Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015064 Daucus carota HOM05D001715 ORTHO05D004824 8.9e-148 526.9 271 100.0
Cc07_g00030 Coffea canephora HOM05D001715 ORTHO05D004824 5.3e-124 448.0 268 82.1
Dinv33423 Davidia involucrata HOM05D001715 ORTHO05D004824 8.4e-122 440.7 268 79.5
Lsat_1_v5_gn_4_184360 Lactuca sativa HOM05D001715 ORTHO05D004824 1.1e-121 440.3 268 79.5
HanXRQChr09g0255491 Helianthus annuus HOM05D001715 ORTHO05D004824 9.3e-121 437.2 269 78.4
CSS0010910 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 1.3e-119 433.3 269 79.6
Lju41A43T27 Lonicera japonica HOM05D001715 ORTHO05D004824 1.8e-116 422.9 281 75.8
Potri.001G342700 Populus trichocarpa HOM05D001715 ORTHO05D004824 5.3e-116 421.4 268 78.0
Hma1.2p1_1747F.1_g300590 Hydrangea macrophylla HOM05D001715 ORTHO05D004824 9.0e-116 420.6 269 76.2
FAN19G0324 Fragaria x ananassa HOM05D001715 ORTHO05D004824 3.4e-115 418.7 266 77.8
Actinidia36126 Actinidia chinensis HOM05D001715 ORTHO05D004824 2.2e-114 416.0 269 76.6
Medtr7g033200 Medicago truncatula HOM05D001715 ORTHO05D004824 2.9e-114 415.6 271 76.0
TPR.G1113 Trifolium pratense HOM05D001715 ORTHO05D004824 3.8e-114 415.2 271 75.6
FvH4_1g25240 Fragaria vesca HOM05D001715 ORTHO05D004824 1.9e-113 412.9 269 76.6
FAN28G2154 Fragaria x ananassa HOM05D001715 ORTHO05D004824 5.5e-113 411.4 269 75.8
Aa31LG2G5160 Aethionema arabicum HOM05D001715 ORTHO05D004824 7.1e-113 411.0 270 76.3
CARHR261430 Cardamine hirsuta HOM05D001715 ORTHO05D004824 9.3e-113 410.6 273 75.5
MD17G1021800 Malus domestica HOM05D001715 ORTHO05D004824 1.6e-112 409.8 271 76.4
AL5G16870 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 2.1e-112 409.5 272 75.4
Atru.chr6.2434 Acer truncatum HOM05D001715 ORTHO05D004824 3.5e-112 408.7 269 75.5
CARHR148830 Cardamine hirsuta HOM05D001715 ORTHO05D004824 4.6e-112 408.3 271 75.3
Manes.17G110800 Manihot esculenta HOM05D001715 ORTHO05D004824 6.0e-112 407.9 269 74.7
Glyma.19G055900 Glycine max HOM05D001715 ORTHO05D004824 1.0e-111 407.1 271 74.9
Ca_10003_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 1.8e-111 406.4 270 75.2
Actinidia05979 Actinidia chinensis HOM05D001715 ORTHO05D004824 2.3e-111 406.0 269 72.9
CANSAT64G1664 Cannabis sativa HOM05D001715 ORTHO05D004824 2.3e-111 406.0 269 75.5
Psat3g166200 Pisum sativum HOM05D001715 ORTHO05D004824 2.3e-111 406.0 269 75.1
RcHm_v2.0_Chr2g0123161 Rosa chinensis HOM05D001715 ORTHO05D004824 3.9e-111 405.2 269 75.1
THA.LOC104825315 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 3.9e-111 405.2 271 74.5
Carub.0005s0587 Capsella rubella HOM05D001715 ORTHO05D004824 5.1e-111 404.8 272 75.4
Carub.0007s3497 Capsella rubella HOM05D001715 ORTHO05D004824 5.1e-111 404.8 272 74.3
Thecc.04G019800 Theobroma cacao HOM05D001715 ORTHO05D004824 6.7e-111 404.4 269 74.3
HanXRQChr15g0486831 Helianthus annuus HOM05D001715 ORTHO05D004824 8.7e-111 404.1 268 76.1
Lj1g0020864 Lotus japonicus HOM05D001715 ORTHO05D004824 1.1e-110 403.7 270 74.1
COL.COLO4_29175 Corchorus olitorius HOM05D001715 ORTHO05D004824 1.5e-110 403.3 269 73.6
Glyma.16G069000 Glycine max HOM05D001715 ORTHO05D004824 1.5e-110 403.3 269 73.6
MSTRG.24047 Avicennia marina HOM05D001715 ORTHO05D004824 2.5e-110 402.5 268 72.4
Duzib147G1449 Durio zibethinus HOM05D001715 ORTHO05D004824 2.5e-110 402.5 269 73.6
Sp2g16670 Schrenkiella parvula HOM05D001715 ORTHO05D004824 2.5e-110 402.5 270 74.1
FAN23G2554 Fragaria x ananassa HOM05D001715 ORTHO05D004824 3.3e-110 402.1 280 72.5
BcaC06g33817 Brassica carinata HOM05D001715 ORTHO05D004824 4.3e-110 401.7 270 73.3
BcaC06g30988 Brassica carinata HOM05D001715 ORTHO05D004824 5.6e-110 401.4 272 73.2
AT5G40550 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 7.4e-110 401.0 270 73.7
CiPaw.03G045800 Carya illinoinensis HOM05D001715 ORTHO05D004824 7.4e-110 401.0 269 72.9
Prupe.3G294200 Prunus persica HOM05D001715 ORTHO05D004824 7.4e-110 401.0 271 73.4
THA.LOC104805361 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 7.4e-110 401.0 271 72.7
MD09G1022400 Malus domestica HOM05D001715 ORTHO05D004824 1.3e-109 400.2 270 75.9
VMungo1383G3508 Vigna mungo HOM05D001715 ORTHO05D004824 1.6e-109 399.8 270 73.0
Ciclev10016259m.g Citrus clementina HOM05D001715 ORTHO05D004824 2.8e-109 399.1 272 74.3
Phvul.001G096400 Phaseolus vulgaris HOM05D001715 ORTHO05D004824 2.8e-109 399.1 271 72.3
Lalb_Chr22g0360701 Lupinus albus HOM05D001715 ORTHO05D004824 6.2e-109 397.9 266 72.6
Lalb_Chr24g0403561 Lupinus albus HOM05D001715 ORTHO05D004824 6.2e-109 397.9 267 73.0
A06p41160 Brassica napus HOM05D001715 ORTHO05D003849 8.2e-109 397.5 271 72.7
AL7G49260 Arabidopsis lyrata HOM05D001715 ORTHO05D004824 1.1e-108 397.1 272 72.8
BolC7t44170H Brassica oleracea HOM05D001715 ORTHO05D004824 1.4e-108 396.7 272 72.8
GSVIVG01032368001 Vitis vinifera HOM05D001715 ORTHO05D004824 1.4e-108 396.7 281 71.9
C07p36500 Brassica napus HOM05D001715 ORTHO05D003849 1.8e-108 396.4 271 72.7
Solyc02g093490.3 Solanum lycopersicum HOM05D001715 ORTHO05D004824 1.2e-107 393.7 267 73.4
PGR083G0973 Punica granatum HOM05D001715 ORTHO05D004824 1.5e-107 393.3 269 71.4
Gohir.D11G070100 Gossypium hirsutum HOM05D001715 ORTHO05D004824 2.6e-107 392.5 269 71.4
Gorai.007G075200 Gossypium raimondii HOM05D001715 ORTHO05D004824 2.6e-107 392.5 269 71.4
PGSC0003DMG400012610 Solanum tuberosum HOM05D001715 ORTHO05D004824 3.4e-107 392.1 267 73.0
TWI12G0217 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 4.5e-107 391.7 271 71.6
MSTRG.3136 Avicennia marina HOM05D001715 ORTHO05D004824 1.0e-106 390.6 268 70.9
Thhalv10004728m.g Eutrema salsugineum HOM05D001715 ORTHO05D004824 1.0e-106 390.6 286 69.9
TWI12G0372 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 1.7e-106 389.8 271 71.6
Dinv25723 Davidia involucrata HOM05D001715 ORTHO05D004510 2.2e-106 389.4 260 76.2
TAR374G1502 Trochodendron aralioides HOM05D001715 ORTHO05D004824 2.9e-106 389.0 267 73.0
Gohir.A07G224000 Gossypium hirsutum HOM05D001715 ORTHO05D004824 6.5e-106 387.9 269 71.0
Eucgr.J02260 Eucalyptus grandis HOM05D001715 ORTHO05D004824 8.4e-106 387.5 269 70.3
MD17G1021900 Malus domestica HOM05D001715 ORTHO05D004824 8.4e-106 387.5 270 73.0
Sopen02g038180 Solanum pennellii HOM05D001715 ORTHO05D004824 8.4e-106 387.5 267 73.0
Ah.02g128230 Amaranthus hybridus HOM05D001715 ORTHO05D004824 1.4e-105 386.7 270 72.6
Gohir.D07G231300 Gossypium hirsutum HOM05D001715 ORTHO05D004824 2.5e-105 386.0 269 70.6
Gorai.001G266400 Gossypium raimondii HOM05D001715 ORTHO05D004824 2.5e-105 386.0 269 70.6
Gorai.012G065400 Gossypium raimondii HOM05D001715 ORTHO05D004824 3.2e-105 385.6 269 71.4
TWI12G0250 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 7.1e-105 384.4 271 70.5
TWI12G0380 Tripterygium wilfordii HOM05D001715 ORTHO05D004824 7.1e-105 384.4 271 70.5
Sabra16G0222300 Salix brachista HOM05D001715 ORTHO05D004824 9.3e-105 384.0 296 66.9
Gohir.D04G058700 Gossypium hirsutum HOM05D001715 ORTHO05D004824 2.7e-104 382.5 269 70.6
arahy.Tifrunner.gnm1.ann1.VP8W98 Arachis hypogaea HOM05D001715 ORTHO05D004824 3.5e-104 382.1 269 71.7
Duzib187G0323 Durio zibethinus HOM05D001715 ORTHO05D004824 3.5e-104 382.1 266 70.7
Rhsim10G0014300 Rhododendron simsii HOM05D001715 ORTHO05D004824 3.5e-104 382.1 275 70.9
unitig_748.g6979 Utricularia gibba HOM05D001715 ORTHO05D004824 4.6e-104 381.7 252 75.4
Cfa007336 Carpinus fangiana HOM05D001715 ORTHO05D004824 6.0e-104 381.3 272 68.8
SGA_v2.0_scaffold18G08270 Striga asiatica HOM05D001715 ORTHO05D004824 7.9e-104 380.9 259 72.2
Migut.H00070 Erythranthe guttata HOM05D001715 ORTHO05D004824 1.0e-103 380.6 269 69.5
Lj7A601T103 Lonicera japonica HOM05D001715 ORTHO05D004824 1.0e-103 380.6 291 63.9
vmacro07988 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 1.0e-103 380.6 284 68.7
Gohir.A05G354400 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.3e-103 380.2 269 70.3
Peaxi162Scf00420g00131 Petunia axillaris HOM05D001715 ORTHO05D004824 3.9e-103 378.6 296 65.9
arahy.Tifrunner.gnm1.ann1.Q5RJ9B Arachis hypogaea HOM05D001715 ORTHO05D004824 1.1e-102 377.1 271 71.2
Ca_12396_v3 Cicer arietinum L. HOM05D001715 ORTHO05D004824 1.1e-102 377.1 341 59.2
TAR622G0120 Trochodendron aralioides HOM05D001715 ORTHO05D004824 5.7e-102 374.8 264 72.0
THA.LOC104823958 Tarenaya hassleriana HOM05D001715 ORTHO05D004824 7.4e-102 374.4 267 68.9
QL05p032480 Quercus lobata HOM05D001715 ORTHO05D004824 2.2e-101 372.9 300 63.0
QL05p033603 Quercus lobata HOM05D001715 ORTHO05D004824 2.2e-101 372.9 300 63.0
PSO063G0233 Papaver somniferum HOM05D001715 ORTHO05D004824 3.7e-101 372.1 271 69.4
PSO754G0079 Papaver somniferum HOM05D001715 ORTHO05D004824 3.7e-101 372.1 271 69.4
SHI03767 Sapria himalayana HOM05D001715 ORTHO05D004824 8.2e-101 370.9 262 69.5
Hund15533 Selenicereus undatus HOM05D001715 ORTHO05D004824 1.8e-100 369.8 272 71.0
Aqoxy5G03737 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 3.4e-99 365.5 272 67.3
PGR142G0496 Punica granatum HOM05D001715 ORTHO05D004824 3.4e-99 365.5 268 68.3
Haze_14762 Corylus avellana HOM05D001715 ORTHO05D004824 1.0e-98 364.0 328 58.2
A02p35490 Brassica napus HOM05D001715 ORTHO05D003849 3.2e-97 359.0 270 65.6
C02p54210 Brassica napus HOM05D001715 ORTHO05D003849 3.2e-97 359.0 272 66.5
ClCG10G013770 Citrullus lanatus HOM05D001715 ORTHO05D004824 9.3e-97 357.5 271 69.4
Oeu035801.2 Olea europaea HOM05D001715 ORTHO05D004824 9.3e-97 357.5 233 75.1
HPP92_019596 Vanilla planifolia HOM05D001715 ORTHO05D004824 3.9e-95 352.1 271 65.7
CsaV3_3G042890 Cucumis sativus L. HOM05D001715 ORTHO05D004824 5.1e-95 351.7 271 69.4
CDE07G0729 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 1.1e-94 350.5 268 68.7
CDE04G1703 Ceratophyllum demersum HOM05D001715 ORTHO05D004824 1.5e-94 350.1 268 68.3
MELO3C026589.2 Cucumis melo HOM05D001715 ORTHO05D004824 1.3e-93 347.1 271 69.0
AT3G27460 Arabidopsis thaliana HOM05D001715 ORTHO05D004824 6.3e-93 344.7 242 71.5
Manes.15G152100 Manihot esculenta HOM05D001715 ORTHO05D004824 1.1e-92 344.0 235 71.9
Cpa.g.sc108.80 Carica papaya HOM05D001715 ORTHO05D004824 1.8e-92 343.2 231 71.9
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 9.1e-92 340.9 272 63.6
BraA02t08550Z Brassica rapa HOM05D001715 ORTHO05D003849 2.0e-91 339.7 318 57.9
BcaB07g30155 Brassica carinata HOM05D001715 ORTHO05D004824 4.5e-91 338.6 278 65.5
Zm00001eb409000 Zea mays HOM05D001715 ORTHO05D004824 4.5e-91 338.6 266 65.4
BolC2t11484H Brassica oleracea HOM05D001715 ORTHO05D004824 1.0e-90 337.4 278 64.4
AUR62033204 Chenopodium quinoa HOM05D001715 ORTHO05D004824 6.5e-90 334.7 330 56.4
Sc03g0007260 Simmondsia chinensis HOM05D001715 ORTHO05D004824 2.5e-89 332.8 230 75.2
BraA06t27038Z Brassica rapa HOM05D001715 ORTHO05D004824 7.2e-89 331.3 233 70.4
Gohir.A11G065900 Gossypium hirsutum HOM05D001715 ORTHO05D004824 7.2e-89 331.3 230 70.0
CAN.G473.27 Capsicum annuum HOM05D001715 ORTHO05D004824 2.3e-87 326.2 232 70.7
ATR0824G003 Amborella trichopoda HOM05D001715 ORTHO05D004824 4.4e-86 322.0 274 64.2
MBI11_g21317_MAGBIO Magnolia biondii HOM05D001715 ORTHO05D004824 2.4e-84 316.2 358 51.7
BcaC03g17465 Brassica carinata HOM05D001715 ORTHO05D003849 8.5e-82 307.8 263 61.6
Nitab4.5_0006683g0120 Nicotiana tabacum HOM05D001715 ORTHO05D004824 1.9e-81 306.6 268 62.3
Os12g0290600 Oryza sativa ssp. japonica HOM05D001715 ORTHO05D004824 4.7e-80 302.0 267 58.8
QL02p073949 Quercus lobata HOM05D001715 ORTHO05D004824 3.3e-78 295.8 347 48.4
Sed0015141 Sechium edule HOM05D001715 ORTHO05D004824 4.4e-78 295.4 232 65.9
arahy.Tifrunner.gnm1.ann1.3H0FM5 Arachis hypogaea HOM05D001715 ORTHO05D004824 1.3e-77 293.9 289 55.0
Nn4g22578 Nelumbo nucifera HOM05D001715 ORTHO05D004824 1.6e-75 287.0 225 66.2
FAN26G1929 Fragaria x ananassa HOM05D001715 ORTHO05D004824 2.6e-75 286.2 282 55.7
Peaxi162Scf00700g00435 Petunia axillaris HOM05D001715 ORTHO05D004824 3.8e-74 282.3 228 65.4
CSS0002803 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 2.7e-72 276.2 175 78.9
SGA_v2.0_scaffold47G17520 Striga asiatica HOM05D001715 ORTHO05D004824 2.3e-71 273.1 230 63.0
AUR62041236 Chenopodium quinoa HOM05D001715 ORTHO05D004824 1.3e-66 257.3 201 67.7
Duzib187G0149 Durio zibethinus HOM05D001715 ORTHO05D004824 8.5e-66 254.6 204 64.2
Rhsim08G0048300 Rhododendron simsii HOM05D001715 ORTHO05D004824 1.5e-65 253.8 267 51.7
Medtr7g033170 Medicago truncatula HOM05D001715 ORTHO05D004824 4.2e-65 252.3 171 74.3
SEGI_05213 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 2.1e-64 250.0 258 55.0
Duzib264G0165 Durio zibethinus HOM05D001715 ORTHO05D004824 6.1e-64 248.4 180 67.8
SMO119G0416 Selaginella moellendorffii HOM05D001715 ORTHO05D004824 1.4e-63 247.3 274 50.7
Pp3c18_8800 Physcomitrium patens HOM05D001715 ORTHO05D004824 3.1e-60 236.1 260 50.0
Pp3c21_7830 Physcomitrium patens HOM05D001715 ORTHO05D004824 1.2e-59 234.2 260 48.8
Mapoly0074s0018 Marchantia polymorpha HOM05D001715 ORTHO05D004824 5.9e-59 231.9 269 49.8
Gorai.001G266500 Gossypium raimondii HOM05D001715 ORTHO05D004824 1.1e-57 227.6 175 66.3
ECA232G3480 Erigeron canadensis HOM05D001715 ORTHO05D004824 9.5e-57 224.6 130 82.3
Nitab4.5_0001562g0140 Nicotiana tabacum HOM05D001715 ORTHO05D004824 2.8e-56 223.0 161 68.9
EL10As9g23941 Beta vulgaris HOM05D001715 ORTHO05D004824 1.5e-54 217.2 169 66.3
PSO478G2184 Papaver somniferum HOM05D001715 ORTHO05D004824 1.3e-53 214.2 161 65.8
Cc07_g20220 Coffea canephora HOM05D001715 ORTHO05D004824 2.2e-53 213.4 213 56.8
BolC2t11492H Brassica oleracea HOM05D001715 ORTHO05D004824 3.1e-52 209.5 160 65.6
Rhsim10G0017400 Rhododendron simsii HOM05D001715 ORTHO05D004824 4.1e-52 209.1 254 50.8
vmacro18295 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 8.6e-50 201.4 201 56.2
C02p54270 Brassica napus HOM05D001715 ORTHO05D004824 3.3e-49 199.5 153 65.4
AagrBONN_evm.TU.Sc2ySwM_344.5345 Anthoceros agrestis HOM05D001715 ORTHO05D004824 6.8e-47 191.8 199 51.8
CBR_g1018 Chara braunii HOM05D001161 ORTHO05D000497 2.4e-44 183.3 150 66.0
SGA_v2.0_scaffold135G34914 Striga asiatica HOM05D001715 ORTHO05D004824 9.5e-41 171.4 131 64.9
Gohir.D07G231366 Gossypium hirsutum HOM05D001715 ORTHO05D004824 1.2e-40 171.0 125 67.2
Aa31LG9G1060 Aethionema arabicum HOM05D004782 ORTHO05D005498 4.4e-38 162.5 230 43.9
vmacro18298 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 1.4e-36 157.5 181 46.4
SEGI_27231 Sequoiadendron giganteum HOM05D001715 ORTHO05D004824 1.3e-34 151.0 139 56.1
vmacro18296 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 3.0e-34 149.8 160 50.0
SGA_v2.0_scaffold131G34424 Striga asiatica HOM05D001715 ORTHO05D004824 1.1e-31 141.4 269 37.5
Oeu033726.1 Olea europaea HOM05D001715 ORTHO05D004824 7.5e-30 135.2 88 77.3
CiPaw.15G158300 Carya illinoinensis HOM05D001715 ORTHO05D004824 3.5e-27 126.3 91 72.5
Oeu021199.1 Olea europaea HOM05D001715 ORTHO05D004824 6.8e-23 112.1 74 71.6
Aqoxy3G03035 Aquilegia oxysepala HOM05D001715 ORTHO05D004824 8.9e-23 111.7 148 45.9
CiPaw.15G157800 Carya illinoinensis HOM05D001715 ORTHO05D004824 1.2e-22 111.3 69 75.4
Oeu043035.1 Olea europaea HOM05D001715 ORTHO05D004824 7.1e-20 102.1 74 70.3
vmacro18297 Vaccinium macrocarpon HOM05D001715 ORTHO05D004824 6.0e-19 99.0 67 71.6
Mapoly0009s0091 Marchantia polymorpha HOM05D001715 ORTHO05D004824 1.0e-18 98.2 150 41.3
CSS0027227 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 3.3e-09 66.6 137 35.0
HPP92_019650 Vanilla planifolia HOM05D001715 ORTHO05D004824 2.1e-08 63.9 122 34.4
SEGI_06119 Sequoiadendron giganteum HOM05D001715 ORTHO05D000497 8.1e-08 62.0 41 70.7
CSS0014250 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 3.4e-06 56.6 34 79.4
CSS0016932 Camellia sinensis var. sinensis HOM05D001715 ORTHO05D004824 5.8e-06 55.8 41 61.0


User provided reference genes

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