Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_014156 Daucus carota HOM05D001174 ORTHO05D001003 1.6e-60 235.7 107 100.0
Lj4C258T9 Lonicera japonica HOM05D001174 ORTHO05D001003 1.7e-38 162.5 95 68.4
vmacro20635 Vaccinium macrocarpon HOM05D001174 ORTHO05D001003 5.6e-37 157.5 93 68.8
Sc11g0004670 Simmondsia chinensis HOM05D001174 ORTHO05D001003 1.2e-36 156.4 98 66.3
Dinv28177 Davidia involucrata HOM05D001174 ORTHO05D000292 2.1e-36 155.6 98 65.3
Nn3g18430 Nelumbo nucifera HOM05D001174 ORTHO05D001003 4.7e-36 154.5 93 64.5
MD09G1267100 Malus domestica HOM05D001174 ORTHO05D001003 1.1e-35 153.3 94 66.0
CsaV3_3G001180 Cucumis sativus L. HOM05D001174 ORTHO05D001003 5.2e-35 151.0 97 69.1
MELO3C013808.2 Cucumis melo HOM05D001174 ORTHO05D001003 9.0e-35 150.2 97 69.1
Prupe.3G164800 Prunus persica HOM05D001174 ORTHO05D001003 9.0e-35 150.2 94 66.0
Atru.chr1.2010 Acer truncatum HOM05D001174 ORTHO05D001003 1.2e-34 149.8 97 66.0
GSVIVG01030666001 Vitis vinifera HOM05D001174 ORTHO05D001003 2.0e-34 149.1 94 64.9
CAN.G222.78 Capsicum annuum HOM05D001174 ORTHO05D001003 3.4e-34 148.3 102 58.8
Ciclev10007029m.g Citrus clementina HOM05D001174 ORTHO05D001003 3.4e-34 148.3 93 66.7
Duzib093G1066 Durio zibethinus HOM05D001174 ORTHO05D001003 4.4e-34 147.9 94 64.9
FAN28G1611 Fragaria x ananassa HOM05D001174 ORTHO05D001003 5.8e-34 147.5 93 66.7
Rhsim10G0180900 Rhododendron simsii HOM05D001174 ORTHO05D001003 5.8e-34 147.5 93 63.4
RcHm_v2.0_Chr3g0492331 Rosa chinensis HOM05D001174 ORTHO05D001003 5.8e-34 147.5 93 65.6
TAR371G0619 Trochodendron aralioides HOM05D001174 ORTHO05D001003 5.8e-34 147.5 96 61.5
Sabra17G0111100 Salix brachista HOM05D001174 ORTHO05D001003 7.6e-34 147.1 92 68.5
Sabra17G0114100 Salix brachista HOM05D001174 ORTHO05D001003 7.6e-34 147.1 92 68.5
CSS0050231 Camellia sinensis var. sinensis HOM05D001174 ORTHO05D001003 9.9e-34 146.7 95 60.0
Cpa.g.sc87.13 Carica papaya HOM05D001174 ORTHO05D001003 9.9e-34 146.7 94 61.7
FAN23G2924 Fragaria x ananassa HOM05D001174 ORTHO05D001003 9.9e-34 146.7 93 65.6
Manes.01G121000 Manihot esculenta HOM05D001174 ORTHO05D001003 9.9e-34 146.7 97 62.9
FAN19G2209 Fragaria x ananassa HOM05D001174 ORTHO05D001003 1.3e-33 146.4 93 65.6
Oeu012497.1 Olea europaea HOM05D001174 ORTHO05D001003 1.7e-33 146.0 94 66.0
Thecc.08G138800 Theobroma cacao HOM05D001174 ORTHO05D001003 1.7e-33 146.0 94 63.8
QL02p059620 Quercus lobata HOM05D001174 ORTHO05D001003 2.2e-33 145.6 93 65.6
PGSC0003DMG400013247 Solanum tuberosum HOM05D001174 ORTHO05D001003 2.2e-33 145.6 88 63.6
AUR62037364 Chenopodium quinoa HOM05D001174 ORTHO05D001003 2.9e-33 145.2 97 63.9
AUR62042690 Chenopodium quinoa HOM05D001174 ORTHO05D001003 2.9e-33 145.2 98 63.3
FAN26G1916 Fragaria x ananassa HOM05D001174 ORTHO05D001003 2.9e-33 145.2 93 64.5
Cc07_g13160 Coffea canephora HOM05D001174 ORTHO05D001003 4.9e-33 144.4 96 64.6
MBI13_g04214_MAGBIO Magnolia biondii HOM05D001174 ORTHO05D001003 4.9e-33 144.4 93 61.3
Nitab4.5_0009898g0040 Nicotiana tabacum HOM05D001174 ORTHO05D001003 4.9e-33 144.4 97 60.8
Actinidia17192 Actinidia chinensis HOM05D001174 ORTHO05D001003 6.4e-33 144.1 94 62.8
Nitab4.5_0001438g0110 Nicotiana tabacum HOM05D001174 ORTHO05D001003 6.4e-33 144.1 97 61.9
Potri.017G135200 Populus trichocarpa HOM05D001174 ORTHO05D001003 6.4e-33 144.1 92 66.3
Solyc11g011560.3 Solanum lycopersicum HOM05D001174 ORTHO05D001003 6.4e-33 144.1 88 62.5
Sopen11g006430 Solanum pennellii HOM05D001174 ORTHO05D001003 6.4e-33 144.1 88 62.5
Sed0024967 Sechium edule HOM05D001174 ORTHO05D001003 3.2e-32 141.7 94 64.9
ClCG10G001160 Citrullus lanatus HOM05D001174 ORTHO05D001003 1.2e-31 139.8 96 65.6
Haze_14291 Corylus avellana HOM05D001174 ORTHO05D001003 1.6e-31 139.4 94 62.8
Aqoxy2G00632 Aquilegia oxysepala HOM05D001174 ORTHO05D001003 3.5e-31 138.3 93 61.3
EL10Ac9g20685 Beta vulgaris HOM05D001174 ORTHO05D001003 7.8e-31 137.1 97 59.8
TWI77G0649 Tripterygium wilfordii HOM05D001174 ORTHO05D001003 1.0e-30 136.7 94 62.8
Cfa007781 Carpinus fangiana HOM05D001174 ORTHO05D001003 2.3e-30 135.6 94 59.6
Lsat_1_v5_gn_3_65760 Lactuca sativa HOM05D001174 ORTHO05D001003 2.3e-30 135.6 92 60.9
Peaxi162Scf00124g01724 Petunia axillaris HOM05D001174 ORTHO05D001003 3.0e-30 135.2 101 58.4
Nitab4.5_0001650g0070 Nicotiana tabacum HOM05D001174 ORTHO05D001003 8.7e-30 133.7 90 61.1
Ca_05841_v3 Cicer arietinum L. HOM05D001174 ORTHO05D001003 1.1e-29 133.3 96 56.2
Medtr5g077750 Medicago truncatula HOM05D001174 ORTHO05D001003 1.1e-29 133.3 96 54.2
SGA_v2.0_scaffold108G30973 Striga asiatica HOM05D001174 ORTHO05D001003 1.9e-29 132.5 87 59.8
Migut.H02233 Erythranthe guttata HOM05D001174 ORTHO05D001003 3.3e-29 131.7 99 58.6
Rhsim10G0196400 Rhododendron simsii HOM05D001174 ORTHO05D001003 4.3e-29 131.3 97 55.7
CANSAT54G1561 Cannabis sativa HOM05D001174 ORTHO05D001003 1.3e-28 129.8 97 59.8
HanXRQChr15g0483001 Helianthus annuus HOM05D001174 ORTHO05D001003 1.6e-28 129.4 92 57.6
THA.LOC104805977 Tarenaya hassleriana HOM05D001174 ORTHO05D001003 2.1e-28 129.0 95 58.9
TPR.G11027 Trifolium pratense HOM05D001174 ORTHO05D001003 2.1e-28 129.0 98 53.1
Aa31LG2G2880 Aethionema arabicum HOM05D001174 ORTHO05D001003 4.8e-28 127.9 94 57.4
PGR042G2215 Punica granatum HOM05D001174 ORTHO05D001003 6.2e-28 127.5 92 55.4
AT1G66170 Arabidopsis thaliana HOM05D001174 ORTHO05D001003 1.1e-27 126.7 94 55.3
arahy.Tifrunner.gnm1.ann1.7R2T36 Arachis hypogaea HOM05D001174 ORTHO05D001003 1.8e-27 125.9 96 50.0
Carub.0002s1216 Capsella rubella HOM05D001174 ORTHO05D001003 1.8e-27 125.9 94 55.3
VMungo0647G2455 Vigna mungo HOM05D001174 ORTHO05D001003 1.8e-27 125.9 93 52.7
CiPaw.03G074800 Carya illinoinensis HOM05D001174 ORTHO05D001003 4.0e-27 124.8 97 58.8
Thhalv10018197m.g Eutrema salsugineum HOM05D001174 ORTHO05D001003 6.9e-27 124.0 94 55.3
CSS0048326 Camellia sinensis var. sinensis HOM05D001174 ORTHO05D001003 1.2e-26 123.2 93 52.7
Sp5g21230 Schrenkiella parvula HOM05D001174 ORTHO05D001003 1.2e-26 123.2 94 53.2
arahy.Tifrunner.gnm1.ann1.TSBJ8P Arachis hypogaea HOM05D001174 ORTHO05D001003 1.5e-26 122.9 96 49.0
Phvul.008G238400 Phaseolus vulgaris HOM05D001174 ORTHO05D001003 1.5e-26 122.9 93 51.6
Lalb_Chr10g0104241 Lupinus albus HOM05D001174 ORTHO05D001003 2.0e-26 122.5 95 51.6
Glyma.02G243200 Glycine max HOM05D001174 ORTHO05D001003 3.4e-26 121.7 94 52.1
Psat2g046160 Pisum sativum HOM05D001174 ORTHO05D001003 3.4e-26 121.7 96 50.0
CARHR292300 Cardamine hirsuta HOM05D001174 ORTHO05D001003 4.5e-26 121.3 94 54.3
LjContig00141g0000877 Lotus japonicus HOM05D001174 ORTHO05D001003 5.8e-26 120.9 96 50.0
CDE05G2775 Ceratophyllum demersum HOM05D001174 ORTHO05D001003 9.9e-26 120.2 96 50.0
Glyma.14G212300 Glycine max HOM05D001174 ORTHO05D001003 1.3e-25 119.8 94 51.1
Atru.chr11.817 Acer truncatum HOM05D001174 ORTHO05D001003 2.2e-25 119.0 91 52.7
BcaB05g24156 Brassica carinata HOM05D001174 ORTHO05D001003 3.8e-25 118.2 94 52.1
Gorai.013G106900 Gossypium raimondii HOM05D001174 ORTHO05D001003 4.9e-25 117.9 78 65.4
SEGI_11319 Sequoiadendron giganteum HOM05D001174 ORTHO05D001003 4.9e-25 117.9 88 56.8
PSO017G0079 Papaver somniferum HOM05D001174 ORTHO05D001003 6.4e-25 117.5 118 45.8
AL2G23810 Arabidopsis lyrata HOM05D001174 ORTHO05D001003 8.4e-25 117.1 94 51.1
A02p13500 Brassica napus HOM05D001174 ORTHO05D001003 1.4e-24 116.3 94 50.0
BraA02t06408Z Brassica rapa HOM05D001174 ORTHO05D001003 1.4e-24 116.3 94 50.0
Gohir.A02G108901 Gossypium hirsutum HOM05D001174 ORTHO05D001003 1.4e-24 116.3 78 65.4
SHI30122 Sapria himalayana HOM05D001174 ORTHO05D001003 1.9e-24 115.9 92 50.0
Dinv05358 Davidia involucrata HOM05D001174 ORTHO05D001003 3.2e-24 115.2 91 54.9
C02p21800 Brassica napus HOM05D001174 ORTHO05D001003 4.2e-24 114.8 94 50.0
Hma1.2p1_1450F.1_g284190 Hydrangea macrophylla HOM05D001174 ORTHO05D001003 5.4e-24 114.4 93 52.7
Gohir.D03G062000 Gossypium hirsutum HOM05D001174 ORTHO05D001003 7.1e-24 114.0 78 62.8
Ciclev10017749m.g Citrus clementina HOM05D001174 ORTHO05D001003 1.2e-23 113.2 93 51.6
Eucgr.J01622 Eucalyptus grandis HOM05D001174 ORTHO05D001003 2.7e-23 112.1 95 47.4
BcaC03g14733 Brassica carinata HOM05D001174 ORTHO05D001003 1.0e-22 110.2 94 47.9
BolC2t08313H Brassica oleracea HOM05D001174 ORTHO05D001003 1.0e-22 110.2 94 47.9
Nitab4.5_0002257g0040 Nicotiana tabacum HOM05D001174 ORTHO05D001003 1.8e-22 109.4 95 50.5
AagrBONN_evm.TU.Sc2ySwM_362.680 Anthoceros agrestis HOM05D001174 ORTHO05D001003 2.3e-22 109.0 89 53.9
Nitab4.5_0006574g0070 Nicotiana tabacum HOM05D001174 ORTHO05D001003 3.9e-22 108.2 95 51.6
AagrBONN_evm.TU.Sc2ySwM_362.679 Anthoceros agrestis HOM05D001174 ORTHO05D001003 5.1e-22 107.8 99 46.5
SEGI_30421 Sequoiadendron giganteum HOM05D001174 ORTHO05D001003 5.1e-22 107.8 92 44.6
PSO063G2555 Papaver somniferum HOM05D001174 ORTHO05D001003 5.6e-21 104.4 107 46.7
Cpa.g.sc87.36 Carica papaya HOM05D001174 ORTHO05D001003 9.6e-21 103.6 69 60.9
PGSC0003DMG400000605 Solanum tuberosum HOM05D001174 ORTHO05D001003 1.6e-20 102.8 95 50.5
CAN.G407.108 Capsicum annuum HOM05D001174 ORTHO05D001003 4.8e-20 101.3 97 48.5
Cpa.g.sc2.163 Carica papaya HOM05D001174 ORTHO05D001003 4.8e-20 101.3 92 45.7
Pp3c9_20410 Physcomitrium patens HOM05D001174 ORTHO05D001003 6.2e-20 100.9 92 51.1
THA.LOC104824122 Tarenaya hassleriana HOM05D001174 ORTHO05D001003 1.4e-19 99.8 93 46.2
SMO356G0690 Selaginella moellendorffii HOM05D001174 ORTHO05D001003 2.4e-19 99.0 90 45.6
Pp3c15_21830 Physcomitrium patens HOM05D001174 ORTHO05D001003 3.1e-19 98.6 91 47.3
Lalb_Chr17g0346001 Lupinus albus HOM05D001174 ORTHO05D001003 1.2e-18 96.7 96 42.7
Hma1.2p1_0049F.1_g028520 Hydrangea macrophylla HOM05D001174 ORTHO05D001003 1.5e-18 96.3 92 46.7
RcHm_v2.0_Chr3g0450161 Rosa chinensis HOM05D001174 ORTHO05D001003 4.5e-18 94.7 81 50.6
FAN14G1145 Fragaria x ananassa HOM05D001174 ORTHO05D001003 2.2e-17 92.4 80 50.0
FAN14G3328 Fragaria x ananassa HOM05D001174 ORTHO05D001003 2.2e-17 92.4 80 50.0
Potri.008G137200 Populus trichocarpa HOM05D001174 ORTHO05D001003 2.2e-17 92.4 95 45.3
FAN05G3615 Fragaria x ananassa HOM05D004756 ORTHO05D005793 2.9e-17 92.0 79 50.6
Sabra08G0104600 Salix brachista HOM05D001174 ORTHO05D001003 6.4e-17 90.9 94 45.7
FAN05G0569 Fragaria x ananassa HOM05D001174 ORTHO05D001003 8.4e-17 90.5 80 50.0
Rhsim10G0198200 Rhododendron simsii HOM05D001174 ORTHO05D001003 8.4e-17 90.5 91 49.5
FAN09G0888 Fragaria x ananassa HOM05D004756 ORTHO05D005793 1.1e-16 90.1 82 45.1
Oeu006311.1 Olea europaea HOM05D001174 ORTHO05D001003 1.1e-16 90.1 80 50.0
Solyc03g116440.3 Solanum lycopersicum HOM05D001174 ORTHO05D001003 1.4e-16 89.7 63 58.7
Mapoly0039s0094 Marchantia polymorpha HOM05D001174 ORTHO05D001003 3.2e-16 88.6 90 44.4
Peaxi162Scf00274g00853 Petunia axillaris HOM05D001174 ORTHO05D001003 4.2e-16 88.2 95 42.1
Rhsim10G0198500 Rhododendron simsii HOM05D001174 ORTHO05D001003 5.5e-16 87.8 91 47.3
SEGI_22597 Sequoiadendron giganteum HOM05D001174 ORTHO05D001003 7.1e-16 87.4 80 46.2
ATR0021G020 Amborella trichopoda HOM05D001174 ORTHO05D001003 1.2e-15 86.7 80 45.0
ATR0021G049 Amborella trichopoda HOM05D001174 ORTHO05D001003 1.2e-15 86.7 80 45.0
SalBow2G0162 Salvia bowleyana HOM05D001174 ORTHO05D001003 1.2e-15 86.7 87 46.0
SGA_v2.0_scaffold23G10157 Striga asiatica HOM05D001174 ORTHO05D001003 2.1e-15 85.9 86 46.5
Hma1.2p1_0895F.1_g233720 Hydrangea macrophylla HOM05D001174 ORTHO05D001003 3.5e-15 85.1 98 40.8
FAN02G3809 Fragaria x ananassa HOM05D001174 ORTHO05D001003 4.6e-15 84.7 80 45.0
Hma1.2p1_0066F.1_g035730 Hydrangea macrophylla HOM05D001174 ORTHO05D001003 3.0e-14 82.0 67 52.2
CARHR287150 Cardamine hirsuta HOM05D001174 ORTHO05D001003 3.9e-14 81.6 94 43.6
Aqoxy2G00515 Aquilegia oxysepala HOM05D001174 ORTHO05D001003 1.5e-13 79.7 82 48.8
SHI04348 Sapria himalayana HOM05D001174 ORTHO05D001003 2.5e-13 79.0 62 48.4
AL5G10920 Arabidopsis lyrata HOM05D001174 ORTHO05D001003 3.3e-13 78.6 98 40.8
Migut.E00500 Erythranthe guttata HOM05D001174 ORTHO05D001003 5.6e-13 77.8 64 50.0
Thhalv10003728m.g Eutrema salsugineum HOM05D001174 ORTHO05D001003 7.4e-13 77.4 99 38.4
PSO063G0042 Papaver somniferum HOM05D001174 ORTHO05D001003 2.1e-12 75.9 90 43.3
Carub.0005s0077 Capsella rubella HOM05D001174 ORTHO05D001003 2.8e-12 75.5 68 47.1
PSO832G0326 Papaver somniferum HOM05D001174 ORTHO05D001003 2.8e-12 75.5 90 43.3
CBR_g137 Chara braunii HOM05D001190 ORTHO05D001764 4.8e-12 74.7 92 39.1
AT2G01810 Arabidopsis thaliana HOM05D001174 ORTHO05D001003 8.2e-12 73.9 97 39.2
CARHR144360 Cardamine hirsuta HOM05D001174 ORTHO05D001003 4.0e-11 71.6 79 44.3
BcaC06g31277 Brassica carinata HOM05D001174 ORTHO05D001003 5.3e-11 71.2 98 35.7
Eucgr.G02081 Eucalyptus grandis HOM05D001174 ORTHO05D001003 9.0e-11 70.5 68 42.6
HanXRQChr08g0224541 Helianthus annuus HOM05D001174 ORTHO05D001003 9.0e-11 70.5 87 44.8
arahy.Tifrunner.gnm1.ann1.0IX9E9 Arachis hypogaea HOM05D001174 ORTHO05D001003 3.4e-10 68.6 88 39.8
MBI19_g27701_MAGBIO Magnolia biondii HOM05D001174 ORTHO05D001003 3.4e-10 68.6 89 39.3
Lsat_1_v5_gn_8_36300 Lactuca sativa HOM05D001174 ORTHO05D001003 1.0e-09 67.0 104 37.5
Sp2g13240 Schrenkiella parvula HOM05D001174 ORTHO05D001003 1.3e-09 66.6 68 42.6
arahy.Tifrunner.gnm1.ann1.TL38SF Arachis hypogaea HOM05D001174 ORTHO05D001003 1.7e-09 66.2 88 38.6
Glyma.02G107600 Glycine max HOM05D001174 ORTHO05D001003 4.9e-09 64.7 88 37.5
VMungo1215G3405 Vigna mungo HOM05D001174 ORTHO05D001003 1.1e-08 63.5 87 37.9
Aqoxy3G00778 Aquilegia oxysepala HOM05D001174 ORTHO05D001003 1.4e-08 63.2 91 36.3
BcaC06g34117 Brassica carinata HOM05D001174 ORTHO05D001003 1.4e-08 63.2 96 34.4
C07p32520 Brassica napus HOM05D001174 ORTHO05D001003 1.4e-08 63.2 96 34.4
BolC7t43779H Brassica oleracea HOM05D001174 ORTHO05D001003 1.4e-08 63.2 96 34.4
Mapoly0006s0138 Marchantia polymorpha HOM05D001174 ORTHO05D001003 1.4e-08 63.2 91 37.4
QL03p039232 Quercus lobata HOM05D001174 ORTHO05D001003 2.5e-08 62.4 88 38.6
Cfa022224 Carpinus fangiana HOM05D001174 ORTHO05D001003 5.5e-08 61.2 91 36.3
Aa31LG2G8100 Aethionema arabicum HOM05D001174 ORTHO05D001003 1.2e-07 60.1 89 36.0
Phvul.002G085000 Phaseolus vulgaris HOM05D001174 ORTHO05D001003 1.2e-07 60.1 87 36.8
Aqoxy3G03998 Aquilegia oxysepala HOM05D001174 ORTHO05D001003 1.6e-07 59.7 90 38.9
A06p44100 Brassica napus HOM05D001174 ORTHO05D001003 1.6e-07 59.7 98 31.6
BraA06t27284Z Brassica rapa HOM05D001174 ORTHO05D001003 1.6e-07 59.7 98 31.6
Eucgr.B02649 Eucalyptus grandis HOM05D001174 ORTHO05D001003 2.7e-07 58.9 91 35.2
CiPaw.06G058200 Carya illinoinensis HOM05D001174 ORTHO05D001003 3.5e-07 58.5 88 33.0
Lsat_1_v5_gn_8_34381 Lactuca sativa HOM05D001174 ORTHO05D001003 3.5e-07 58.5 87 32.2
PGR142G4168 Punica granatum HOM05D001174 ORTHO05D001003 7.9e-07 57.4 67 35.8
Duzib205G0700 Durio zibethinus HOM05D001174 ORTHO05D001003 1.0e-06 57.0 88 29.5
Thecc.03G278400 Theobroma cacao HOM05D001174 ORTHO05D001003 1.0e-06 57.0 88 31.8
BcaC03g17075 Brassica carinata HOM05D001174 ORTHO05D001003 1.3e-06 56.6 69 42.0
ECA233G6154 Erigeron canadensis HOM05D001174 ORTHO05D001003 1.8e-06 56.2 87 32.2
MD13G1047400 Malus domestica HOM05D001174 ORTHO05D001003 1.8e-06 56.2 70 40.0
C02p49930 Brassica napus HOM05D001174 ORTHO05D001003 3.0e-06 55.5 67 40.3
DCAR_030292 Daucus carota HOM05D001174 ORTHO05D001003 3.0e-06 55.5 66 34.8
TAR629G3084 Trochodendron aralioides HOM05D001174 ORTHO05D001003 3.0e-06 55.5 92 35.9


User provided reference genes

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