Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008049 Daucus carota HOM05D003743 ORTHO05D004311 4.5e-312 1073.9 655 100.0
Dinv07531 Davidia involucrata HOM05D003743 ORTHO05D004311 2.4e-231 805.8 658 71.1
DCAR_004097 Daucus carota HOM05D003743 ORTHO05D004311 2.3e-226 789.3 658 72.5
Hma1.2p1_0126F.1_g059170 Hydrangea macrophylla HOM05D003743 ORTHO05D004311 3.3e-220 768.8 660 67.7
CiPaw.10G046600 Carya illinoinensis HOM05D003743 ORTHO05D004311 1.8e-210 736.5 662 67.8
MELO3C017564.2 Cucumis melo HOM05D003743 ORTHO05D004311 4.4e-209 731.9 663 64.1
CSS0028072 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 9.8e-209 730.7 637 65.8
Haze_06507 Corylus avellana HOM05D003743 ORTHO05D004311 2.9e-208 729.2 662 66.3
DCAR_004099 Daucus carota HOM05D003743 ORTHO05D004311 2.9e-208 729.2 655 71.5
Cc02_g12930 Coffea canephora HOM05D003743 ORTHO05D004311 5.4e-207 724.9 654 64.1
CsaV3_4G005020 Cucumis sativus L. HOM05D003743 ORTHO05D004311 2.0e-206 723.0 663 61.8
Thecc.06G191600 Theobroma cacao HOM05D003743 ORTHO05D004311 7.8e-206 721.1 664 65.8
Gorai.011G025800 Gossypium raimondii HOM05D003743 ORTHO05D004311 3.0e-205 719.2 663 66.1
COL.COLO4_31510 Corchorus olitorius HOM05D003743 ORTHO05D004311 5.0e-205 718.4 664 68.1
Gohir.D10G024500 Gossypium hirsutum HOM05D003743 ORTHO05D004311 2.5e-204 716.1 664 66.0
Psat7g112160 Pisum sativum HOM05D003743 ORTHO05D004311 7.3e-204 714.5 661 63.4
Glyma.07G194200 Glycine max HOM05D003743 ORTHO05D004311 2.1e-203 713.0 662 63.6
Eucgr.E03353 Eucalyptus grandis HOM05D003743 ORTHO05D004311 6.2e-203 711.4 663 63.5
Manes.16G024900 Manihot esculenta HOM05D003743 ORTHO05D004311 8.1e-203 711.1 662 63.3
Prupe.3G050300 Prunus persica HOM05D003743 ORTHO05D004311 1.8e-202 709.9 664 63.4
Gohir.A10G023800 Gossypium hirsutum HOM05D003743 ORTHO05D004311 4.0e-202 708.8 664 65.2
VMungo0251G3484 Vigna mungo HOM05D003743 ORTHO05D004311 4.0e-202 708.8 663 64.1
Nitab4.5_0003668g0110 Nicotiana tabacum HOM05D003743 ORTHO05D004311 3.4e-201 705.7 658 65.5
Glyma.13G182500 Glycine max HOM05D003743 ORTHO05D004311 4.4e-201 705.3 662 63.3
Medtr4g089070 Medicago truncatula HOM05D003743 ORTHO05D004311 7.5e-201 704.5 661 62.5
Ca_25733_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 1.7e-200 703.4 665 65.0
QL05p039342 Quercus lobata HOM05D003743 ORTHO05D004311 2.9e-200 702.6 661 67.3
QL10p057179 Quercus lobata HOM05D003743 ORTHO05D004311 2.9e-200 702.6 661 67.3
Lalb_Chr05g0218341 Lupinus albus HOM05D003743 ORTHO05D004311 3.7e-200 702.2 661 63.4
Duzib160G0164 Durio zibethinus HOM05D003743 ORTHO05D004311 4.9e-200 701.8 664 64.8
MD10G1061800 Malus domestica HOM05D003743 ORTHO05D004311 1.1e-199 700.7 664 63.7
Phvul.002G226300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 5.4e-199 698.4 663 63.0
RcHm_v2.0_Chr5g0007801 Rosa chinensis HOM05D003743 ORTHO05D004311 4.6e-198 695.3 665 61.5
Cpa.g.sc27.76 Carica papaya HOM05D003743 ORTHO05D004311 6.0e-198 694.9 668 62.3
Sed0012938 Sechium edule HOM05D003743 ORTHO05D004311 6.0e-198 694.9 663 61.4
TPR.G12063 Trifolium pratense HOM05D003743 ORTHO05D004311 7.8e-198 694.5 661 63.8
Nitab4.5_0003347g0010 Nicotiana tabacum HOM05D003743 ORTHO05D004311 6.6e-197 691.4 659 64.6
PGSC0003DMG400022434 Solanum tuberosum HOM05D003743 ORTHO05D004311 1.1e-196 690.6 665 63.6
Duzib235G1026 Durio zibethinus HOM05D003743 ORTHO05D004311 1.5e-196 690.3 664 63.4
RhsimUnG0044100 Rhododendron simsii HOM05D003743 ORTHO05D004311 3.3e-196 689.1 675 61.6
Potri.004G039500 Populus trichocarpa HOM05D003743 ORTHO05D004311 4.3e-196 688.7 664 61.9
FAN16G2290 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.6e-195 686.8 661 61.0
Peaxi162Scf00379g00092 Petunia axillaris HOM05D003743 ORTHO05D004311 8.1e-195 684.5 675 62.4
Lsat_1_v5_gn_2_40361 Lactuca sativa HOM05D003743 ORTHO05D004311 1.1e-194 684.1 663 61.4
PGR042G1300 Punica granatum HOM05D003743 ORTHO05D004311 1.8e-194 683.3 670 58.8
Ciclev10028000m.g Citrus clementina HOM05D003743 ORTHO05D004311 2.3e-194 682.9 662 64.5
Sopen02g023440 Solanum pennellii HOM05D003743 ORTHO05D004311 3.1e-194 682.6 665 62.9
FAN14G3620 Fragaria x ananassa HOM05D003743 ORTHO05D004311 4.0e-194 682.2 661 60.7
Solyc02g078580.1 Solanum lycopersicum HOM05D003743 ORTHO05D004311 4.0e-194 682.2 665 62.7
Lj4g0023106 Lotus japonicus HOM05D003743 ORTHO05D004311 5.2e-194 681.8 664 65.7
FAN03G0627 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.5e-193 680.2 661 62.2
TAR627G0572 Trochodendron aralioides HOM05D003743 ORTHO05D004311 2.0e-193 679.9 666 61.9
FAN21G0113 Fragaria x ananassa HOM05D003743 ORTHO05D004311 2.6e-193 679.5 661 60.4
FvH4_3g04783 Fragaria vesca HOM05D003743 ORTHO05D004311 5.8e-193 678.3 661 60.4
Lj8P171T25 Lonicera japonica HOM05D003743 ORTHO05D004311 5.8e-193 678.3 541 73.2
Rhsim07G0025200 Rhododendron simsii HOM05D003743 ORTHO05D004311 2.2e-192 676.4 675 60.9
Sabra11G0033300 Salix brachista HOM05D003743 ORTHO05D004311 2.2e-192 676.4 666 61.4
Sabra04G0024300 Salix brachista HOM05D003743 ORTHO05D004311 4.9e-192 675.2 662 62.1
TAR629G2996 Trochodendron aralioides HOM05D003743 ORTHO05D004311 4.9e-192 675.2 673 61.2
Potri.011G047900 Populus trichocarpa HOM05D003743 ORTHO05D004311 1.4e-191 673.7 666 60.5
CAN.G1627.16 Capsicum annuum HOM05D003743 ORTHO05D004311 3.0e-189 666.0 680 62.8
TWI23G0181 Tripterygium wilfordii HOM05D003743 ORTHO05D004311 3.9e-189 665.6 663 58.8
Oeu050830.1 Olea europaea HOM05D003743 ORTHO05D004311 4.3e-188 662.1 659 59.0
HanXRQChr10g0285841 Helianthus annuus HOM05D003743 ORTHO05D004311 2.4e-186 656.4 613 61.2
arahy.Tifrunner.gnm1.ann1.I4CLDN Arachis hypogaea HOM05D003743 ORTHO05D004311 4.0e-186 655.6 660 58.5
Migut.M01180 Erythranthe guttata HOM05D003743 ORTHO05D004311 8.9e-186 654.4 663 60.8
CANSAT35G0257 Cannabis sativa HOM05D003743 ORTHO05D004311 4.9e-184 648.7 678 63.9
Aa31LG2G9550 Aethionema arabicum HOM05D003743 ORTHO05D004311 8.4e-184 647.9 662 59.1
CSS0027200 Camellia sinensis var. sinensis HOM05D003743 ORTHO05D004311 7.8e-182 641.3 659 59.8
THA.LOC104819165 Tarenaya hassleriana HOM05D003743 ORTHO05D004311 1.0e-181 641.0 662 56.3
QL03p016879 Quercus lobata HOM05D003743 ORTHO05D004311 5.1e-181 638.6 662 58.8
Atru.chr7.2377 Acer truncatum HOM05D003743 ORTHO05D004311 6.6e-181 638.3 659 60.4
SGA_v2.0_scaffold100G29640 Striga asiatica HOM05D003743 ORTHO05D004311 1.3e-179 634.0 659 57.7
Nn1g07800 Nelumbo nucifera HOM05D003743 ORTHO05D004311 2.1e-179 633.3 670 60.0
PSO170G2796 Papaver somniferum HOM05D003743 ORTHO05D004311 5.8e-177 625.2 659 59.5
PSO210G5871 Papaver somniferum HOM05D003743 ORTHO05D004311 8.4e-176 621.3 662 59.5
Thhalv10023338m.g Eutrema salsugineum HOM05D003743 ORTHO05D004311 2.4e-175 619.8 661 55.2
SalBow8G3648 Salvia bowleyana HOM05D003743 ORTHO05D004311 5.4e-175 618.6 659 57.5
Sc05g0007850 Simmondsia chinensis HOM05D003743 ORTHO05D004311 2.1e-174 616.7 661 59.0
AT1G61040 Arabidopsis thaliana HOM05D003743 ORTHO05D004311 3.5e-174 615.9 661 55.8
unitig_748.g8020 Utricularia gibba HOM05D003743 ORTHO05D004311 7.9e-174 614.8 657 58.6
Ah.09g235750 Amaranthus hybridus HOM05D003743 ORTHO05D004311 1.7e-173 613.6 663 57.3
BcaC06g31829 Brassica carinata HOM05D003743 ORTHO05D004311 3.0e-173 612.8 670 54.6
AL2G15400 Arabidopsis lyrata HOM05D003743 ORTHO05D004311 3.9e-173 612.5 661 55.7
Prupe.6G309900 Prunus persica HOM05D003743 ORTHO05D004311 5.1e-173 612.1 660 55.0
RcHm_v2.0_Chr3g0457571 Rosa chinensis HOM05D003743 ORTHO05D004311 6.6e-173 611.7 659 55.2
Carub.0002s0416 Capsella rubella HOM05D003743 ORTHO05D004311 1.1e-172 610.9 661 56.0
HPP92_024423 Vanilla planifolia HOM05D003743 ORTHO05D004311 2.1e-171 606.7 663 53.2
FvH4_6g07870 Fragaria vesca HOM05D003743 ORTHO05D004311 3.6e-171 605.9 660 53.9
FAN25G1603 Fragaria x ananassa HOM05D003743 ORTHO05D004311 8.1e-171 604.7 611 60.1
EL10Ac8g20336 Beta vulgaris HOM05D003743 ORTHO05D004311 1.4e-170 604.0 663 56.0
BcaC02g10594 Brassica carinata HOM05D003743 ORTHO05D004311 4.0e-170 602.4 663 55.2
C04p25600 Brassica napus HOM05D003743 ORTHO05D004311 4.0e-170 602.4 663 55.2
CARHR052180 Cardamine hirsuta HOM05D003743 ORTHO05D004311 6.9e-170 601.7 658 54.7
ECA240G0220 Erigeron canadensis HOM05D003743 ORTHO05D004311 1.5e-169 600.5 678 55.9
Glyma.03G168800 Glycine max HOM05D003743 ORTHO05D004311 3.4e-169 599.4 662 57.4
FAN14G1138 Fragaria x ananassa HOM05D003743 ORTHO05D004311 5.8e-169 598.6 660 53.3
A01p29850 Brassica napus HOM05D003743 ORTHO05D004311 1.7e-168 597.0 666 56.3
FAN09G3903 Fragaria x ananassa HOM05D003743 ORTHO05D004311 2.2e-168 596.7 660 53.5
Sp2g03480 Schrenkiella parvula HOM05D003743 ORTHO05D004311 2.2e-168 596.7 669 53.5
FAN05G4405 Fragaria x ananassa HOM05D003743 ORTHO05D004311 3.8e-168 595.9 660 53.5
Ca_08759_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 4.9e-168 595.5 548 63.7
Ca_30219_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 4.9e-168 595.5 548 63.7
Aqoxy1G03805 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 3.2e-167 592.8 663 53.7
BcaB04g20309 Brassica carinata HOM05D003743 ORTHO05D004311 9.3e-167 591.3 675 56.3
C01p37700 Brassica napus HOM05D003743 ORTHO05D004311 9.3e-167 591.3 666 52.9
Lj1g0019037 Lotus japonicus HOM05D003743 ORTHO05D004311 2.1e-166 590.1 657 58.6
Psat3g052160 Pisum sativum HOM05D003743 ORTHO05D004311 6.0e-166 588.6 602 60.6
Glyma.19G170200 Glycine max HOM05D003743 ORTHO05D004311 2.3e-165 586.6 662 55.9
BraA01t03113Z Brassica rapa HOM05D003743 ORTHO05D004311 1.5e-164 583.9 665 56.1
FAN02G2028 Fragaria x ananassa HOM05D003743 ORTHO05D004311 1.5e-164 583.9 659 53.0
MBI04_g36401_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 2.5e-164 583.2 673 56.2
BcaC09g49339 Brassica carinata HOM05D003743 ORTHO05D004311 3.3e-164 582.8 661 52.6
SHI01836 Sapria himalayana HOM05D003743 ORTHO05D004311 1.3e-163 580.9 672 54.6
Lalb_Chr16g0383591 Lupinus albus HOM05D003743 ORTHO05D004311 1.6e-163 580.5 657 55.3
Phvul.001G167200 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 6.2e-163 578.6 664 53.8
Phvul.001G224300 Phaseolus vulgaris HOM05D003743 ORTHO05D004311 7.6e-161 571.6 669 50.7
CANSAT54G1490 Cannabis sativa HOM05D003743 ORTHO05D004311 8.4e-160 568.2 657 52.5
AUR62016972 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.1e-159 567.8 674 53.7
VMungo1383G2741 Vigna mungo HOM05D003743 ORTHO05D004311 7.1e-159 565.1 669 50.4
CDE02G2043 Ceratophyllum demersum HOM05D003743 ORTHO05D004311 9.3e-159 564.7 661 54.9
Lalb_Chr04g0260391 Lupinus albus HOM05D003743 ORTHO05D004311 7.9e-158 561.6 671 52.0
ATR0763G146 Amborella trichopoda HOM05D003743 ORTHO05D004311 1.8e-157 560.5 671 52.2
MBI16_g34925_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 7.4e-156 555.1 662 57.6
SEGI_13209 Sequoiadendron giganteum HOM05D003743 ORTHO05D004311 1.3e-155 554.3 665 53.5
AUR62014784 Chenopodium quinoa HOM05D003743 ORTHO05D004311 2.8e-155 553.1 652 56.6
TPR.G30857 Trifolium pratense HOM05D003743 ORTHO05D004311 6.3e-155 552.0 664 54.1
Ah.04g152550 Amaranthus hybridus HOM05D003743 ORTHO05D004311 1.2e-153 547.7 667 50.5
VMungo1383G3375 Vigna mungo HOM05D003743 ORTHO05D004311 4.5e-153 545.8 657 51.6
MD04G1191400 Malus domestica HOM05D003743 ORTHO05D004311 1.3e-152 544.3 653 50.4
Aqoxy3G03252 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 2.5e-151 540.0 667 51.0
Medtr7g099060 Medicago truncatula HOM05D003743 ORTHO05D004311 3.2e-151 539.7 568 57.6
Glyma.03G230500 Glycine max HOM05D003743 ORTHO05D004311 3.9e-149 532.7 674 53.0
AUR62020979 Chenopodium quinoa HOM05D003743 ORTHO05D004311 4.3e-148 529.3 659 49.2
Zm00001eb410600 Zea mays HOM05D003743 ORTHO05D004311 2.5e-143 513.5 667 50.1
Zm00001eb137720 Zea mays HOM05D003743 ORTHO05D004311 3.0e-141 506.5 666 48.9
Psat7g225840 Pisum sativum HOM05D003743 ORTHO05D004311 4.3e-140 502.7 682 47.7
Ca_20186_v3 Cicer arietinum L. HOM05D003743 ORTHO05D004311 1.7e-139 500.7 686 49.1
Medtr4g032885 Medicago truncatula HOM05D003743 ORTHO05D004311 1.1e-138 498.0 677 51.7
Os12g0535900 Oryza sativa ssp. japonica HOM05D003743 ORTHO05D004311 2.4e-138 496.9 624 51.8
TPR.G34103 Trifolium pratense HOM05D003743 ORTHO05D004311 2.2e-136 490.3 687 48.2
EL10Ac8g18529 Beta vulgaris HOM05D003743 ORTHO05D004311 1.9e-135 487.3 546 53.7
Sc06g0009130 Simmondsia chinensis HOM05D003743 ORTHO05D004311 5.5e-135 485.7 483 57.6
Lj1g0026238 Lotus japonicus HOM05D003743 ORTHO05D004311 4.7e-134 482.6 660 46.5
arahy.Tifrunner.gnm1.ann1.58ANB0 Arachis hypogaea HOM05D003743 ORTHO05D004311 7.9e-134 481.9 666 50.3
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 1.0e-133 481.5 663 45.6
MBI16_g34928_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 3.1e-130 469.9 648 53.1
Mapoly0001s0024 Marchantia polymorpha HOM05D003743 ORTHO05D004311 2.7e-118 430.3 679 47.9
Actinidia05611 Actinidia chinensis HOM05D003743 ORTHO05D004311 1.8e-117 427.6 401 67.1
Pp3c12_17420 Physcomitrium patens HOM05D003743 ORTHO05D004311 2.2e-112 410.6 613 43.6
AagrBONN_evm.TU.Sc2ySwM_368.1522 Anthoceros agrestis HOM05D003743 ORTHO05D004311 1.8e-109 401.0 666 41.7
Glyma.13G060000 Glycine max HOM05D003743 ORTHO05D004311 4.7e-94 349.7 400 53.8
FvH4_6g03621 Fragaria vesca HOM05D003743 ORTHO05D004311 3.1e-93 347.1 401 52.9
BolC1t03734H Brassica oleracea HOM05D003743 ORTHO05D004311 7.8e-89 332.4 425 48.2
SMO118G0429 Selaginella moellendorffii HOM05D003743 ORTHO05D004311 9.2e-82 308.9 556 41.5
Mapoly0009s0176 Marchantia polymorpha HOM05D003743 ORTHO05D004311 1.2e-81 308.5 670 38.4
A03p68920 Brassica napus HOM05D003743 ORTHO05D004311 3.5e-81 307.0 661 37.7
Oeu016117.1 Olea europaea HOM05D003743 ORTHO05D004311 7.8e-81 305.8 653 40.7
Lj1P877T22 Lonicera japonica HOM05D003743 ORTHO05D004311 2.3e-80 304.3 309 54.7
ECA248G2279 Erigeron canadensis HOM05D003743 ORTHO05D004311 6.2e-78 296.2 406 44.6
GSVIVG01006453001 Vitis vinifera HOM05D003743 ORTHO05D004311 6.0e-73 279.6 236 66.9
BraSC39t46172Z Brassica rapa HOM05D003743 ORTHO05D004311 9.9e-68 262.3 544 37.5
CBR_g30024 Chara braunii HOM05D003743 ORTHO05D004311 1.6e-62 245.0 643 32.8
Zm00001eb087640 Zea mays HOM05D003743 ORTHO05D004311 2.4e-50 204.5 272 43.4
Lalb_Chr20g0113451 Lupinus albus HOM05D003743 ORTHO05D004311 8.7e-32 142.9 119 59.7
FvH4_6g03622 Fragaria vesca HOM05D003743 ORTHO05D004311 2.6e-28 131.3 77 83.1
ECA246G3327 Erigeron canadensis HOM05D001482 ORTHO05D001499 2.1e-25 121.7 81 76.5
Aqoxy3G03215 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 3.6e-25 120.9 109 56.0
EL10Ac4g08952 Beta vulgaris HOM05D003743 ORTHO05D004311 2.2e-22 111.7 164 47.0
MBI04_g35990_MAGBIO Magnolia biondii HOM05D003743 ORTHO05D004311 2.2e-22 111.7 223 39.9
Cre03.g196450 Chlamydomonas reinhardtii HOM05D003743 ORTHO05D004311 4.5e-20 104.0 276 29.3
SGA_v2.0_scaffold49G18283 Striga asiatica HOM05D003743 ORTHO05D004311 7.7e-20 103.2 399 24.8
Aqoxy3G03213 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 3.6e-17 94.4 74 64.9
Rhsim02G0125200 Rhododendron simsii HOM05D003743 ORTHO05D004311 3.0e-16 91.3 61 67.2
Aqoxy3G03214 Aquilegia oxysepala HOM05D003743 ORTHO05D004311 8.2e-14 83.2 78 64.1
MD05G1317500 Malus domestica HOM05D003743 ORTHO05D004311 5.9e-12 77.0 125 43.2
EL10Ac5g12107 Beta vulgaris HOM05D003743 ORTHO05D004311 2.1e-09 68.6 45 66.7
SEGI_28495 Sequoiadendron giganteum HOM05D003743 ORTHO05D004311 8.8e-08 63.2 81 51.9
PRCOL_00005809 Prasinoderma coloniale HOM05D003743 ORTHO05D004311 5.7e-07 60.5 407 24.1


User provided reference genes

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