Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009016 Daucus carota HOM05D002594 ORTHO05D003499 1.5e-53 212.6 108 100.0
DCAR_004347 Daucus carota HOM05D002594 ORTHO05D003499 1.4e-16 89.7 108 58.3
Dinv31273 Davidia involucrata HOM05D002594 ORTHO05D003499 1.2e-15 86.7 123 48.0
FvH4_4g07440 Fragaria vesca HOM05D002594 ORTHO05D003499 2.7e-15 85.5 117 53.0
FAN12G4354 Fragaria x ananassa HOM05D002594 ORTHO05D003499 2.7e-15 85.5 117 53.0
Prupe.1G077400 Prunus persica HOM05D002594 ORTHO05D003499 8.0e-15 84.0 115 51.3
FAN22G1544 Fragaria x ananassa HOM05D002594 ORTHO05D003499 3.0e-14 82.0 117 52.1
HanXRQChr17g0538361 Helianthus annuus HOM05D002594 ORTHO05D003499 1.5e-13 79.7 114 49.1
RcHm_v2.0_Chr4g0399901 Rosa chinensis HOM05D002594 ORTHO05D003499 4.4e-13 78.2 116 51.7
ECA233G2844 Erigeron canadensis HOM05D002594 ORTHO05D003499 1.3e-12 76.6 119 47.9
MD13G1244100 Malus domestica HOM05D002594 ORTHO05D003499 8.2e-12 73.9 119 44.5
Nitab4.5_0002208g0020 Nicotiana tabacum HOM05D002594 ORTHO05D003499 1.1e-11 73.6 115 49.6
CAN.G809.36 Capsicum annuum HOM05D002594 ORTHO05D003499 1.4e-11 73.2 121 47.1
Lsat_1_v5_gn_6_65541 Lactuca sativa HOM05D002594 ORTHO05D003499 5.3e-11 71.2 102 47.1
Lj5g0011873 Lotus japonicus HOM05D002594 ORTHO05D003499 5.3e-11 71.2 113 50.4
Lj5g0018790 Lotus japonicus HOM05D002594 ORTHO05D003499 5.3e-11 71.2 113 50.4
Nn7g37178 Nelumbo nucifera HOM05D002594 ORTHO05D003499 7.0e-11 70.9 119 45.4
CiPaw.05G038700 Carya illinoinensis HOM05D002594 ORTHO05D003499 2.6e-10 68.9 121 44.6
Cc09_g04890 Coffea canephora HOM05D002594 ORTHO05D003499 2.6e-10 68.9 119 46.2
ECA247G2788 Erigeron canadensis HOM05D002594 ORTHO05D003499 2.6e-10 68.9 115 44.3
FAN07G2380 Fragaria x ananassa HOM05D002594 ORTHO05D003499 2.6e-10 68.9 121 46.3
FAN17G0285 Fragaria x ananassa HOM05D002594 ORTHO05D003499 2.6e-10 68.9 117 47.0
TPR.G12859 Trifolium pratense HOM05D002594 ORTHO05D003499 5.9e-10 67.8 115 46.1
Lj1A1151T81 Lonicera japonica HOM05D002594 ORTHO05D003499 1.0e-09 67.0 104 51.0
Nitab4.5_0000688g0290 Nicotiana tabacum HOM05D002594 ORTHO05D003499 1.0e-09 67.0 104 51.9
Dinv05869 Davidia involucrata HOM05D002594 ORTHO05D003499 2.2e-09 65.9 83 55.4
Atru.chr4.1090 Acer truncatum HOM05D002594 ORTHO05D003499 3.8e-09 65.1 122 45.1
CAN.G150.2 Capsicum annuum HOM05D002594 ORTHO05D003499 6.5e-09 64.3 118 44.9
Hund24438 Selenicereus undatus HOM05D002594 ORTHO05D003499 6.5e-09 64.3 122 39.3
Actinidia05385 Actinidia chinensis HOM05D002594 ORTHO05D003499 8.5e-09 63.9 123 43.9
Atru.chr12.1112 Acer truncatum HOM05D002594 ORTHO05D003499 1.1e-08 63.5 116 44.8
Aqoxy7G03613 Aquilegia oxysepala HOM05D002594 ORTHO05D003499 1.1e-08 63.5 104 49.0
Lalb_Chr06g0165601 Lupinus albus HOM05D002594 ORTHO05D003499 1.1e-08 63.5 112 45.5
SGA_v2.0_scaffold423G51465 Striga asiatica HOM05D002594 ORTHO05D003499 1.1e-08 63.5 119 42.9
Ciclev10014300m.g Citrus clementina HOM05D002594 ORTHO05D003499 1.5e-08 63.2 129 41.1
Nitab4.5_0002162g0020 Nicotiana tabacum HOM05D002594 ORTHO05D003499 1.5e-08 63.2 133 42.9
vmacro07278 Vaccinium macrocarpon HOM05D002594 ORTHO05D003499 1.5e-08 63.2 108 48.1
Psat7g089360 Pisum sativum HOM05D002594 ORTHO05D003499 4.2e-08 61.6 116 45.7
MSTRG.7590 Avicennia marina HOM05D002594 ORTHO05D003499 1.2e-07 60.1 121 39.7
Lj3g0008201 Lotus japonicus HOM05D002594 ORTHO05D003499 1.6e-07 59.7 115 44.3
Rhsim03G0093900 Rhododendron simsii HOM05D002594 ORTHO05D003499 1.6e-07 59.7 107 48.6
Ah.15g095630 Amaranthus hybridus HOM05D002594 ORTHO05D003499 2.1e-07 59.3 76 55.3
Carub.0001s1441 Capsella rubella HOM05D002594 ORTHO05D003499 2.1e-07 59.3 116 39.7
PGR044G2151 Punica granatum HOM05D002594 ORTHO05D003499 2.1e-07 59.3 117 44.4
CSS0036069 Camellia sinensis var. sinensis HOM05D002594 ORTHO05D003499 3.6e-07 58.5 114 42.1
Ca_23469_v3 Cicer arietinum L. HOM05D002594 ORTHO05D003499 3.6e-07 58.5 52 67.3
ClCG11G007770 Citrullus lanatus HOM05D002594 ORTHO05D003499 4.7e-07 58.2 118 43.2
Glyma.15G173200 Glycine max HOM05D002594 ORTHO05D003499 4.7e-07 58.2 109 45.0
Medtr8g106170 Medicago truncatula HOM05D002594 ORTHO05D003499 4.7e-07 58.2 115 42.6
VMungo0720G1145 Vigna mungo HOM05D002594 ORTHO05D003499 4.7e-07 58.2 113 43.4
AT1G14640 Arabidopsis thaliana HOM05D002594 ORTHO05D003499 6.1e-07 57.8 111 40.5
MSTRG.7588 Avicennia marina HOM05D002594 ORTHO05D003499 8.0e-07 57.4 124 40.3
Glyma.20G126000 Glycine max HOM05D002594 ORTHO05D003499 8.0e-07 57.4 109 42.2
Potri.007G070700 Populus trichocarpa HOM05D002594 ORTHO05D003499 8.0e-07 57.4 114 43.0
Lalb_Chr02g0145431 Lupinus albus HOM05D002594 ORTHO05D003499 1.0e-06 57.0 122 44.3
MD16G1250800 Malus domestica HOM05D002594 ORTHO05D003499 1.0e-06 57.0 75 54.7
COL.COLO4_27671 Corchorus olitorius HOM05D002594 ORTHO05D003499 1.4e-06 56.6 133 39.1
Glyma.10G264400 Glycine max HOM05D002594 ORTHO05D003499 1.4e-06 56.6 109 44.0
Lalb_Chr02g0145401 Lupinus albus HOM05D002594 ORTHO05D003499 1.4e-06 56.6 122 44.3
Lalb_Chr02g0145451 Lupinus albus HOM05D002594 ORTHO05D003499 1.4e-06 56.6 122 44.3
AUR62022810 Chenopodium quinoa HOM05D002594 ORTHO05D003499 1.8e-06 56.2 121 40.5
Glyma.09G007700 Glycine max HOM05D002594 ORTHO05D003499 1.8e-06 56.2 109 43.1
Phvul.007G037600 Phaseolus vulgaris HOM05D002594 ORTHO05D003499 1.8e-06 56.2 101 48.5
Psat7g003760 Pisum sativum HOM05D002594 ORTHO05D003499 1.8e-06 56.2 116 43.1
Potri.005G094600 Populus trichocarpa HOM05D002594 ORTHO05D003499 1.8e-06 56.2 113 40.7
A06p10690 Brassica napus HOM05D002594 ORTHO05D003499 2.3e-06 55.8 65 55.4
BraA06t24251Z Brassica rapa HOM05D002594 ORTHO05D003499 2.3e-06 55.8 65 55.4
MELO3C008151.2 Cucumis melo HOM05D002594 ORTHO05D003499 2.3e-06 55.8 119 41.2
THA.LOC104801765 Tarenaya hassleriana HOM05D002594 ORTHO05D003499 2.3e-06 55.8 108 40.7
CsaV3_2G033800 Cucumis sativus L. HOM05D002594 ORTHO05D003499 3.0e-06 55.5 119 41.2
Eucgr.J00854 Eucalyptus grandis HOM05D002594 ORTHO05D003499 3.0e-06 55.5 117 41.9
CDE02G3426 Ceratophyllum demersum HOM05D002594 ORTHO05D003499 4.0e-06 55.1 51 60.8
AUR62012853 Chenopodium quinoa HOM05D002594 ORTHO05D003499 4.0e-06 55.1 122 40.2
TAR371G1001 Trochodendron aralioides HOM05D002594 ORTHO05D003499 4.0e-06 55.1 52 63.5
unitig_92.g28193 Utricularia gibba HOM05D002594 ORTHO05D003499 4.0e-06 55.1 90 44.4
MBI03_g24017_MAGBIO Magnolia biondii HOM05D002594 ORTHO05D003499 5.2e-06 54.7 128 41.4
TWI74G1222 Tripterygium wilfordii HOM05D002594 ORTHO05D003499 5.2e-06 54.7 122 40.2
BcaB03g13089 Brassica carinata HOM05D002594 ORTHO05D003499 6.7e-06 54.3 113 40.7
SalBow8G2582 Salvia bowleyana HOM05D002594 ORTHO05D003499 6.7e-06 54.3 121 41.3
QL09p022988 Quercus lobata HOM05D002594 ORTHO05D003499 8.8e-06 53.9 100 48.0


User provided reference genes

Program Settings