Gene: Nitab4.5_0009898g0040

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0009898g0040
  • Transcript Identifier Nitab4.5_0009898g0040.1
  • Gene Type Coding gene
  • Location Nitab4.5_0009898 : 59299-62576 : negative

Gene Family Information

  • ID HOM05D001174
  • #Genes/#Species 529/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0009898g0040.1
  • SR1-identifier Nta10g00780.1

Descriptions

  • Description Zinc finger, PHD-type, Zinc finger, FYVE/PHD-type, Zinc finger, RING/FYVE/PHD-type, Zinc finger, PHD-type, conserved site
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007060
ISO
PLAZA Integrative Orthologymale meiosis chromosome segregation AT1G66170
GO:0010032
ISO
PLAZA Integrative Orthologymeiotic chromosome condensation AT1G66170
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT1G66170
GO:0000212
ISO
PLAZA Integrative Orthologymeiotic spindle organization AT1G66170
GO:0051321
ISO
PLAZA Integrative Orthologymeiotic cell cycle AT1G66170
GO:0048235
ISO
PLAZA Integrative Orthologypollen sperm cell differentiation AT1G66170

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G66170
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT1G66170
GO:1990188
ISO
PLAZA Integrative Orthologyeuchromatin binding AT1G66170
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT1G66170
GO:0042393
ISO
PLAZA Integrative Orthologyhistone binding AT1G66170

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G66170
GO:0000791
ISO
PLAZA Integrative Orthologyeuchromatin AT1G66170

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001965 Zinc finger, PHD-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR011011 Zinc finger, FYVE/PHD-type
Mapman id Description
13.3.5.1.3 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic initiation.transcription factor (MMD1/DUET)
15.5.29 RNA biosynthesis.transcriptional regulation.transcription factor (PHD)