Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_008034 Daucus carota HOM05D005446 ORTHO05D006597 2.3e-84 315.5 155 100.0
DCAR_019328 Daucus carota HOM05D005446 ORTHO05D006597 1.5e-67 259.6 133 92.5
Lj3A584T51 Lonicera japonica HOM05D005446 ORTHO05D006597 1.3e-63 246.5 153 75.8
Dinv17279 Davidia involucrata HOM05D005446 ORTHO05D006597 3.9e-63 245.0 153 77.1
Potri.015G001200 Populus trichocarpa HOM05D005446 ORTHO05D006597 3.9e-63 245.0 153 77.1
CSS0004780 Camellia sinensis var. sinensis HOM05D005446 ORTHO05D006597 7.3e-62 240.7 153 77.1
Sabra15G0000700 Salix brachista HOM05D005446 ORTHO05D006597 9.5e-62 240.4 153 75.2
Lj1A1031T79 Lonicera japonica HOM05D005446 ORTHO05D006597 1.6e-61 239.6 153 73.2
Haze_23920 Corylus avellana HOM05D005446 ORTHO05D006597 4.7e-61 238.0 153 75.2
TAR383G0718 Trochodendron aralioides HOM05D005446 ORTHO05D006597 6.2e-61 237.7 153 73.9
vmacro06473 Vaccinium macrocarpon HOM05D005446 ORTHO05D006597 6.2e-61 237.7 153 74.5
Haze_00330 Corylus avellana HOM05D005446 ORTHO05D006597 8.1e-61 237.3 153 74.5
Migut.F00126 Erythranthe guttata HOM05D005446 ORTHO05D006597 8.1e-61 237.3 153 75.8
Rhsim03G0218300 Rhododendron simsii HOM05D005446 ORTHO05D006597 8.1e-61 237.3 153 75.2
Oeu029325.1 Olea europaea HOM05D005446 ORTHO05D006597 1.1e-60 236.9 153 73.2
GSVIVG01038676001 Vitis vinifera HOM05D005446 ORTHO05D006597 1.1e-60 236.9 153 73.2
COL.COLO4_20178 Corchorus olitorius HOM05D005446 ORTHO05D006597 1.4e-60 236.5 153 71.9
Actinidia08718 Actinidia chinensis HOM05D005446 ORTHO05D006597 1.8e-60 236.1 153 75.2
Cfa016130 Carpinus fangiana HOM05D005446 ORTHO05D006597 2.3e-60 235.7 153 73.9
Atru.chr12.2505 Acer truncatum HOM05D005446 ORTHO05D006597 5.2e-60 234.6 153 71.9
EL10Ac3g05135 Beta vulgaris HOM05D005446 ORTHO05D006597 5.2e-60 234.6 153 69.9
Nn1g09694 Nelumbo nucifera HOM05D005446 ORTHO05D006597 6.8e-60 234.2 153 74.5
Atru.chr12.2528 Acer truncatum HOM05D005446 ORTHO05D006597 1.2e-59 233.4 153 71.2
Eucgr.K00477 Eucalyptus grandis HOM05D005446 ORTHO05D006597 1.5e-59 233.0 153 70.6
Potri.015G001000 Populus trichocarpa HOM05D005446 ORTHO05D006597 1.5e-59 233.0 153 74.5
Eucgr.K00475 Eucalyptus grandis HOM05D005446 ORTHO05D006597 2.0e-59 232.6 153 71.2
Peaxi162Scf00038g02639 Petunia axillaris HOM05D005446 ORTHO05D006597 2.0e-59 232.6 153 71.2
Eucgr.L02508 Eucalyptus grandis HOM05D005446 ORTHO05D006597 2.6e-59 232.3 153 71.2
MBI12_g19204_MAGBIO Magnolia biondii HOM05D005446 ORTHO05D006597 2.6e-59 232.3 153 73.2
Peaxi162Scf00192g00016 Petunia axillaris HOM05D005446 ORTHO05D006597 4.4e-59 231.5 153 70.6
CiPaw.06G038600 Carya illinoinensis HOM05D005446 ORTHO05D006597 5.8e-59 231.1 153 71.9
AUR62028113 Chenopodium quinoa HOM05D005446 ORTHO05D006597 5.8e-59 231.1 153 69.3
AUR62005952 Chenopodium quinoa HOM05D005446 ORTHO05D006597 7.5e-59 230.7 153 69.3
Duzib151G0274 Durio zibethinus HOM05D005446 ORTHO05D006597 7.5e-59 230.7 153 69.9
Thecc.04G200100 Theobroma cacao HOM05D005446 ORTHO05D006597 7.5e-59 230.7 153 69.9
Ciclev10006132m.g Citrus clementina HOM05D005446 ORTHO05D006597 9.9e-59 230.3 153 71.9
Manes.18G108200 Manihot esculenta HOM05D005446 ORTHO05D006597 1.7e-58 229.6 153 71.2
QL09p006048 Quercus lobata HOM05D005446 ORTHO05D006597 1.7e-58 229.6 153 70.6
Sopen01g002260 Solanum pennellii HOM05D005446 ORTHO05D006597 2.9e-58 228.8 153 69.3
MSTRG.26955 Avicennia marina HOM05D005446 ORTHO05D006597 3.7e-58 228.4 153 71.2
Cpa.g.sc3.182 Carica papaya HOM05D005446 ORTHO05D006597 4.9e-58 228.0 153 68.6
Gorai.001G114700 Gossypium raimondii HOM05D005446 ORTHO05D006597 4.9e-58 228.0 153 68.0
Hund09744 Selenicereus undatus HOM05D005446 ORTHO05D006597 4.9e-58 228.0 153 70.6
Gohir.A07G102600 Gossypium hirsutum HOM05D005446 ORTHO05D006597 8.3e-58 227.3 153 67.3
TWI18G0511 Tripterygium wilfordii HOM05D005446 ORTHO05D006597 8.3e-58 227.3 153 69.3
PSO782G3129 Papaver somniferum HOM05D005446 ORTHO05D006597 1.1e-57 226.9 153 69.3
ECA247G1253 Erigeron canadensis HOM05D005446 ORTHO05D006597 2.4e-57 225.7 153 70.6
PSO170G1626 Papaver somniferum HOM05D005446 ORTHO05D006597 2.4e-57 225.7 153 68.6
PGSC0003DMG400032145 Solanum tuberosum HOM05D005446 ORTHO05D006597 3.2e-57 225.3 153 68.0
CANSAT64G2376 Cannabis sativa HOM05D005446 ORTHO05D006597 5.4e-57 224.6 153 70.6
Gohir.D07G001000 Gossypium hirsutum HOM05D005446 ORTHO05D006597 5.4e-57 224.6 153 66.7
ClCG09G010380 Citrullus lanatus HOM05D005446 ORTHO05D006597 2.1e-56 222.6 153 69.9
Glyma.02G221100 Glycine max HOM05D005446 ORTHO05D006597 2.7e-56 222.2 153 67.3
Gohir.D07G106600 Gossypium hirsutum HOM05D005446 ORTHO05D006597 2.7e-56 222.2 153 66.7
Aqoxy5G00887 Aquilegia oxysepala HOM05D005446 ORTHO05D006597 4.6e-56 221.5 152 70.4
Gorai.001G000500 Gossypium raimondii HOM05D005446 ORTHO05D006597 6.0e-56 221.1 153 65.4
HanXRQChr02g0037361 Helianthus annuus HOM05D005446 ORTHO05D006597 6.0e-56 221.1 153 70.6
Cc02_g16080 Coffea canephora HOM05D005446 ORTHO05D006597 7.8e-56 220.7 153 70.6
CsaV3_7G024240 Cucumis sativus L. HOM05D005446 ORTHO05D006597 7.8e-56 220.7 153 70.6
SGA_v2.0_scaffold44G16871 Striga asiatica HOM05D005446 ORTHO05D006597 7.8e-56 220.7 172 64.0
CSS0007128 Camellia sinensis var. sinensis HOM05D005446 ORTHO05D006597 1.3e-55 219.9 154 70.1
CSS0045409 Camellia sinensis var. sinensis HOM05D005446 ORTHO05D006597 1.3e-55 219.9 154 70.1
CAN.G140.1 Capsicum annuum HOM05D005446 ORTHO05D006597 1.3e-55 219.9 153 68.0
unitig_0.g2433 Utricularia gibba HOM05D005446 ORTHO05D006597 1.3e-55 219.9 153 70.6
Glyma.14G188600 Glycine max HOM05D005446 ORTHO05D006597 3.0e-55 218.8 153 68.0
FAN01G0680 Fragaria x ananassa HOM05D005446 ORTHO05D006597 3.9e-55 218.4 153 68.0
HanXRQChr02g0037371 Helianthus annuus HOM05D005446 ORTHO05D006597 5.1e-55 218.0 150 70.7
FvH4_7g33290 Fragaria vesca HOM05D005446 ORTHO05D006597 6.6e-55 217.6 153 66.7
FAN03G2203 Fragaria x ananassa HOM05D005446 ORTHO05D006597 6.6e-55 217.6 153 68.0
FAN10G1830 Fragaria x ananassa HOM05D005446 ORTHO05D006597 8.6e-55 217.2 153 67.3
RcHm_v2.0_Chr1g0383271 Rosa chinensis HOM05D005446 ORTHO05D006597 3.3e-54 215.3 153 67.3
CDE07G1092 Ceratophyllum demersum HOM05D005446 ORTHO05D006597 4.3e-54 214.9 153 65.4
Lsat_1_v5_gn_1_26901 Lactuca sativa HOM05D005446 ORTHO05D006597 9.5e-54 213.8 153 69.9
Solyc01g006260.4 Solanum lycopersicum HOM05D005446 ORTHO05D006597 1.2e-53 213.4 143 68.5
Gohir.A03G015000 Gossypium hirsutum HOM05D005446 ORTHO05D006597 2.1e-53 212.6 153 65.4
Sed0027394 Sechium edule HOM05D005446 ORTHO05D006597 2.8e-53 212.2 153 66.0
TAR629G0354 Trochodendron aralioides HOM05D005446 ORTHO05D006597 6.2e-53 211.1 143 70.6
ATR0579G170 Amborella trichopoda HOM05D005446 ORTHO05D006597 8.1e-53 210.7 147 65.3
MELO3C023673.2 Cucumis melo HOM05D005446 ORTHO05D006597 8.1e-53 210.7 153 67.3
LjContig00155g0018941 Lotus japonicus HOM05D005446 ORTHO05D006597 1.8e-52 209.5 153 64.7
Nitab4.5_0005132g0070 Nicotiana tabacum HOM05D005446 ORTHO05D006597 1.8e-52 209.5 152 66.4
AL1G14320 Arabidopsis lyrata HOM05D005446 ORTHO05D006597 2.4e-52 209.1 154 64.9
CARHR003990 Cardamine hirsuta HOM05D005446 ORTHO05D006597 3.1e-52 208.8 154 64.3
Lalb_Chr10g0102991 Lupinus albus HOM05D005446 ORTHO05D006597 3.1e-52 208.8 154 66.9
Eucgr.K00052 Eucalyptus grandis HOM05D005446 ORTHO05D006597 4.0e-52 208.4 150 67.3
Phvul.001G010300 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 4.0e-52 208.4 153 66.7
Phvul.008G188200 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 4.0e-52 208.4 153 66.7
Phvul.L008700 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 5.2e-52 208.0 153 66.7
Medtr5g068650 Medicago truncatula HOM05D005446 ORTHO05D006597 1.2e-51 206.8 150 66.7
Ah.13g071020 Amaranthus hybridus HOM05D005446 ORTHO05D006597 1.5e-51 206.5 212 52.4
Carub.0001s0387 Capsella rubella HOM05D005446 ORTHO05D006597 1.5e-51 206.5 154 64.3
Prupe.2G321800 Prunus persica HOM05D005446 ORTHO05D006597 1.5e-51 206.5 153 64.7
MD07G1303100 Malus domestica HOM05D005446 ORTHO05D006597 2.0e-51 206.1 153 62.7
Aa31LG10G6780 Aethionema arabicum HOM05D005446 ORTHO05D006597 2.6e-51 205.7 154 63.6
AT1G04635 Arabidopsis thaliana HOM05D005446 ORTHO05D006597 2.6e-51 205.7 154 63.6
Eucgr.K00059 Eucalyptus grandis HOM05D005446 ORTHO05D006597 2.6e-51 205.7 150 67.3
Ca_05549_v3 Cicer arietinum L. HOM05D005446 ORTHO05D006597 3.4e-51 205.3 150 64.7
Phvul.003G000356 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 4.4e-51 204.9 153 66.0
RcHm_v2.0_Chr3g0479561 Rosa chinensis HOM05D005446 ORTHO05D006597 1.3e-50 203.4 153 64.7
Zm00001eb200370 Zea mays HOM05D005446 ORTHO05D006597 2.2e-50 202.6 153 62.7
Thhalv10009004m.g Eutrema salsugineum HOM05D005446 ORTHO05D006597 6.4e-50 201.1 154 63.6
Nitab4.5_0022559g0010 Nicotiana tabacum HOM05D005446 ORTHO05D006597 6.4e-50 201.1 127 73.2
VMungo0647G1380 Vigna mungo HOM05D005446 ORTHO05D006597 1.4e-49 199.9 144 66.7
Sp4g14630 Schrenkiella parvula HOM05D005446 ORTHO05D006597 1.0e-47 193.7 151 60.3
MD01G1231100 Malus domestica HOM05D005446 ORTHO05D006597 1.3e-47 193.4 144 63.2
A10p03070 Brassica napus HOM05D002401 ORTHO05D007109 1.7e-47 193.0 145 60.0
BraA10t42580Z Brassica rapa HOM05D002401 ORTHO05D007109 1.7e-47 193.0 145 60.7
BolC5t29066H Brassica oleracea HOM05D002401 ORTHO05D007109 2.3e-47 192.6 144 61.1
C05p02830 Brassica napus HOM05D002401 ORTHO05D007109 3.0e-47 192.2 144 61.1
Os04g0295100 Oryza sativa ssp. japonica HOM05D005446 ORTHO05D006597 3.9e-47 191.8 163 59.5
THA.LOC104820657 Tarenaya hassleriana HOM05D005446 ORTHO05D006597 3.9e-47 191.8 154 63.6
HPP92_023794 Vanilla planifolia HOM05D005446 ORTHO05D006597 3.9e-47 191.8 153 58.2
SHI13471 Sapria himalayana HOM05D005446 ORTHO05D006597 1.5e-46 189.9 188 53.7
QL04p035447 Quercus lobata HOM05D005446 ORTHO05D006597 2.5e-46 189.1 135 65.2
Os05g0270500 Oryza sativa ssp. japonica HOM05D005446 ORTHO05D006597 7.3e-46 187.6 149 61.1
Sp1g03470 Schrenkiella parvula HOM05D005446 ORTHO05D006597 9.6e-46 187.2 153 58.2
TPR.G5849 Trifolium pratense HOM05D005446 ORTHO05D006597 1.6e-45 186.4 150 60.0
Thhalv10017414m.g Eutrema salsugineum HOM05D005446 ORTHO05D006597 3.1e-44 182.2 129 64.3
MD07G1302900 Malus domestica HOM05D005446 ORTHO05D006597 1.7e-42 176.4 153 56.9
TAR362G0055 Trochodendron aralioides HOM05D005446 ORTHO05D006597 1.0e-39 167.2 114 69.3
PGR142G4477 Punica granatum HOM05D005446 ORTHO05D006597 2.3e-39 166.0 153 54.2
Sc13g0010680 Simmondsia chinensis HOM05D005446 ORTHO05D006597 5.1e-39 164.9 99 75.8
Psat2g060440 Pisum sativum HOM05D005446 ORTHO05D006597 1.5e-38 163.3 146 54.8
Ciclev10023849m.g Citrus clementina HOM05D005446 ORTHO05D006597 6.9e-36 154.5 103 68.0
FAN10G3034 Fragaria x ananassa HOM05D005446 ORTHO05D006597 6.4e-34 147.9 104 66.3
SEGI_01150 Sequoiadendron giganteum HOM05D005446 ORTHO05D006597 1.4e-33 146.7 143 47.6
arahy.Tifrunner.gnm1.ann1.PTVQ9K Arachis hypogaea HOM05D005446 ORTHO05D006597 3.5e-32 142.1 106 58.5
arahy.Tifrunner.gnm1.ann1.G1Q0KH Arachis hypogaea HOM05D005446 ORTHO05D006597 4.6e-32 141.7 106 59.4
QL09p006020 Quercus lobata HOM05D005446 ORTHO05D006597 4.6e-32 141.7 90 72.2
Oeu055421.1 Olea europaea HOM05D005446 ORTHO05D006597 2.3e-31 139.4 109 64.2
CDE05G0789 Ceratophyllum demersum HOM05D002553 ORTHO05D002767 5.3e-28 128.3 147 49.0
Pp3c14_9250 Physcomitrium patens HOM05D005446 ORTHO05D006597 1.7e-26 123.2 151 43.7
AagrBONN_evm.TU.Sc2ySwM_117.1519 Anthoceros agrestis HOM05D005446 ORTHO05D006597 5.5e-25 118.2 122 48.4
QL09p006057 Quercus lobata HOM05D000605 ORTHO05D001937 2.3e-23 112.8 82 64.6
Mapoly0096s0024 Marchantia polymorpha HOM05D005446 ORTHO05D006597 4.3e-22 108.6 134 41.8
TPR.G27917 Trifolium pratense HOM05D005446 ORTHO05D006597 8.2e-21 104.4 150 40.7
SMO356G0648 Selaginella moellendorffii HOM05D005446 ORTHO05D006597 1.3e-18 97.1 153 35.3
Cre01.g026100 Chlamydomonas reinhardtii HOM05D005446 ORTHO05D006597 9.3e-17 90.9 116 40.5
Phvul.003G000382 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 1.0e-15 87.4 61 67.2
Phvul.L006525 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 1.0e-15 87.4 61 67.2
Psat2g148960 Pisum sativum HOM05D005446 ORTHO05D006597 1.3e-15 87.0 50 74.0
MCO15G566 Micromonas commoda HOM05D005446 ORTHO05D006597 1.3e-13 80.5 118 33.9
Phvul.L004350 Phaseolus vulgaris HOM05D005446 ORTHO05D006597 2.8e-13 79.3 66 62.1
MELO3C018158.2 Cucumis melo HOM05D005446 ORTHO05D006597 1.8e-12 76.6 66 59.1


User provided reference genes

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