D008161 3.0e-60 235.7 179 61.5
SalBow7G2072 Salvia bowleyana HOM05D006697 ORTHO05D008161 3.9e-60 235.3 240 51.2
FAN27G1710 Fragaria x ananassa HOM05D006697 ORTHO05D008161 5.1e-60 235.0 179 60.3
MD05G1004600 Malus domestica HOM05D006697 ORTHO05D008161 2.0e-59 233.0 186 60.8
RcHm_v2.0_Chr6g0251241 Rosa chinensis HOM05D006697 ORTHO05D008161 2.6e-59 232.6 179 59.8
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 3.3e-59 232.3 141 76.6
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 5.7e-59 231.5 141 75.9
TAR625G0361 Trochodendron aralioides HOM05D006697 ORTHO05D008161 9.7e-59 230.7 178 61.2
BcaC05g25114 Brassica carinata HOM05D006697 ORTHO05D008161 1.3e-58 230.3 202 55.4
BcaC05g25157 Brassica carinata HOM05D000776 ORTHO05D008161 1.3e-58 230.3 202 55.4
C05p10520 Brassica napus HOM05D000776 ORTHO05D008161 1.3e-58 230.3 202 55.4
HPP92_021529 Vanilla planifolia HOM05D006697 ORTHO05D008161 1.3e-58 230.3 188 60.1
HPP92_021490 Vanilla planifolia HOM05D006697 ORTHO05D008161 2.8e-58 229.2 188 60.1
Gohir.A05G328400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 4.8e-58 228.4 150 70.0
vmacro14431 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 4.8e-58 228.4 217 54.4
Nitab4.5_0002654g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 4.1e-57 225.3 201 58.2
BolC5t29798H Brassica oleracea HOM05D000776 ORTHO05D008161 5.3e-57 224.9 206 54.4
Lsat_1_v5_gn_1_24901 Lactuca sativa HOM05D006697 ORTHO05D008161 6.9e-57 224.6 158 68.4
A06p08910 Brassica napus HOM05D000776 ORTHO05D008161 9.1e-57 224.2 187 56.1
BraA06t24084Z Brassica rapa HOM05D000776 ORTHO05D008161 1.2e-56 223.8 187 56.1
Os05g0588200 Oryza sativa ssp. japonica HOM05D006697 ORTHO05D008161 5.9e-56 221.5 200 57.0
Lj7C240T16 Lonicera japonica HOM05D006697 ORTHO05D008161 1.7e-55 219.9 173 65.3
SGA_v2.0_scaffold147G36299 Striga asiatica HOM05D006697 ORTHO05D008161 1.2e-53 213.8 179 60.3
Nitab4.5_0010319g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 2.7e-53 212.6 205 55.6
Zm00001eb345090 Zea mays HOM05D006697 ORTHO05D008161 3.6e-53 212.2 179 55.9
SHI16724 Sapria himalayana HOM05D006697 ORTHO05D008161 3.0e-52 209.1 185 58.4
Lalb_Chr01g0000751 Lupinus albus HOM05D006697 ORTHO05D008161 7.4e-51 204.5 145 65.5
Prupe.8G007100 Prunus persica HOM05D006697 ORTHO05D008161 2.0e-48 196.4 186 52.2
Rhsim08G0116200 Rhododendron simsii HOM05D006697 ORTHO05D008161 6.5e-47 191.4 184 55.4
CAN.G27.3 Capsicum annuum HOM05D006697 ORTHO05D008161 8.5e-47 191.0 147 61.2
ATR0083G058 Amborella trichopoda HOM05D006697 ORTHO05D008161 2.3e-44 183.0 136 62.5
arahy.Tifrunner.gnm1.ann1.GZG3VH Arachis hypogaea HOM05D006697 ORTHO05D008161 2.7e-37 159.5 150 54.0
AL1G24230 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 2.2e-34 149.8 132 56.1
Eucgr.F04072 Eucalyptus grandis HOM05D006697 ORTHO05D008161 8.3e-34 147.9 108 65.7
arahy.Tifrunner.gnm1.ann1.9U8FPX Arachis hypogaea HOM05D006697 ORTHO05D008161 5.4e-33 145.2 158 48.1
arahy.Tifrunner.gnm1.ann1.3DZ399 Arachis hypogaea HOM05D006697 ORTHO05D008161 5.9e-32 141.7 195 44.1
unitig_32.g11220 Utricularia gibba HOM05D000486 ORTHO05D000375 1.3e-31 140.6 137 51.8
MELO3C029791.2 Cucumis melo HOM05D006697 ORTHO05D008161 2.3e-28 129.8 118 55.9
MSTRG.1598 Avicennia marina HOM05D006697 ORTHO05D008161 6.3e-26 121.7 72 76.4
unitig_32.g11211 Utricularia gibba HOM05D006697 ORTHO05D008161 7.0e-25 118.2 85 63.5
SMO119G0513 Selaginella moellendorffii HOM05D006697 ORTHO05D008161 9.2e-25 117.9 175 33.7
RcHm_v2.0_Chr6g0275321 Rosa chinensis HOM05D006697 ORTHO05D008161 6.1e-21 105.1 77 59.7
arahy.Tifrunner.gnm1.ann1.K2UT7U Arachis hypogaea HOM05D006697 ORTHO05D008161 1.4e-20 104.0 74 60.8
Mapoly0068s0032 Marchantia polymorpha HOM05D006697 ORTHO05D008161 3.7e-18 95.9 176 29.5
arahy.Tifrunner.gnm1.ann1.D8HQTE Arachis hypogaea HOM05D006697 ORTHO05D008161 3.5e-16 89.4 73 60.3
Lj7A241T18 Lonicera japonica HOM05D006697 ORTHO05D008161 1.5e-11 73.9 43 76.7
Medtr2g451120 Medicago truncatula HOM05D006697 ORTHO05D008161 2.2e-10 70.1 90 42.2


User provided reference genes

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