Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010215 Daucus carota HOM05D004464 ORTHO05D005135 2.1e-91 339.3 219 100.0
DCAR_016093 Daucus carota HOM05D004464 ORTHO05D005135 1.2e-89 333.6 219 79.9
Dinv34904 Davidia involucrata HOM05D004464 ORTHO05D005135 5.6e-76 288.1 219 68.9
Dinv33871 Davidia involucrata HOM05D004464 ORTHO05D005135 7.4e-76 287.7 219 68.5
Eucgr.J01412 Eucalyptus grandis HOM05D004464 ORTHO05D005135 1.3e-75 287.0 218 68.3
MSTRG.15432 Avicennia marina HOM05D004464 ORTHO05D005135 4.8e-75 285.0 219 68.5
Ciclev10012892m.g Citrus clementina HOM05D004464 ORTHO05D005135 4.8e-75 285.0 219 68.0
Duzib150G0689 Durio zibethinus HOM05D004464 ORTHO05D005135 6.2e-75 284.6 219 68.5
Hma1.2p1_1837F.1_g304810 Hydrangea macrophylla HOM05D004464 ORTHO05D005135 6.2e-75 284.6 219 68.0
Gohir.D05G003500 Gossypium hirsutum HOM05D004464 ORTHO05D005135 1.1e-74 283.9 219 67.6
Gorai.009G003100 Gossypium raimondii HOM05D004464 ORTHO05D005135 1.1e-74 283.9 219 67.6
Sabra17G0087000 Salix brachista HOM05D004464 ORTHO05D005135 1.1e-74 283.9 219 67.6
Prupe.3G248300 Prunus persica HOM05D004464 ORTHO05D005135 1.4e-74 283.5 219 68.0
Atru.chr12.814 Acer truncatum HOM05D004464 ORTHO05D005135 1.8e-74 283.1 219 66.7
Migut.K00882 Erythranthe guttata HOM05D004464 ORTHO05D005135 1.8e-74 283.1 217 67.7
PGR042G1328 Punica granatum HOM05D004464 ORTHO05D005135 1.8e-74 283.1 219 67.6
Actinidia26272 Actinidia chinensis HOM05D004464 ORTHO05D005135 2.4e-74 282.7 219 67.6
Gohir.A05G003100 Gossypium hirsutum HOM05D004464 ORTHO05D005135 2.4e-74 282.7 219 67.6
SGA_v2.0_scaffold148G36455 Striga asiatica HOM05D004464 ORTHO05D005135 2.4e-74 282.7 219 67.1
TAR371G0146 Trochodendron aralioides HOM05D004464 ORTHO05D005135 2.4e-74 282.7 219 65.8
GSVIVG01036537001 Vitis vinifera HOM05D004464 ORTHO05D005135 2.4e-74 282.7 219 66.7
Potri.017G101200 Populus trichocarpa HOM05D004464 ORTHO05D005135 4.0e-74 282.0 219 67.1
Sopen02g034060 Solanum pennellii HOM05D004464 ORTHO05D005135 4.0e-74 282.0 219 67.1
HanXRQChr15g0490131 Helianthus annuus HOM05D004464 ORTHO05D005135 5.3e-74 281.6 217 66.8
Solyc02g089280.3 Solanum lycopersicum HOM05D004464 ORTHO05D005135 6.9e-74 281.2 219 67.1
Actinidia17608 Actinidia chinensis HOM05D004464 ORTHO05D005135 9.0e-74 280.8 219 67.1
Nn4g23543 Nelumbo nucifera HOM05D004464 ORTHO05D005135 9.0e-74 280.8 219 67.1
COL.COLO4_21291 Corchorus olitorius HOM05D004464 ORTHO05D005135 1.2e-73 280.4 219 66.7
Potri.004G113600 Populus trichocarpa HOM05D004464 ORTHO05D005135 1.2e-73 280.4 219 67.1
Thecc.01G298100 Theobroma cacao HOM05D004464 ORTHO05D005135 1.2e-73 280.4 219 67.1
Manes.01G100100 Manihot esculenta HOM05D004464 ORTHO05D005135 1.5e-73 280.0 219 66.7
PGSC0003DMG400001469 Solanum tuberosum HOM05D004464 ORTHO05D005135 2.6e-73 279.3 219 66.2
SalBow1G0807 Salvia bowleyana HOM05D004464 ORTHO05D005135 4.5e-73 278.5 219 66.2
MBI15_g04989_MAGBIO Magnolia biondii HOM05D004464 ORTHO05D005135 7.6e-73 277.7 219 66.2
MBI15_g11301_MAGBIO Magnolia biondii HOM05D004464 ORTHO05D005135 7.6e-73 277.7 219 66.2
CANSAT11G0238 Cannabis sativa HOM05D004464 ORTHO05D005135 1.3e-72 276.9 219 64.8
Sabra10G0012000 Salix brachista HOM05D004464 ORTHO05D005135 1.3e-72 276.9 226 65.5
Nitab4.5_0001339g0030 Nicotiana tabacum HOM05D004464 ORTHO05D005135 1.7e-72 276.6 219 65.8
TWI36G0525 Tripterygium wilfordii HOM05D004464 ORTHO05D005135 1.7e-72 276.6 219 66.7
TWI36G0787 Tripterygium wilfordii HOM05D004464 ORTHO05D005135 1.7e-72 276.6 219 66.7
CANSAT64G2552 Cannabis sativa HOM05D004464 ORTHO05D005135 2.2e-72 276.2 219 64.8
Cc07_g04530 Coffea canephora HOM05D004464 ORTHO05D005135 2.2e-72 276.2 219 66.7
Glyma.10G232700 Glycine max HOM05D004464 ORTHO05D005135 2.2e-72 276.2 219 64.4
Glyma.20G161600 Glycine max HOM05D004464 ORTHO05D005135 2.2e-72 276.2 219 64.4
MD09G1075700 Malus domestica HOM05D004464 ORTHO05D005135 2.2e-72 276.2 219 65.3
Phvul.007G072900 Phaseolus vulgaris HOM05D004464 ORTHO05D005135 2.2e-72 276.2 219 64.4
CDE10G0456 Ceratophyllum demersum HOM05D004464 ORTHO05D005135 2.9e-72 275.8 219 65.8
TWI75G1858 Tripterygium wilfordii HOM05D004464 ORTHO05D005135 2.9e-72 275.8 219 66.7
CSS0016516 Camellia sinensis var. sinensis HOM05D004464 ORTHO05D005135 3.8e-72 275.4 219 64.8
CSS0037173 Camellia sinensis var. sinensis HOM05D004464 ORTHO05D005135 4.9e-72 275.0 219 64.4
Lj3g0020854 Lotus japonicus HOM05D004464 ORTHO05D005135 8.4e-72 274.2 219 64.8
Lj4g0017621 Lotus japonicus HOM05D004464 ORTHO05D005135 8.4e-72 274.2 219 64.8
Peaxi162Scf01039g00131 Petunia axillaris HOM05D004464 ORTHO05D005135 1.4e-71 273.5 219 65.3
Hund16239 Selenicereus undatus HOM05D004464 ORTHO05D005135 1.4e-71 273.5 219 64.8
ClCG07G016070 Citrullus lanatus HOM05D004464 ORTHO05D005135 1.9e-71 273.1 218 62.8
MD17G1066400 Malus domestica HOM05D004464 ORTHO05D005135 2.4e-71 272.7 219 64.4
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 2.4e-71 272.7 219 65.3
CsaV3_4G010040 Cucumis sativus L. HOM05D004464 ORTHO05D005135 4.2e-71 271.9 218 62.4
CDE10G0562 Ceratophyllum demersum HOM05D004464 ORTHO05D005135 1.2e-70 270.4 219 65.3
Psat7g017000 Pisum sativum HOM05D004464 ORTHO05D005135 1.2e-70 270.4 219 63.0
CAN.G497.54 Capsicum annuum HOM05D004464 ORTHO05D005135 2.1e-70 269.6 219 64.8
unitig_0.g1789 Utricularia gibba HOM05D004464 ORTHO05D005135 2.7e-70 269.2 218 64.7
VMungo0720G0545 Vigna mungo HOM05D004464 ORTHO05D005135 2.7e-70 269.2 219 63.9
arahy.Tifrunner.gnm1.ann1.6V5APJ Arachis hypogaea HOM05D004464 ORTHO05D005135 4.6e-70 268.5 219 62.6
arahy.Tifrunner.gnm1.ann1.AQQ1ZC Arachis hypogaea HOM05D004464 ORTHO05D005135 4.6e-70 268.5 219 62.6
ATR0743G033 Amborella trichopoda HOM05D004464 ORTHO05D005135 7.9e-70 267.7 219 63.9
FvH4_6g46310 Fragaria vesca HOM05D004464 ORTHO05D005135 7.9e-70 267.7 219 62.1
FAN02G0274 Fragaria x ananassa HOM05D004464 ORTHO05D005135 7.9e-70 267.7 219 62.1
FAN14G2017 Fragaria x ananassa HOM05D004464 ORTHO05D005135 7.9e-70 267.7 219 62.1
Lalb_Chr16g0389591 Lupinus albus HOM05D004464 ORTHO05D005135 1.0e-69 267.3 219 62.6
RcHm_v2.0_Chr2g0164761 Rosa chinensis HOM05D004464 ORTHO05D005135 1.3e-69 266.9 219 62.1
Ah.16g101000 Amaranthus hybridus HOM05D004464 ORTHO05D005135 1.8e-69 266.5 219 64.4
EL10Ac2g04433 Beta vulgaris HOM05D004464 ORTHO05D005135 3.0e-69 265.8 219 63.0
FAN05G3637 Fragaria x ananassa HOM05D004464 ORTHO05D005135 3.0e-69 265.8 219 61.6
Sed0009719 Sechium edule HOM05D004464 ORTHO05D005135 3.0e-69 265.8 218 60.6
Oeu033412.2 Olea europaea HOM05D004464 ORTHO05D005135 3.9e-69 265.4 228 60.5
Sc07g0002150 Simmondsia chinensis HOM05D004464 ORTHO05D005135 3.9e-69 265.4 217 63.6
FAN09G0031 Fragaria x ananassa HOM05D004464 ORTHO05D005135 5.1e-69 265.0 219 61.6
TPR.G29907 Trifolium pratense HOM05D004464 ORTHO05D005135 1.5e-68 263.5 219 61.2
CiPaw.15G080600 Carya illinoinensis HOM05D004464 ORTHO05D005135 1.9e-68 263.1 220 61.8
AT5G15750 Arabidopsis thaliana HOM05D004464 ORTHO05D005135 2.5e-68 262.7 217 62.2
CiPaw.06G059900 Carya illinoinensis HOM05D004464 ORTHO05D005135 5.6e-68 261.5 220 60.9
BcaNung02202 Brassica carinata HOM05D004464 ORTHO05D005135 7.4e-68 261.2 217 60.8
Ah.10g038200 Amaranthus hybridus HOM05D004464 ORTHO05D005135 9.6e-68 260.8 219 62.6
Medtr8g102530 Medicago truncatula HOM05D004464 ORTHO05D005135 1.3e-67 260.4 219 60.3
BcaC03g18447 Brassica carinata HOM05D004464 ORTHO05D005135 2.8e-67 259.2 217 61.3
C02p07950 Brassica napus HOM05D004464 ORTHO05D005135 2.8e-67 259.2 217 61.3
BolC2t06718H Brassica oleracea HOM05D004464 ORTHO05D005135 2.8e-67 259.2 217 61.3
AUR62023152 Chenopodium quinoa HOM05D004464 ORTHO05D005135 2.8e-67 259.2 219 61.6
QL02p065152 Quercus lobata HOM05D004464 ORTHO05D005135 2.8e-67 259.2 220 61.4
TPR.G23462 Trifolium pratense HOM05D004464 ORTHO05D005135 3.7e-67 258.8 219 60.3
A02p03200 Brassica napus HOM05D004464 ORTHO05D005135 4.8e-67 258.5 217 61.3
BraA02t05291Z Brassica rapa HOM05D004464 ORTHO05D005135 4.8e-67 258.5 217 61.3
THA.LOC104820981 Tarenaya hassleriana HOM05D004464 ORTHO05D005135 6.2e-67 258.1 217 61.3
BcaB01g05028 Brassica carinata HOM05D004464 ORTHO05D005135 8.1e-67 257.7 217 60.4
AUR62009474 Chenopodium quinoa HOM05D004464 ORTHO05D005135 8.1e-67 257.7 219 61.2
Sp6g28370 Schrenkiella parvula HOM05D004464 ORTHO05D005135 1.1e-66 257.3 215 60.9
AL6G26590 Arabidopsis lyrata HOM05D004464 ORTHO05D005135 1.4e-66 256.9 215 61.4
QL09p044371 Quercus lobata HOM05D004464 ORTHO05D005135 1.4e-66 256.9 220 61.8
vmacro18124 Vaccinium macrocarpon HOM05D004464 ORTHO05D005135 1.8e-66 256.5 218 62.8
C03p08530 Brassica napus HOM05D004464 ORTHO05D005135 2.4e-66 256.1 217 59.4
Aa31LG11G13830 Aethionema arabicum HOM05D004464 ORTHO05D005135 4.0e-66 255.4 215 61.4
A03p07340 Brassica napus HOM05D004464 ORTHO05D005135 4.0e-66 255.4 217 59.4
BraA03t10058Z Brassica rapa HOM05D004464 ORTHO05D005135 5.3e-66 255.0 217 59.0
Aa31LG2G910 Aethionema arabicum HOM05D004464 ORTHO05D005135 6.9e-66 254.6 215 60.9
PSO782G4050 Papaver somniferum HOM05D004464 ORTHO05D005135 1.5e-65 253.4 219 62.1
Carub.0004s0609 Capsella rubella HOM05D004464 ORTHO05D005135 2.6e-65 252.7 215 60.5
CARHR197580 Cardamine hirsuta HOM05D004464 ORTHO05D005135 5.8e-65 251.5 215 59.5
PSO198G0095 Papaver somniferum HOM05D004464 ORTHO05D005135 7.6e-65 251.1 219 61.6
Cfa007699 Carpinus fangiana HOM05D004464 ORTHO05D005135 1.7e-64 250.0 220 60.0
Aqoxy3G02935 Aquilegia oxysepala HOM05D004464 ORTHO05D005135 3.8e-64 248.8 219 59.8
Carub.0006s1390 Capsella rubella HOM05D004464 ORTHO05D005135 6.5e-64 248.1 215 60.0
Mapoly0007s0196 Marchantia polymorpha HOM05D004464 ORTHO05D005135 1.4e-63 246.9 219 57.5
PSO017G3712 Papaver somniferum HOM05D004464 ORTHO05D005135 1.4e-63 246.9 219 59.4
MCO12G368 Micromonas commoda HOM05D004464 ORTHO05D005135 2.5e-63 246.1 218 60.1
Duzib170G0747 Durio zibethinus HOM05D004464 ORTHO05D005135 5.1e-61 238.4 219 58.9
ECA285G0012 Erigeron canadensis HOM05D004464 ORTHO05D005135 5.1e-61 238.4 221 57.0
SHI12226 Sapria himalayana HOM05D004464 ORTHO05D005135 2.8e-59 232.6 220 53.6
Pp3c13_7750 Physcomitrium patens HOM05D004464 ORTHO05D005135 3.7e-59 232.3 219 52.5
SMO089G0012 Selaginella moellendorffii HOM05D004464 ORTHO05D005135 3.7e-59 232.3 219 53.9
Nitab4.5_0009887g0020 Nicotiana tabacum HOM05D004464 ORTHO05D005135 4.1e-58 228.8 187 63.6
Ca_17363_v3 Cicer arietinum L. HOM05D002451 ORTHO05D007901 9.0e-58 227.6 191 59.7
Lsat_1_v5_gn_3_96881 Lactuca sativa HOM05D004464 ORTHO05D005135 1.5e-57 226.9 217 56.7
Zm00001eb280020 Zea mays HOM05D004464 ORTHO05D005135 2.2e-56 223.0 217 57.6
Atru.chr5.3325 Acer truncatum HOM05D004464 ORTHO05D005135 5.5e-55 218.4 219 56.2
TAR629G1609 Trochodendron aralioides HOM05D004464 ORTHO05D005135 9.3e-55 217.6 191 59.2
Haze_14377 Corylus avellana HOM05D004464 ORTHO05D005135 2.7e-54 216.1 224 54.5
Glyma.16G058000 Glycine max HOM05D004464 ORTHO05D005135 7.9e-54 214.5 187 60.4
Cre03.g170750 Chlamydomonas reinhardtii HOM05D004464 ORTHO05D005135 1.3e-53 213.8 217 51.6
PSO478G4867 Papaver somniferum HOM05D004464 ORTHO05D005135 7.4e-52 208.0 219 52.5
Thhalv10014794m.g Eutrema salsugineum HOM05D004464 ORTHO05D005135 2.1e-46 189.9 172 57.0
SMO302G0020 Selaginella moellendorffii HOM05D004464 ORTHO05D005135 1.8e-45 186.8 211 48.3
Gorai.007G357000 Gossypium raimondii HOM05D004464 ORTHO05D005135 9.7e-44 181.0 215 49.8
MELO3C000036.2 Cucumis melo HOM05D004464 ORTHO05D005135 1.4e-42 177.2 98 83.7
HPP92_025702 Vanilla planifolia HOM05D004464 ORTHO05D005135 1.8e-42 176.8 191 52.4
SEGI_12415 Sequoiadendron giganteum HOM05D004464 ORTHO05D005135 2.4e-42 176.4 174 52.9
Lju361C7T5 Lonicera japonica HOM05D004464 ORTHO05D005135 1.2e-41 174.1 99 84.8
BcaNung00660 Brassica carinata HOM05D004464 ORTHO05D005135 1.5e-41 173.7 194 46.9
Cpa.g.sc14.239 Carica papaya HOM05D004464 ORTHO05D005135 4.5e-41 172.2 99 82.8
Nn3g17540 Nelumbo nucifera HOM05D004464 ORTHO05D005135 5.9e-41 171.8 219 47.5
Gorai.007G356600 Gossypium raimondii HOM05D004464 ORTHO05D005135 7.7e-41 171.4 99 83.8
Gorai.007G357200 Gossypium raimondii HOM05D004464 ORTHO05D005135 1.0e-40 171.0 99 81.8
Rhsim08G0077600 Rhododendron simsii HOM05D004464 ORTHO05D005135 1.0e-40 171.0 99 80.8
AagrBONN_evm.TU.Sc2ySwM_362.1773 Anthoceros agrestis HOM05D004464 ORTHO05D005135 6.1e-38 161.8 187 46.5
BcaNung00661 Brassica carinata HOM05D004464 ORTHO05D005135 1.1e-34 151.0 194 43.3
Cfa025099 Carpinus fangiana HOM05D002539 ORTHO05D005135 7.7e-33 144.8 217 38.7
ECA246G0747 Erigeron canadensis HOM05D004464 ORTHO05D005135 3.2e-31 139.4 101 66.3
CBR_g26031 Chara braunii HOM05D004464 ORTHO05D005135 1.6e-30 137.1 182 44.0
Lju361A7T16 Lonicera japonica HOM05D004464 ORTHO05D005135 8.0e-30 134.8 78 82.1
Oeu003765.1 Olea europaea HOM05D007961 ORTHO05D005135 8.8e-29 131.3 78 78.2
BolC3t13358H Brassica oleracea HOM05D004464 ORTHO05D005135 4.4e-28 129.0 142 50.0
AagrBONN_evm.TU.Sc2ySwM_344.90 Anthoceros agrestis HOM05D004464 ORTHO05D005135 2.4e-26 123.2 170 42.4
MELO3C001556.2 Cucumis melo HOM05D004464 ORTHO05D005135 7.7e-25 118.2 78 70.5
AagrBONN_evm.TU.Sc2ySwM_368.3154 Anthoceros agrestis HOM05D004464 ORTHO05D005135 1.3e-24 117.5 100 59.0
BolC1t00394H Brassica oleracea HOM05D004464 ORTHO05D005135 2.2e-24 116.7 78 67.9
SHI40216 Sapria himalayana HOM05D004464 ORTHO05D005135 9.8e-20 101.3 73 67.1
MELO3C000032.2 Cucumis melo HOM05D004464 ORTHO05D005135 7.7e-17 91.7 51 82.4
SHI12394 Sapria himalayana HOM05D004464 ORTHO05D005135 4.7e-14 82.4 142 38.0
Thecc.01G298200 Theobroma cacao HOM05D004464 ORTHO05D005135 2.3e-13 80.1 47 78.7
C09p61360 Brassica napus HOM05D004464 ORTHO05D005135 4.7e-06 55.8 157 31.8


User provided reference genes

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