Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008677 Daucus carota HOM05D003931 ORTHO05D004577 6.8e-184 647.1 314 100.0
QL08p011429 Quercus lobata HOM05D003931 ORTHO05D004577 2.1e-108 396.4 287 66.6
QL08p011634 Quercus lobata HOM05D003931 ORTHO05D004577 2.1e-108 396.4 287 66.6
QL08p011649 Quercus lobata HOM05D003931 ORTHO05D004577 2.1e-108 396.4 287 66.6
FAN16G2486 Fragaria x ananassa HOM05D003931 ORTHO05D004577 1.5e-106 390.2 293 64.5
CiPaw.11G187800 Carya illinoinensis HOM05D003931 ORTHO05D004577 2.0e-106 389.8 308 63.0
Hma1.2p1_1271F.1_g271720 Hydrangea macrophylla HOM05D003931 ORTHO05D004577 2.6e-106 389.4 300 62.0
TWI38G0918 Tripterygium wilfordii HOM05D003931 ORTHO05D004577 5.7e-106 388.3 252 70.6
Manes.15G073200 Manihot esculenta HOM05D003931 ORTHO05D004577 6.3e-105 384.8 314 61.5
FAN11G2983 Fragaria x ananassa HOM05D003931 ORTHO05D004577 4.1e-104 382.1 308 60.7
Oeu042929.1 Olea europaea HOM05D003931 ORTHO05D004577 5.4e-104 381.7 301 60.5
FvH4_3g22400 Fragaria vesca HOM05D003931 ORTHO05D004577 9.1e-104 380.9 308 60.4
FAN21G1679 Fragaria x ananassa HOM05D003931 ORTHO05D004577 1.2e-103 380.6 292 62.7
FAN21G3611 Fragaria x ananassa HOM05D003931 ORTHO05D004577 1.2e-103 380.6 292 62.7
Atru.chr2.3378 Acer truncatum HOM05D003931 ORTHO05D004577 1.6e-103 380.2 291 61.5
ClCG10G005490 Citrullus lanatus HOM05D003931 ORTHO05D004577 2.7e-103 379.4 230 73.5
Lsat_1_v5_gn_5_6120 Lactuca sativa HOM05D003931 ORTHO05D004577 2.7e-103 379.4 229 72.1
Potri.001G424700 Populus trichocarpa HOM05D003931 ORTHO05D004577 3.5e-103 379.0 307 60.9
Cfa020372 Carpinus fangiana HOM05D003931 ORTHO05D004577 1.3e-102 377.1 241 71.4
MD11G1221200 Malus domestica HOM05D003931 ORTHO05D004577 3.8e-102 375.6 301 61.8
RcHm_v2.0_Chr5g0039071 Rosa chinensis HOM05D003931 ORTHO05D004577 3.8e-102 375.6 252 68.3
Prupe.4G210600 Prunus persica HOM05D003931 ORTHO05D004577 5.0e-102 375.2 308 60.1
Dinv40740 Davidia involucrata HOM05D003931 ORTHO05D004577 8.6e-102 374.4 228 73.2
Lsat_1_v5_gn_5_6180 Lactuca sativa HOM05D003931 ORTHO05D004577 1.1e-101 374.0 296 58.4
Sabra16G0288300 Salix brachista HOM05D003931 ORTHO05D004577 2.5e-101 372.9 306 58.5
Haze_09657 Corylus avellana HOM05D003931 ORTHO05D004577 3.3e-101 372.5 232 72.8
MD03G1205300 Malus domestica HOM05D003931 ORTHO05D004577 3.3e-101 372.5 243 72.0
MELO3C025390.2 Cucumis melo HOM05D003931 ORTHO05D004577 4.3e-101 372.1 230 71.7
Migut.M01779 Erythranthe guttata HOM05D003931 ORTHO05D004577 4.3e-101 372.1 301 60.1
Ca_14721_v3 Cicer arietinum L. HOM05D003931 ORTHO05D004577 9.5e-101 370.9 314 59.2
HanXRQChr05g0159031 Helianthus annuus HOM05D003931 ORTHO05D004577 1.6e-100 370.2 263 64.3
vmacro11735 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 2.8e-100 369.4 239 68.2
Nitab4.5_0001604g0100 Nicotiana tabacum HOM05D003931 ORTHO05D004577 3.6e-100 369.0 297 60.3
Sabra11G0123500 Salix brachista HOM05D003931 ORTHO05D004577 1.4e-99 367.1 261 65.1
CsaV3_3G005230 Cucumis sativus L. HOM05D003931 ORTHO05D004577 1.8e-99 366.7 230 70.4
Nn1g03571 Nelumbo nucifera HOM05D003931 ORTHO05D004577 1.8e-99 366.7 230 71.7
Gorai.002G087700 Gossypium raimondii HOM05D003931 ORTHO05D004577 4.0e-99 365.5 294 57.8
CANSAT64G1454 Cannabis sativa HOM05D003931 ORTHO05D004577 5.2e-99 365.2 306 57.2
Actinidia09908 Actinidia chinensis HOM05D003931 ORTHO05D004577 8.9e-99 364.4 299 59.5
Sed0028072 Sechium edule HOM05D003931 ORTHO05D004577 8.9e-99 364.4 247 66.4
MSTRG.6909 Avicennia marina HOM05D003931 ORTHO05D004577 1.2e-98 364.0 291 58.4
PGSC0003DMG400022225 Solanum tuberosum HOM05D003931 ORTHO05D004577 2.6e-98 362.8 232 69.4
EL10Ac4g07844 Beta vulgaris HOM05D003931 ORTHO05D004577 3.4e-98 362.5 228 70.2
Gohir.A01G078700 Gossypium hirsutum HOM05D003931 ORTHO05D004577 4.4e-98 362.1 294 57.1
Lj1C870G17 Lonicera japonica HOM05D003931 ORTHO05D004577 4.4e-98 362.1 246 65.4
Gohir.D01G065800 Gossypium hirsutum HOM05D003931 ORTHO05D004577 9.8e-98 360.9 294 57.1
CAN.G337.115 Capsicum annuum HOM05D003931 ORTHO05D004577 1.3e-97 360.5 295 58.0
Ciclev10009005m.g Citrus clementina HOM05D003931 ORTHO05D004577 1.7e-97 360.1 311 57.6
Thecc.07G042800 Theobroma cacao HOM05D003931 ORTHO05D004577 1.7e-97 360.1 234 67.9
Medtr3g051220 Medicago truncatula HOM05D003931 ORTHO05D004577 2.2e-97 359.8 309 55.7
Glyma.18G099500 Glycine max HOM05D003931 ORTHO05D004577 2.9e-97 359.4 320 57.8
AUR62015742 Chenopodium quinoa HOM05D003931 ORTHO05D004577 4.9e-97 358.6 264 61.0
Sopen07g032620 Solanum pennellii HOM05D003931 ORTHO05D004577 6.4e-97 358.2 230 68.7
AUR62020469 Chenopodium quinoa HOM05D003931 ORTHO05D004577 8.3e-97 357.8 254 62.2
Eucgr.F00963 Eucalyptus grandis HOM05D003931 ORTHO05D004577 8.3e-97 357.8 311 56.6
Solyc07g064410.1 Solanum lycopersicum HOM05D003931 ORTHO05D004577 8.3e-97 357.8 230 68.7
TPR.G16574 Trifolium pratense HOM05D003931 ORTHO05D004577 1.1e-96 357.5 311 56.6
Aqoxy1G03269 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 1.4e-96 357.1 257 63.8
THA.LOC104809192 Tarenaya hassleriana HOM05D003931 ORTHO05D004577 1.8e-96 356.7 290 59.7
Ah.04g165790 Amaranthus hybridus HOM05D003931 ORTHO05D004577 2.4e-96 356.3 228 68.4
PGR083G2742 Punica granatum HOM05D003931 ORTHO05D004577 3.2e-96 355.9 233 69.5
Carub.0007s1381 Capsella rubella HOM05D003931 ORTHO05D004577 5.4e-96 355.1 291 57.4
Thhalv10027264m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 9.2e-96 354.4 230 68.3
VMungo0540G1582 Vigna mungo HOM05D003931 ORTHO05D004577 9.2e-96 354.4 304 57.2
A01p18190 Brassica napus HOM05D003931 ORTHO05D004577 1.2e-95 354.0 228 69.3
A08p20580 Brassica napus HOM05D003931 ORTHO05D004577 1.6e-95 353.6 228 69.3
BolC1t02250H Brassica oleracea HOM05D003931 ORTHO05D004577 1.6e-95 353.6 228 68.9
BraA08t34014Z Brassica rapa HOM05D003931 ORTHO05D004577 1.6e-95 353.6 228 69.3
Phvul.006G040800 Phaseolus vulgaris HOM05D003931 ORTHO05D004577 1.6e-95 353.6 299 57.2
BraA01t01774Z Brassica rapa HOM05D003931 ORTHO05D004577 3.5e-95 352.4 228 68.4
Cc05_g13590 Coffea canephora HOM05D003931 ORTHO05D004577 3.5e-95 352.4 334 54.8
SGA_v2.0_scaffold172G38997 Striga asiatica HOM05D003931 ORTHO05D004577 3.5e-95 352.4 250 64.8
Psat5g180680 Pisum sativum HOM05D003931 ORTHO05D004577 4.6e-95 352.1 265 62.6
BcaB03g12524 Brassica carinata HOM05D003931 ORTHO05D004577 5.9e-95 351.7 252 63.5
C01p23150 Brassica napus HOM05D003931 ORTHO05D004577 1.0e-94 350.9 243 65.8
Sc03g0008690 Simmondsia chinensis HOM05D003931 ORTHO05D004577 1.3e-94 350.5 309 56.6
BcaC07g38267 Brassica carinata HOM05D003931 ORTHO05D004577 1.7e-94 350.1 228 69.3
C08p10140 Brassica napus HOM05D003931 ORTHO05D004577 1.7e-94 350.1 228 69.3
BolC8t48692H Brassica oleracea HOM05D003931 ORTHO05D004577 1.7e-94 350.1 228 69.3
TAR626G0527 Trochodendron aralioides HOM05D003931 ORTHO05D004577 1.7e-94 350.1 247 63.6
Glyma.08G314700 Glycine max HOM05D003931 ORTHO05D004577 3.9e-94 349.0 305 56.4
PSO675G5012 Papaver somniferum HOM05D003931 ORTHO05D004577 3.9e-94 349.0 303 56.4
arahy.Tifrunner.gnm1.ann1.07EMGU Arachis hypogaea HOM05D003931 ORTHO05D004577 6.6e-94 348.2 309 56.3
Lalb_Chr06g0171911 Lupinus albus HOM05D003931 ORTHO05D004577 3.3e-93 345.9 256 61.3
PSO541G1838 Papaver somniferum HOM05D003931 ORTHO05D004577 3.3e-93 345.9 304 55.3
Lalb_Chr02g0155621 Lupinus albus HOM05D003931 ORTHO05D004577 7.3e-93 344.7 291 56.7
CARHR234700 Cardamine hirsuta HOM05D003931 ORTHO05D004577 9.5e-93 344.4 221 68.8
Sp7g25010 Schrenkiella parvula HOM05D003931 ORTHO05D004577 9.5e-93 344.4 228 67.1
Lj6g0018199 Lotus japonicus HOM05D003931 ORTHO05D004577 1.2e-92 344.0 325 54.8
Aa31LG5G10360 Aethionema arabicum HOM05D003931 ORTHO05D004577 1.0e-91 340.9 291 56.7
unitig_62.g23279 Utricularia gibba HOM05D003931 ORTHO05D004577 8.9e-91 337.8 235 63.8
Duzib213G0550 Durio zibethinus HOM05D003931 ORTHO05D004577 1.5e-90 337.0 244 62.3
AL7G25800 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 2.0e-90 336.7 294 55.8
vmacro11734 Vaccinium macrocarpon HOM05D003931 ORTHO05D004577 5.8e-90 335.1 233 63.9
Peaxi162Scf00450g00075 Petunia axillaris HOM05D003931 ORTHO05D004577 1.7e-89 333.6 214 70.6
Sc03g0008680 Simmondsia chinensis HOM05D003931 ORTHO05D004577 3.7e-89 332.4 294 57.1
ATR0752G116 Amborella trichopoda HOM05D003931 ORTHO05D004577 1.4e-88 330.5 245 61.6
AT4G27030 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 4.1e-88 328.9 294 54.4
Rhsim06G0216100 Rhododendron simsii HOM05D003931 ORTHO05D004577 9.2e-88 327.8 202 72.3
QL08p011463 Quercus lobata HOM05D003931 ORTHO05D004577 4.6e-87 325.5 243 62.1
CDE05G0277 Ceratophyllum demersum HOM05D003931 ORTHO05D007395 1.0e-86 324.3 234 62.4
Sp7g24990 Schrenkiella parvula HOM05D003931 ORTHO05D004577 1.7e-86 323.6 244 60.2
AT1G62190 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 3.0e-86 322.8 290 53.1
Carub.0002s0286 Capsella rubella HOM05D003931 ORTHO05D004577 6.6e-86 321.6 281 53.4
Thhalv10025879m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 8.6e-86 321.2 287 54.4
Nitab4.5_0004336g0020 Nicotiana tabacum HOM05D003931 ORTHO05D004577 8.6e-86 321.2 266 59.0
Lsat_1_v5_gn_5_5140 Lactuca sativa HOM05D003931 ORTHO05D004577 1.1e-85 320.9 222 62.6
Cfa009708 Carpinus fangiana HOM05D003931 ORTHO05D004577 2.5e-85 319.7 220 66.4
Thhalv10026787m.g Eutrema salsugineum HOM05D003931 ORTHO05D004577 9.5e-85 317.8 245 59.2
CARHR049940 Cardamine hirsuta HOM05D003931 ORTHO05D004577 2.8e-84 316.2 228 59.6
Haze_23062 Corylus avellana HOM05D003931 ORTHO05D004577 2.8e-84 316.2 223 65.5
PGSC0003DMG400004435 Solanum tuberosum HOM05D003931 ORTHO05D004577 4.7e-84 315.5 249 60.2
Aa31LG5G10380 Aethionema arabicum HOM05D003931 ORTHO05D004577 8.1e-84 314.7 246 58.9
Atru.chr2.3340 Acer truncatum HOM05D003931 ORTHO05D004577 1.8e-83 313.5 231 61.5
C07p55050 Brassica napus HOM05D003931 ORTHO05D004577 2.0e-82 310.1 286 50.3
Atru.chr2.3337 Acer truncatum HOM05D003931 ORTHO05D004577 3.4e-82 309.3 243 60.5
BcaC06g32716 Brassica carinata HOM05D003931 ORTHO05D004577 1.3e-81 307.4 269 53.2
AT2G22890 Arabidopsis thaliana HOM05D003931 ORTHO05D004577 2.2e-81 306.6 225 60.0
Carub.0004s0202 Capsella rubella HOM05D003931 ORTHO05D004577 3.7e-81 305.8 224 61.2
BraA03t14771Z Brassica rapa HOM05D003931 ORTHO05D004577 1.1e-80 304.3 244 55.7
A03p57020 Brassica napus HOM05D003931 ORTHO05D004577 3.2e-80 302.8 289 48.8
AL4G12480 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 4.1e-80 302.4 221 60.2
BolC7t46007H Brassica oleracea HOM05D003931 ORTHO05D004577 4.1e-80 302.4 258 52.3
AUR62015741 Chenopodium quinoa HOM05D003931 ORTHO05D004577 7.1e-80 301.6 256 53.1
Prupe.4G210500 Prunus persica HOM05D003931 ORTHO05D004577 1.7e-78 297.0 208 65.4
Lj6g0018599 Lotus japonicus HOM05D003931 ORTHO05D004577 3.9e-78 295.8 308 47.7
Sp7g25000 Schrenkiella parvula HOM05D003931 ORTHO05D004577 1.1e-77 294.3 229 58.5
Sc03g0008670 Simmondsia chinensis HOM05D003931 ORTHO05D004577 5.6e-77 292.0 278 52.9
CSS0050113 Camellia sinensis var. sinensis HOM05D003931 ORTHO05D004577 1.2e-76 290.8 198 66.7
Oeu062594.1 Olea europaea HOM05D003931 ORTHO05D004577 3.4e-74 282.7 229 55.9
BcaB03g12523 Brassica carinata HOM05D003931 ORTHO05D004577 7.6e-74 281.6 226 57.1
SEGI_34207 Sequoiadendron giganteum HOM05D003931 ORTHO05D004577 2.4e-72 276.6 252 51.6
CANSAT11G0562 Cannabis sativa HOM05D003931 ORTHO05D004577 1.6e-71 273.9 225 57.3
CANSAT11G1176 Cannabis sativa HOM05D003931 ORTHO05D004577 2.3e-70 270.0 220 55.9
BraA08t34015Z Brassica rapa HOM05D003931 ORTHO05D004577 3.9e-70 269.2 291 47.8
Cpa.g.sc97.27 Carica papaya HOM05D003931 ORTHO05D004577 6.6e-70 268.5 237 56.5
BcaC07g38266 Brassica carinata HOM05D003931 ORTHO05D004577 7.3e-69 265.0 226 55.3
C08p10100 Brassica napus HOM05D003931 ORTHO05D004577 7.3e-69 265.0 226 55.3
BolC8t48689H Brassica oleracea HOM05D003931 ORTHO05D004577 7.3e-69 265.0 226 55.3
BcaC07g38264 Brassica carinata HOM05D003931 ORTHO05D004577 9.6e-69 264.6 226 55.3
A08p20590 Brassica napus HOM05D003931 ORTHO05D004577 2.8e-68 263.1 226 54.9
COL.COLO4_09644 Corchorus olitorius HOM05D003931 ORTHO05D004577 2.8e-68 263.1 309 46.6
Zm00001eb413170 Zea mays HOM05D003931 ORTHO05D004577 2.8e-68 263.1 263 48.7
Os08g0187900 Oryza sativa ssp. japonica HOM05D003931 ORTHO05D004577 3.4e-66 256.1 260 48.8
Mapoly0034s0071 Marchantia polymorpha HOM05D003931 ORTHO05D004577 5.8e-66 255.4 229 51.1
QL09p032903 Quercus lobata HOM05D003931 ORTHO05D004577 4.9e-65 252.3 154 72.7
SGA_v2.0_scaffold9G05067 Striga asiatica HOM05D003931 ORTHO05D004577 6.0e-63 245.4 239 47.7
Pp3c13_12570 Physcomitrium patens HOM05D003931 ORTHO05D004577 1.3e-62 244.2 289 43.3
SMO364G0503 Selaginella moellendorffii HOM05D003931 ORTHO05D004577 1.3e-62 244.2 228 49.6
AagrBONN_evm.TU.Sc2ySwM_368.1941 Anthoceros agrestis HOM05D003931 ORTHO05D004577 6.6e-62 241.9 258 46.1
FAN11G0561 Fragaria x ananassa HOM05D003931 ORTHO05D004577 8.7e-62 241.5 213 54.5
Aqoxy1G03270 Aquilegia oxysepala HOM05D003931 ORTHO05D004577 3.3e-61 239.6 222 50.5
BolC8t48691H Brassica oleracea HOM05D003931 ORTHO05D004577 5.6e-61 238.8 191 57.6
Migut.H01834 Erythranthe guttata HOM05D003931 ORTHO05D004577 9.0e-59 231.5 230 46.1
Eucgr.L01106 Eucalyptus grandis HOM05D003931 ORTHO05D004577 4.4e-58 229.2 206 52.9
SGA_v2.0_scaffold9G05070 Striga asiatica HOM05D003931 ORTHO05D004577 7.1e-56 221.9 235 44.3
Cfa009711 Carpinus fangiana HOM05D003931 ORTHO05D004577 6.0e-55 218.8 185 59.5
Cre16.g673001 Chlamydomonas reinhardtii HOM05D003931 ORTHO05D004577 7.9e-55 218.4 263 42.6
Migut.H01835 Erythranthe guttata HOM05D003931 ORTHO05D004577 3.0e-54 216.5 229 43.7
unitig_749.g13966 Utricularia gibba HOM05D003931 ORTHO05D004577 3.0e-54 216.5 228 44.3
MCO05G373 Micromonas commoda HOM05D003931 ORTHO05D004577 3.3e-53 213.0 190 52.1
CDE05G0281 Ceratophyllum demersum HOM05D003931 ORTHO05D004577 4.3e-53 212.6 155 61.3
Migut.H01836 Erythranthe guttata HOM05D003931 ORTHO05D004577 7.4e-53 211.8 256 43.4
CBR_g30523 Chara braunii HOM05D003931 ORTHO05D004577 4.9e-49 199.1 316 36.7
COL.COLO4_07219 Corchorus olitorius HOM05D003931 ORTHO05D004577 4.9e-49 199.1 128 69.5
Zm00001eb413200 Zea mays HOM05D003931 ORTHO05D004577 4.9e-49 199.1 235 45.1
ECA246G1165 Erigeron canadensis HOM05D003931 ORTHO05D004577 3.5e-47 193.0 151 55.6
FvH4_3g22391 Fragaria vesca HOM05D003931 ORTHO05D004577 5.1e-46 189.1 189 49.2
PRCOL_00003954 Prasinoderma coloniale HOM05D003931 ORTHO05D004577 1.4e-43 181.0 221 39.8
Haze_23061 Corylus avellana HOM05D003931 ORTHO05D004577 9.0e-43 178.3 158 57.0
COL.COLO4_07218 Corchorus olitorius HOM05D003931 ORTHO05D004577 1.3e-38 164.5 110 67.3
AL3G48190 Arabidopsis lyrata HOM05D003931 ORTHO05D004577 5.9e-34 149.1 93 64.5
C01p23190 Brassica napus HOM05D003931 ORTHO05D004577 4.3e-29 132.9 112 53.6
C08p10120 Brassica napus HOM05D003931 ORTHO05D004577 7.7e-26 122.1 92 58.7
BcaC06g32715 Brassica carinata HOM05D003931 ORTHO05D004577 2.2e-17 94.0 60 73.3
unitig_26.g9960 Utricularia gibba HOM05D003931 ORTHO05D004577 3.2e-16 90.1 74 55.4
BcaC09g50623 Brassica carinata HOM05D003931 ORTHO05D004577 4.8e-12 76.3 50 70.0
unitig_26.g9959 Utricularia gibba HOM05D001404 ORTHO05D026306 3.0e-06 57.0 41 58.5


User provided reference genes

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