Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_013044 Daucus carota HOM05D004419 ORTHO05D005480 3.5e-132 474.9 236 100.0
DCAR_010505 Daucus carota HOM05D004419 ORTHO05D013449 3.5e-15 86.3 46 80.4
DCAR_007794 Daucus carota HOM05D004419 ORTHO05D013449 2.3e-11 73.6 72 54.2
Manes.06G168600 Manihot esculenta HOM05D004419 ORTHO05D005480 3.2e-08 63.2 30 86.7
Hund22076 Selenicereus undatus HOM05D004419 ORTHO05D005480 3.2e-08 63.2 33 81.8
Actinidia39384 Actinidia chinensis HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
Aqoxy2G00106 Aquilegia oxysepala HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
arahy.Tifrunner.gnm1.ann1.6DX332 Arachis hypogaea HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
arahy.Tifrunner.gnm1.ann1.LD2WL8 Arachis hypogaea HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
BcaC05g28277 Brassica carinata HOM05D004419 ORTHO05D005480 4.1e-08 62.8 47 61.7
BraA05t21680Z Brassica rapa HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
CSS0021936 Camellia sinensis var. sinensis HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
Cfa009704 Carpinus fangiana HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
CiPaw.13G165000 Carya illinoinensis HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
AUR62019254 Chenopodium quinoa HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
AUR62043680 Chenopodium quinoa HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
Ca_20582_v3 Cicer arietinum L. HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
Ciclev10015488m.g Citrus clementina HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
Haze_23052 Corylus avellana HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
Haze_23057 Corylus avellana HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
Dinv36300 Davidia involucrata HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
Duzib150G1622 Durio zibethinus HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
Duzib168G0032 Durio zibethinus HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
Glyma.11G130600 Glycine max HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
Glyma.12G055000 Glycine max HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
Gohir.A06G108900 Gossypium hirsutum HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
Gohir.D06G112900 Gossypium hirsutum HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
Gorai.010G128800 Gossypium raimondii HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
Hma1.2p1_0143F.1_g064490 Hydrangea macrophylla HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
Lj3g0003248 Lotus japonicus HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
Lalb_Chr01g0003291 Lupinus albus HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
Lalb_Chr19g0138231 Lupinus albus HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
Medtr4g066020 Medicago truncatula HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
Nn7g36075 Nelumbo nucifera HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
PSO384G0662 Papaver somniferum HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
Phvul.011G056900 Phaseolus vulgaris HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
Potri.001G016200 Populus trichocarpa HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
THA.LOC104816908 Tarenaya hassleriana HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
TPR.G13661 Trifolium pratense HOM05D004419 ORTHO05D005633 4.1e-08 62.8 30 86.7
VMungo1127G0574 Vigna mungo HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
GSVIVG01025322001 Vitis vinifera HOM05D004419 ORTHO05D005480 4.1e-08 62.8 30 86.7
Cpa.g.sc84.102 Carica papaya HOM05D004419 ORTHO05D005480 5.4e-08 62.4 30 86.7
DCAR_013022 Daucus carota HOM05D000400 ORTHO05D001199 5.4e-08 62.4 42 76.2
MD03G1020700 Malus domestica HOM05D004419 ORTHO05D005480 5.4e-08 62.4 30 83.3
Psat7g213880 Pisum sativum HOM05D004419 ORTHO05D005480 5.4e-08 62.4 30 83.3
QL01p006124 Quercus lobata HOM05D004419 ORTHO05D005480 5.4e-08 62.4 30 86.7
Thecc.09G224700 Theobroma cacao HOM05D004419 ORTHO05D005480 5.4e-08 62.4 30 83.3
CAN.G388.54 Capsicum annuum HOM05D004419 ORTHO05D005480 7.1e-08 62.0 30 83.3
AUR62000082 Chenopodium quinoa HOM05D004419 ORTHO05D005480 7.1e-08 62.0 30 83.3
Cc01_g04260 Coffea canephora HOM05D004419 ORTHO05D005480 7.1e-08 62.0 30 83.3
Lj2C654G2 Lonicera japonica HOM05D004419 ORTHO05D005480 7.1e-08 62.0 30 83.3
Nitab4.5_0003250g0020 Nicotiana tabacum HOM05D004419 ORTHO05D005480 7.1e-08 62.0 30 83.3
Sopen01g002670 Solanum pennellii HOM05D004419 ORTHO05D005480 7.1e-08 62.0 30 83.3
PGR119G1205 Punica granatum HOM05D004419 ORTHO05D005480 9.2e-08 61.6 32 78.1
Rhsim01G0189600 Rhododendron simsii HOM05D004419 ORTHO05D005480 9.2e-08 61.6 30 83.3
SHI30509 Sapria himalayana HOM05D004419 ORTHO05D005480 9.2e-08 61.6 30 83.3
Sed0001509 Sechium edule HOM05D004419 ORTHO05D005480 9.2e-08 61.6 30 83.3
TAR623G0092 Trochodendron aralioides HOM05D004419 ORTHO05D005480 9.2e-08 61.6 30 83.3
Ah.04g161770 Amaranthus hybridus HOM05D004419 ORTHO05D005480 1.2e-07 61.2 30 83.3
AT3G20810 Arabidopsis thaliana HOM05D004419 ORTHO05D005480 1.2e-07 61.2 30 83.3
MSTRG.21407 Avicennia marina HOM05D004419 ORTHO05D005480 1.2e-07 61.2 30 83.3
BcaB06g26154 Brassica carinata HOM05D004419 ORTHO05D005480 1.2e-07 61.2 30 83.3
BcaC05g28278 Brassica carinata HOM05D004419 ORTHO05D005480 1.2e-07 61.2 30 83.3
CANSAT54G1224 Cannabis sativa HOM05D004419 ORTHO05D005480 1.2e-07 61.2 30 80.0
Carub.0003s2077 Capsella rubella HOM05D004419 ORTHO05D005480 1.2e-07 61.2 30 83.3
ECA233G0260 Erigeron canadensis HOM05D004419 ORTHO05D005480 1.2e-07 61.2 30 80.0
HanXRQChr02g0056491 Helianthus annuus HOM05D004419 ORTHO05D005480 1.2e-07 61.2 30 80.0
HanXRQChr13g0403921 Helianthus annuus HOM05D004419 ORTHO05D005480 1.2e-07 61.2 30 80.0
Lsat_1_v5_gn_6_50061 Lactuca sativa HOM05D004419 ORTHO05D005480 1.2e-07 61.2 30 80.0
Prupe.6G015700 Prunus persica HOM05D004419 ORTHO05D005480 1.2e-07 61.2 30 80.0
Ah.06g193530 Amaranthus hybridus HOM05D004419 ORTHO05D005480 1.6e-07 60.8 30 83.3
MELO3C015209.2 Cucumis melo HOM05D004419 ORTHO05D005480 1.6e-07 60.8 30 83.3
CsaV3_1G042600 Cucumis sativus L. HOM05D004419 ORTHO05D005480 1.6e-07 60.8 30 83.3
Eucgr.J00814 Eucalyptus grandis HOM05D004419 ORTHO05D005480 1.6e-07 60.8 30 83.3
RcHm_v2.0_Chr5g0078291 Rosa chinensis HOM05D004419 ORTHO05D005480 1.6e-07 60.8 30 80.0
vmacro12711 Vaccinium macrocarpon HOM05D004419 ORTHO05D005480 1.6e-07 60.8 30 83.3
EL10Ac4g10313 Beta vulgaris HOM05D004419 ORTHO05D005480 2.1e-07 60.5 30 86.7
SEGI_06744 Sequoiadendron giganteum HOM05D004419 ORTHO05D005480 2.1e-07 60.5 45 62.2
SGA_v2.0_scaffold1G00802 Striga asiatica HOM05D004419 ORTHO05D005480 2.1e-07 60.5 30 80.0
Aa31LG8G7630 Aethionema arabicum HOM05D004419 ORTHO05D005480 2.7e-07 60.1 30 83.3
BcaC05g28276 Brassica carinata HOM05D004419 ORTHO05D005480 2.7e-07 60.1 30 80.0
A05p27970 Brassica napus HOM05D004419 ORTHO05D005480 2.7e-07 60.1 30 80.0
C05p43260 Brassica napus HOM05D004419 ORTHO05D005480 2.7e-07 60.1 30 80.0
BolC5t33056H Brassica oleracea HOM05D004419 ORTHO05D005480 2.7e-07 60.1 30 80.0
Migut.D00562 Erythranthe guttata HOM05D004419 ORTHO05D005480 2.7e-07 60.1 30 80.0
Manes.14G013900 Manihot esculenta HOM05D004419 ORTHO05D005480 2.7e-07 60.1 30 83.3
Atru.chr3.2519_Atru.chr3.2520 Acer truncatum HOM05D004419 ORTHO05D005480 3.5e-07 59.7 30 83.3
QL01p016023 Quercus lobata HOM05D004419 ORTHO05D005480 3.5e-07 59.7 31 77.4
RcHm_v2.0_Chr5g0078171 Rosa chinensis HOM05D004419 ORTHO05D005480 3.5e-07 59.7 30 76.7
SMO364G0845 Selaginella moellendorffii HOM05D004419 ORTHO05D005480 3.5e-07 59.7 30 80.0
AL3G34730 Arabidopsis lyrata HOM05D004419 ORTHO05D005480 4.6e-07 59.3 29 82.8
CARHR096660 Cardamine hirsuta HOM05D004419 ORTHO05D005480 4.6e-07 59.3 29 82.8
Thhalv10021129m.g Eutrema salsugineum HOM05D004419 ORTHO05D005480 4.6e-07 59.3 29 82.8
FvH4_3g43600 Fragaria vesca HOM05D004419 ORTHO05D005480 4.6e-07 59.3 30 76.7
FAN11G1953 Fragaria x ananassa HOM05D004419 ORTHO05D005480 4.6e-07 59.3 30 76.7
FAN16G1269 Fragaria x ananassa HOM05D004419 ORTHO05D005480 4.6e-07 59.3 30 76.7
FAN21G0217 Fragaria x ananassa HOM05D004419 ORTHO05D005480 4.6e-07 59.3 30 76.7
FAN25G0488 Fragaria x ananassa HOM05D004419 ORTHO05D005480 6.0e-07 58.9 66 50.0
Oeu024454.3 Olea europaea HOM05D004419 ORTHO05D005480 6.0e-07 58.9 30 80.0
Os09g0489200 Oryza sativa ssp. japonica HOM05D004419 ORTHO05D005480 6.0e-07 58.9 30 80.0
Sp3g18830 Schrenkiella parvula HOM05D004419 ORTHO05D005480 6.0e-07 58.9 30 80.0
PGSC0003DMG400021346 Solanum tuberosum HOM05D004419 ORTHO05D005480 6.0e-07 58.9 30 80.0
TWI60G0085 Tripterygium wilfordii HOM05D004419 ORTHO05D005480 6.0e-07 58.9 30 76.7
MBI01_g05106_MAGBIO Magnolia biondii HOM05D004419 ORTHO05D005480 7.8e-07 58.5 30 73.3
ATR0605G084 Amborella trichopoda HOM05D004419 ORTHO05D005480 1.0e-06 58.2 30 73.3
HPP92_017970 Vanilla planifolia HOM05D004419 ORTHO05D005480 1.0e-06 58.2 30 76.7
Sc16g0011690 Simmondsia chinensis HOM05D004419 ORTHO05D005480 1.3e-06 57.8 36 69.4
Solyc01g006680.4 Solanum lycopersicum HOM05D004419 ORTHO05D005480 1.3e-06 57.8 26 88.5
Pp3c17_10850 Physcomitrium patens HOM05D004419 ORTHO05D005480 1.7e-06 57.4 30 73.3
MELO3C025411.2 Cucumis melo HOM05D004419 ORTHO05D005480 2.3e-06 57.0 28 82.1
RcHm_v2.0_Chr5g0078191 Rosa chinensis HOM05D004419 ORTHO05D005480 3.9e-06 56.2 36 66.7
Mapoly0036s0149 Marchantia polymorpha HOM05D004419 ORTHO05D005480 6.6e-06 55.5 30 66.7


User provided reference genes

Program Settings