Gene: AT1G66170

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G66170
  • Transcript Identifier AT1G66170.1
  • Gene Type Coding gene
  • Location Chr1 : 24638793-24641222 : negative

Gene Family Information

  • ID HOM05D001174
  • #Genes/#Species 529/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G66170.1
  • symbol MMD1
  • full_name MALE MEIOCYTE DEATH 1
  • uniprot Q7X6Y7

Descriptions

  • Description RING/FYVE/PHD zinc finger superfamily protein
  • Computational description MALE MEIOCYTE DEATH 1 (MMD1); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: microsporogenesis, regulation of transcription, DNA-dependent, male meiosis; LOCATED IN: nucleus; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT2G01810.1); Has 932 Blast hits to 913 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 337; Fungi - 321; Plants - 250; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007060
IMP
Gene Ontologymale meiosis chromosome segregation1
GO:0048235
IMP
Gene Ontologypollen sperm cell differentiation1
GO:0000212
IGI
Gene Ontologymeiotic spindle organization2
GO:0006355
IMP
Gene Ontologyregulation of transcription, DNA-templated2
GO:0051321
IGI
Gene Ontologymeiotic cell cycle2
GO:0010032
IMP
Gene Ontologymeiotic chromosome condensation3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IPI
Gene OntologyDNA binding2
GO:0042393
IDA
Gene Ontologyhistone binding2
GO:0043565
IDA
Gene Ontologysequence-specific DNA binding2
GO:1990188
IDA
Gene Ontologyeuchromatin binding2
GO:0000976
IDA
Gene Ontologytranscription cis-regulatory region binding3
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus1
GO:0000791
IDA
Gene Ontologyeuchromatin2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001965 Zinc finger, PHD-type
IPR011011 Zinc finger, FYVE/PHD-type
IPR019787 Zinc finger, PHD-finger
Mapman id Description
13.3.5.1.3 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic initiation.transcription factor (MMD1/DUET)
15.5.29 RNA biosynthesis.transcriptional regulation.transcription factor (PHD)