Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013571 Daucus carota HOM05D005041 ORTHO05D006003 4.2e-228 794.3 379 100.0
Dinv26517 Davidia involucrata HOM05D005041 ORTHO05D006003 1.3e-192 676.4 378 83.1
CSS0038733 Camellia sinensis var. sinensis HOM05D005041 ORTHO05D006003 1.1e-191 673.3 379 81.5
Actinidia11183 Actinidia chinensis HOM05D005041 ORTHO05D006003 1.9e-188 662.5 379 80.2
Atru.chr6.3564 Acer truncatum HOM05D005041 ORTHO05D006003 4.2e-188 661.4 379 79.9
Ciclev10015615m.g Citrus clementina HOM05D005041 ORTHO05D006003 6.1e-187 657.5 377 79.6
TWI63G0392 Tripterygium wilfordii HOM05D005041 ORTHO05D006003 3.0e-186 655.2 377 80.1
Thecc.01G157600 Theobroma cacao HOM05D005041 ORTHO05D006003 4.0e-186 654.8 379 81.3
Nn3g21016 Nelumbo nucifera HOM05D005041 ORTHO05D006003 3.4e-185 651.7 379 79.4
COL.COLO4_33676 Corchorus olitorius HOM05D005041 ORTHO05D006003 4.4e-185 651.4 379 80.5
Hma1.2p1_0178F.1_g078240 Hydrangea macrophylla HOM05D005041 ORTHO05D006003 1.3e-184 649.8 378 80.7
GSVIVG01020787001 Vitis vinifera HOM05D005041 ORTHO05D006003 1.7e-184 649.4 379 79.9
Gorai.011G123100 Gossypium raimondii HOM05D005041 ORTHO05D006003 8.3e-184 647.1 379 80.5
Eucgr.K01189 Eucalyptus grandis HOM05D005041 ORTHO05D006003 2.4e-183 645.6 379 78.6
Gohir.D10G111500 Gossypium hirsutum HOM05D005041 ORTHO05D006003 4.1e-183 644.8 379 80.2
MELO3C031066.2 Cucumis melo HOM05D005041 ORTHO05D006003 9.1e-183 643.7 379 78.6
Gohir.A10G154500 Gossypium hirsutum HOM05D005041 ORTHO05D006003 4.5e-182 641.3 379 79.7
Sed0005186 Sechium edule HOM05D005041 ORTHO05D006003 1.0e-181 640.2 379 78.1
CsaV3_6G037940 Cucumis sativus L. HOM05D005041 ORTHO05D006003 2.5e-180 635.6 381 77.4
Manes.02G087100 Manihot esculenta HOM05D005041 ORTHO05D006003 2.8e-179 632.1 379 76.0
Ah.01g004760 Amaranthus hybridus HOM05D005041 ORTHO05D006003 6.1e-179 630.9 379 76.8
PGR142G0148 Punica granatum HOM05D005041 ORTHO05D006003 1.0e-178 630.2 376 76.9
PSO541G3312 Papaver somniferum HOM05D005041 ORTHO05D006003 5.2e-178 627.9 375 75.7
MSTRG.15060 Avicennia marina HOM05D005041 ORTHO05D006003 2.0e-177 625.9 378 77.0
EL10Ac9g21025 Beta vulgaris HOM05D005041 ORTHO05D006003 3.4e-177 625.2 383 75.7
Lsat_1_v5_gn_4_52360 Lactuca sativa HOM05D005041 ORTHO05D006003 2.2e-176 622.5 383 76.8
Cc05_g09060 Coffea canephora HOM05D005041 ORTHO05D006003 3.7e-176 621.7 380 76.1
PSO675G8631 Papaver somniferum HOM05D005041 ORTHO05D006003 3.7e-176 621.7 375 74.9
Peaxi162Scf00828g00019 Petunia axillaris HOM05D005041 ORTHO05D006003 1.4e-175 619.8 379 75.2
Solyc05g006470.4 Solanum lycopersicum HOM05D005041 ORTHO05D006003 5.4e-175 617.8 380 74.7
ECA234G0116 Erigeron canadensis HOM05D005041 ORTHO05D006003 1.2e-174 616.7 381 73.2
Migut.D00514 Erythranthe guttata HOM05D005041 ORTHO05D006003 5.9e-174 614.4 383 76.0
Lalb_Chr20g0114161 Lupinus albus HOM05D005041 ORTHO05D006003 2.3e-173 612.5 376 75.5
MD09G1156800 Malus domestica HOM05D005041 ORTHO05D006003 6.6e-173 610.9 388 74.0
Os02g0817200 Oryza sativa ssp. japonica HOM05D005041 ORTHO05D006003 8.6e-173 610.5 374 73.8
Aqoxy1G01950 Aquilegia oxysepala HOM05D005041 ORTHO05D006003 7.3e-172 607.4 373 75.6
MBI06_g08528_MAGBIO Magnolia biondii HOM05D005041 ORTHO05D006003 7.3e-172 607.4 380 75.0
Manes.01G129200 Manihot esculenta HOM05D005041 ORTHO05D006003 1.6e-171 606.3 378 74.9
BcaB01g04071 Brassica carinata HOM05D005041 ORTHO05D006003 2.8e-171 605.5 370 74.1
C03p20380 Brassica napus HOM05D005041 ORTHO05D006003 4.7e-171 604.7 370 73.8
BolC3t14416H Brassica oleracea HOM05D005041 ORTHO05D006003 4.7e-171 604.7 370 73.8
HanXRQChr16g0518211 Helianthus annuus HOM05D005041 ORTHO05D006003 1.4e-170 603.2 382 73.6
Nitab4.5_0004310g0020 Nicotiana tabacum HOM05D005041 ORTHO05D006003 1.4e-170 603.2 418 68.7
A03p17270 Brassica napus HOM05D005041 ORTHO05D006003 2.3e-170 602.4 370 73.8
BraA03t11001Z Brassica rapa HOM05D005041 ORTHO05D006003 2.3e-170 602.4 370 73.8
vmacro12428 Vaccinium macrocarpon HOM05D005041 ORTHO05D006003 5.2e-170 601.3 384 75.0
Sp4g13380 Schrenkiella parvula HOM05D005041 ORTHO05D006003 6.8e-170 600.9 370 73.8
ClCG09G022250 Citrullus lanatus HOM05D005041 ORTHO05D006003 1.3e-168 596.7 386 73.1
SGA_v2.0_scaffold8G04656 Striga asiatica HOM05D005041 ORTHO05D006003 6.4e-168 594.3 379 72.8
BcaB02g10347 Brassica carinata HOM05D005041 ORTHO05D006003 8.3e-168 594.0 370 73.0
Carub.0004s1211 Capsella rubella HOM05D005041 ORTHO05D006003 8.3e-168 594.0 372 74.5
BcaC02g11169 Brassica carinata HOM05D005041 ORTHO05D006003 1.1e-167 593.6 370 73.0
C04p19760 Brassica napus HOM05D005041 ORTHO05D006003 1.1e-167 593.6 370 73.0
BolC4t23509H Brassica oleracea HOM05D005041 ORTHO05D006003 1.1e-167 593.6 370 73.0
A05p14760 Brassica napus HOM05D005041 ORTHO05D006003 1.8e-167 592.8 370 73.2
Zm00001eb258930 Zea mays HOM05D005041 ORTHO05D006003 5.4e-167 591.3 374 71.1
SGA_v2.0_scaffold1G00710 Striga asiatica HOM05D005041 ORTHO05D006003 9.2e-167 590.5 379 72.0
AL4G25850 Arabidopsis lyrata HOM05D005041 ORTHO05D006003 4.6e-166 588.2 372 73.7
AL283U10030 Arabidopsis lyrata HOM05D005041 ORTHO05D006003 1.7e-165 586.3 372 73.4
AT2G30910 Arabidopsis thaliana HOM05D005041 ORTHO05D006003 1.7e-165 586.3 372 73.9
TAR626G0242 Trochodendron aralioides HOM05D005041 ORTHO05D006003 1.7e-165 586.3 379 72.3
Sed0006581 Sechium edule HOM05D005041 ORTHO05D006003 2.3e-165 585.9 341 79.5
BraA05t20405Z Brassica rapa HOM05D005041 ORTHO05D006003 8.6e-165 583.9 372 72.6
FAN14G1924 Fragaria x ananassa HOM05D000054 ORTHO05D006003 8.6e-165 583.9 356 76.7
TPR.G13543 Trifolium pratense HOM05D005041 ORTHO05D006003 2.1e-163 579.3 394 70.1
CiPaw.04G135200 Carya illinoinensis HOM05D005041 ORTHO05D006003 1.1e-162 577.0 379 72.3
CDE10G0970 Ceratophyllum demersum HOM05D005041 ORTHO05D006003 2.3e-162 575.9 369 73.2
Dinv06276 Davidia involucrata HOM05D005041 ORTHO05D006003 8.9e-162 573.9 327 82.0
Cfa022568 Carpinus fangiana HOM05D005041 ORTHO05D006003 7.5e-161 570.9 380 71.6
FAN02G2360 Fragaria x ananassa HOM05D000054 ORTHO05D006003 2.4e-159 565.8 383 70.8
Aa31LG5G6010 Aethionema arabicum HOM05D005041 ORTHO05D006003 4.1e-159 565.1 410 65.6
Glyma.10G216300 Glycine max HOM05D005041 ORTHO05D006003 5.4e-159 564.7 339 76.4
AT2G31300 Arabidopsis thaliana HOM05D005041 ORTHO05D006003 6.0e-158 561.2 361 73.4
unitig_37.g12857 Utricularia gibba HOM05D005041 ORTHO05D006003 7.8e-158 560.8 370 70.5
Haze_13460 Corylus avellana HOM05D005041 ORTHO05D006003 5.6e-156 554.7 388 69.1
CDE10G1309 Ceratophyllum demersum HOM05D005041 ORTHO05D006003 4.7e-155 551.6 369 71.8
RcHm_v2.0_Chr2g0150441 Rosa chinensis HOM05D005041 ORTHO05D006003 2.0e-153 546.2 379 68.9
QL08p043305 Quercus lobata HOM05D005041 ORTHO05D006003 2.6e-153 545.8 378 69.6
A04p23600 Brassica napus HOM05D005041 ORTHO05D006003 7.5e-153 544.3 381 67.5
Prupe.3G170000 Prunus persica HOM05D005041 ORTHO05D006003 1.3e-152 543.5 379 68.9
VMungo0540G2345 Vigna mungo HOM05D005041 ORTHO05D006003 1.3e-152 543.5 335 74.9
FAN09G1464 Fragaria x ananassa HOM05D000054 ORTHO05D006003 1.1e-151 540.4 374 68.7
Hund00824 Selenicereus undatus HOM05D005041 ORTHO05D006003 3.2e-151 538.9 377 67.4
Lju124A34T49 Lonicera japonica HOM05D005041 ORTHO05D006003 1.6e-150 536.6 281 87.2
MD17G1143300 Malus domestica HOM05D005041 ORTHO05D006003 2.7e-150 535.8 379 67.5
HPP92_025809 Vanilla planifolia HOM05D005041 ORTHO05D006003 4.6e-150 535.0 370 67.8
Potri.014G141700 Populus trichocarpa HOM05D005041 ORTHO05D006003 1.0e-149 533.9 379 68.1
Lj2A374G38 Lonicera japonica HOM05D005041 ORTHO05D006003 1.3e-149 533.5 357 73.4
THA.LOC104826236 Tarenaya hassleriana HOM05D005041 ORTHO05D006003 3.0e-149 532.3 372 66.9
CANSAT11G1484 Cannabis sativa HOM05D005041 ORTHO05D006003 8.6e-149 530.8 380 67.9
Thhalv10017625m.g Eutrema salsugineum HOM05D005041 ORTHO05D006003 8.6e-149 530.8 318 76.7
BcaB06g28392 Brassica carinata HOM05D005041 ORTHO05D006003 1.1e-146 523.9 335 72.2
C04p60050 Brassica napus HOM05D005041 ORTHO05D006003 1.8e-146 523.1 356 69.4
Medtr3g049070 Medicago truncatula HOM05D005041 ORTHO05D006003 5.8e-145 518.1 376 65.4
Glyma.18G103800 Glycine max HOM05D005041 ORTHO05D006003 9.9e-145 517.3 376 65.4
BolC4t27508H Brassica oleracea HOM05D005041 ORTHO05D006003 4.9e-144 515.0 366 67.2
Lj6g0019726 Lotus japonicus HOM05D005041 ORTHO05D006003 4.9e-144 515.0 376 66.0
Nitab4.5_0002312g0010 Nicotiana tabacum HOM05D005041 ORTHO05D006003 4.9e-144 515.0 379 65.2
Ca_14633_v3 Cicer arietinum L. HOM05D005041 ORTHO05D006003 2.4e-143 512.7 376 64.9
Glyma.08G311700 Glycine max HOM05D005041 ORTHO05D006003 3.2e-143 512.3 376 64.6
BraA04t17886Z Brassica rapa HOM05D005041 ORTHO05D006003 9.2e-143 510.8 363 66.9
Phvul.005G127400 Phaseolus vulgaris HOM05D005041 ORTHO05D006003 2.1e-142 509.6 376 64.4
Psat5g186840 Pisum sativum HOM05D005041 ORTHO05D006003 2.7e-142 509.2 376 64.4
VMungo1080G0034 Vigna mungo HOM05D005041 ORTHO05D006003 3.6e-139 498.8 376 62.8
Sc12g0003800 Simmondsia chinensis HOM05D005041 ORTHO05D006003 8.1e-139 497.7 379 64.1
SMO364G0091 Selaginella moellendorffii HOM05D005041 ORTHO05D006003 1.8e-138 496.5 377 62.1
arahy.Tifrunner.gnm1.ann1.5LHA9P Arachis hypogaea HOM05D005041 ORTHO05D006003 9.9e-137 490.7 378 63.0
arahy.Tifrunner.gnm1.ann1.RC242R Arachis hypogaea HOM05D005041 ORTHO05D006003 9.9e-137 490.7 378 63.0
Phvul.006G036500 Phaseolus vulgaris HOM05D005041 ORTHO05D006003 5.6e-132 474.9 378 61.4
Cpa.g.sc50.61 Carica papaya HOM05D005041 ORTHO05D006003 1.8e-130 469.9 253 83.4
Duzib187G1062 Durio zibethinus HOM05D005041 ORTHO05D006003 2.2e-128 463.0 379 62.3
AagrBONN_evm.TU.Sc2ySwM_228.2899 Anthoceros agrestis HOM05D005041 ORTHO05D006003 2.4e-127 459.5 365 59.7
Sopen05g002420 Solanum pennellii HOM05D005041 ORTHO05D006003 3.2e-127 459.1 257 80.9
Mapoly0116s0052 Marchantia polymorpha HOM05D005041 ORTHO05D006003 5.1e-125 451.8 386 53.6
Zm00001eb191400 Zea mays HOM05D005041 ORTHO05D006003 1.5e-121 440.3 253 77.5
Mapoly0090s0056 Marchantia polymorpha HOM05D005041 ORTHO05D006003 7.6e-121 438.0 386 52.6
Pp3c19_12930 Physcomitrium patens HOM05D005041 ORTHO05D006003 3.8e-120 435.6 377 54.6
FvH4_6g37551 Fragaria vesca HOM05D005041 ORTHO05D006003 7.9e-118 427.9 281 71.5
Pp3c18_4810 Physcomitrium patens HOM05D005041 ORTHO05D006003 5.6e-116 421.8 381 52.5
ATR0787G051 Amborella trichopoda HOM05D005041 ORTHO05D006003 5.7e-108 395.2 224 79.9
AUR62031794 Chenopodium quinoa HOM05D005041 ORTHO05D006003 5.7e-108 395.2 309 62.8
Thhalv10017010m.g Eutrema salsugineum HOM05D005041 ORTHO05D006003 2.2e-104 383.3 373 53.6
AUR62024003 Chenopodium quinoa HOM05D005041 ORTHO05D006003 2.3e-93 346.7 309 56.0
CBR_g18699 Chara braunii HOM05D005041 ORTHO05D006003 8.5e-80 301.6 533 35.3
Nn6g34435 Nelumbo nucifera HOM05D005041 ORTHO05D006003 4.0e-77 292.7 219 65.8
SalBow4G0308 Salvia bowleyana HOM05D005041 ORTHO05D006003 2.7e-73 280.0 214 65.4
Sabra14G0106900 Salix brachista HOM05D005041 ORTHO05D006003 5.5e-71 272.3 220 62.7
CARHR124910 Cardamine hirsuta HOM05D005041 ORTHO05D006003 4.0e-69 266.2 146 82.2
Sopen05g002410 Solanum pennellii HOM05D005041 ORTHO05D006003 5.2e-69 265.8 271 50.9
CARHR124390 Cardamine hirsuta HOM05D005041 ORTHO05D006003 8.8e-69 265.0 143 83.2
Cfa026893 Carpinus fangiana HOM05D005041 ORTHO05D006003 4.8e-67 259.2 366 39.1
Actinidia12824 Actinidia chinensis HOM05D005041 ORTHO05D006003 8.9e-61 238.4 153 72.5
SHI23137 Sapria himalayana HOM05D005041 ORTHO05D006003 1.7e-56 224.2 134 75.4
Oeu032123.1 Olea europaea HOM05D005041 ORTHO05D006003 5.0e-56 222.6 146 69.9
SEGI_31471 Sequoiadendron giganteum HOM05D005041 ORTHO05D006003 9.8e-44 181.8 153 54.2
TAR383G0169 Trochodendron aralioides HOM05D005041 ORTHO05D006003 1.9e-42 177.6 108 70.4
Cre16.g648100 Chlamydomonas reinhardtii HOM05D005041 ORTHO05D006003 1.2e-38 164.9 262 33.6
SEGI_36522 Sequoiadendron giganteum HOM05D005041 ORTHO05D006003 1.0e-32 145.2 92 66.3
Haze_27289 Corylus avellana HOM05D005041 ORTHO05D006003 2.8e-30 137.1 278 30.2
Duzib147G0812 Durio zibethinus HOM05D005041 ORTHO05D006003 9.9e-28 128.6 147 51.0
BolC2t10705H Brassica oleracea HOM05D005041 ORTHO05D006003 6.2e-22 109.4 58 77.6
Duzib147G0224 Durio zibethinus HOM05D005041 ORTHO05D006003 7.6e-20 102.4 59 76.3
SEGI_23574 Sequoiadendron giganteum HOM05D005041 ORTHO05D006003 3.2e-18 97.1 73 60.3
Lsat_1_v5_gn_9_20280 Lactuca sativa HOM05D005041 ORTHO05D002973 3.6e-14 83.6 74 55.4
CARHR285180 Cardamine hirsuta HOM05D005041 ORTHO05D006003 4.8e-14 83.2 52 63.5
AUR62031783 Chenopodium quinoa HOM05D004756 ORTHO05D005793 2.0e-12 77.8 48 72.9
CARHR059870 Cardamine hirsuta HOM05D005041 ORTHO05D006003 7.6e-12 75.9 57 63.2
Glyma.02G162651 Glycine max HOM05D005041 ORTHO05D006003 4.6e-09 66.6 40 70.0
Medtr7g034625 Medicago truncatula HOM05D000526 ORTHO05D000956 2.8e-06 57.4 184 26.1
arahy.Tifrunner.gnm1.ann1.52GVK1 Arachis hypogaea HOM05D000526 ORTHO05D000956 8.1e-06 55.8 184 23.4
Medtr7g106870 Medicago truncatula HOM05D000526 ORTHO05D000956 8.1e-06 55.8 179 23.5
Phvul.001G198300 Phaseolus vulgaris HOM05D000526 ORTHO05D000956 8.1e-06 55.8 184 23.4


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