Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007998 Daucus carota HOM05D001439 ORTHO05D005279 8.4e-166 587.0 314 100.0
Gohir.A06G211700 Gossypium hirsutum HOM05D001439 ORTHO05D002726 1.0e-09 68.6 68 51.5
Manes.17G049300 Manihot esculenta HOM05D001439 ORTHO05D002726 1.0e-09 68.6 78 47.4
Cfa000527 Carpinus fangiana HOM05D001439 ORTHO05D002726 1.7e-09 67.8 70 51.4
CiPaw.09G063400 Carya illinoinensis HOM05D001439 ORTHO05D002726 1.7e-09 67.8 69 52.2
Haze_06382 Corylus avellana HOM05D001439 ORTHO05D002726 1.7e-09 67.8 70 51.4
Duzib235G0176 Durio zibethinus HOM05D001439 ORTHO05D002726 1.7e-09 67.8 93 40.9
Gorai.010G243500 Gossypium raimondii HOM05D001439 ORTHO05D002726 2.2e-09 67.4 80 45.0
Lj6g0010323 Lotus japonicus HOM05D001439 ORTHO05D002726 2.2e-09 67.4 78 47.4
Gohir.D06G209500 Gossypium hirsutum HOM05D001439 ORTHO05D002726 2.9e-09 67.0 80 45.0
Gohir.A06G211600 Gossypium hirsutum HOM05D001439 ORTHO05D002726 5.0e-09 66.2 93 38.7
Gohir.D06G209600 Gossypium hirsutum HOM05D001439 ORTHO05D002726 5.0e-09 66.2 93 38.7
Gorai.010G256900 Gossypium raimondii HOM05D001439 ORTHO05D002726 5.0e-09 66.2 93 38.7
Phvul.006G182000 Phaseolus vulgaris HOM05D001439 ORTHO05D002726 5.0e-09 66.2 80 45.0
Thecc.06G181000 Theobroma cacao HOM05D001439 ORTHO05D002726 6.5e-09 65.9 79 48.1
TPR.G11655 Trifolium pratense HOM05D001439 ORTHO05D002726 6.5e-09 65.9 69 50.7
Glyma.13G235300 Glycine max HOM05D001439 ORTHO05D002726 1.1e-08 65.1 80 45.0
Psat1g202960 Pisum sativum HOM05D001439 ORTHO05D002726 1.1e-08 65.1 155 35.5
Oeu056520.3 Olea europaea HOM05D001439 ORTHO05D002726 1.5e-08 64.7 83 48.2
Sabra04G0030600 Salix brachista HOM05D001439 ORTHO05D002726 1.5e-08 64.7 85 44.7
Sed0000156 Sechium edule HOM05D001439 ORTHO05D002726 1.5e-08 64.7 71 53.5
VMungo0540G1437 Vigna mungo HOM05D001439 ORTHO05D002726 1.5e-08 64.7 80 43.8
Atru.chr10.1798 Acer truncatum HOM05D001439 ORTHO05D002726 1.9e-08 64.3 82 46.3
Ca_00363_v3 Cicer arietinum L. HOM05D001439 ORTHO05D002726 1.9e-08 64.3 68 50.0
Potri.004G048675 Populus trichocarpa HOM05D001439 ORTHO05D002726 1.9e-08 64.3 65 50.8
Cpa.g.sc27.2 Carica papaya HOM05D001439 ORTHO05D002726 2.5e-08 63.9 67 49.3
ClCG01G023260 Citrullus lanatus HOM05D001439 ORTHO05D002726 2.5e-08 63.9 69 50.7
MD05G1310200 Malus domestica HOM05D001439 ORTHO05D002726 2.5e-08 63.9 80 46.2
Medtr2g014490 Medicago truncatula HOM05D001439 ORTHO05D002726 2.5e-08 63.9 80 46.2
PGR004G2384 Punica granatum HOM05D001439 ORTHO05D002726 2.5e-08 63.9 69 47.8
THA.LOC104812616 Tarenaya hassleriana HOM05D001439 ORTHO05D002726 2.5e-08 63.9 74 44.6
arahy.Tifrunner.gnm1.ann1.1H2VR5 Arachis hypogaea HOM05D001439 ORTHO05D002726 3.2e-08 63.5 85 42.4
arahy.Tifrunner.gnm1.ann1.49JRJ0 Arachis hypogaea HOM05D001439 ORTHO05D002726 3.2e-08 63.5 85 42.4
arahy.Tifrunner.gnm1.ann1.DG2K05 Arachis hypogaea HOM05D001439 ORTHO05D002726 3.2e-08 63.5 78 44.9
arahy.Tifrunner.gnm1.ann1.P48F6M Arachis hypogaea HOM05D001439 ORTHO05D002726 3.2e-08 63.5 78 44.9
MELO3C007260.2 Cucumis melo HOM05D001439 ORTHO05D002726 3.2e-08 63.5 68 51.5
CsaV3_6G050410 Cucumis sativus L. HOM05D001439 ORTHO05D002726 3.2e-08 63.5 68 51.5
Glyma.07G201200 Glycine max HOM05D001439 ORTHO05D002726 3.2e-08 63.5 77 45.5
THA.LOC104814231 Tarenaya hassleriana HOM05D001439 ORTHO05D002726 3.2e-08 63.5 67 47.8
Glyma.13G175200 Glycine max HOM05D001439 ORTHO05D002726 5.5e-08 62.8 65 49.2
QL05p042276 Quercus lobata HOM05D001439 ORTHO05D002726 5.5e-08 62.8 67 50.7
QL05p042429 Quercus lobata HOM05D001439 ORTHO05D002726 5.5e-08 62.8 67 50.7
AT1G28420 Arabidopsis thaliana HOM05D001439 ORTHO05D002726 7.2e-08 62.4 80 45.0
MD10G1289100 Malus domestica HOM05D001439 ORTHO05D002726 7.2e-08 62.4 81 44.4
Prupe.4G052600 Prunus persica HOM05D001439 ORTHO05D002726 7.2e-08 62.4 79 45.6
Ca_18589_v3 Cicer arietinum L. HOM05D001439 ORTHO05D002726 9.4e-08 62.0 77 45.5
Eucgr.D00596 Eucalyptus grandis HOM05D001439 ORTHO05D002726 9.4e-08 62.0 73 46.6
Lalb_Chr20g0121581 Lupinus albus HOM05D001439 ORTHO05D002726 9.4e-08 62.0 89 42.7
CANSAT64G0141 Cannabis sativa HOM05D001439 ORTHO05D002726 1.2e-07 61.6 89 41.6
TPR.G19912 Trifolium pratense HOM05D001439 ORTHO05D002726 1.2e-07 61.6 76 46.1
CSS0016347 Camellia sinensis var. sinensis HOM05D001439 ORTHO05D002726 1.6e-07 61.2 73 47.9
CSS0047003 Camellia sinensis var. sinensis HOM05D001439 ORTHO05D002726 1.6e-07 61.2 73 47.9
Cc05_g07750 Coffea canephora HOM05D001439 ORTHO05D002726 1.6e-07 61.2 80 45.0
FAN16G2831 Fragaria x ananassa HOM05D001439 ORTHO05D002726 1.6e-07 61.2 62 53.2
Phvul.002G232200 Phaseolus vulgaris HOM05D001439 ORTHO05D002726 1.6e-07 61.2 77 44.2
SGA_v2.0_scaffold22G09664 Striga asiatica HOM05D001439 ORTHO05D002726 1.6e-07 61.2 76 46.1
TWI23G0951 Tripterygium wilfordii HOM05D001439 ORTHO05D002726 1.6e-07 61.2 67 47.8
VMungo0251G2748 Vigna mungo HOM05D001439 ORTHO05D002726 1.6e-07 61.2 77 44.2
Migut.M01107 Erythranthe guttata HOM05D001439 ORTHO05D002726 2.1e-07 60.8 122 36.9
FAN21G0276 Fragaria x ananassa HOM05D001439 ORTHO05D002726 2.1e-07 60.8 62 53.2
PSO210G6356 Papaver somniferum HOM05D001439 ORTHO05D002726 2.1e-07 60.8 67 47.8
PSO832G3479 Papaver somniferum HOM05D001439 ORTHO05D002726 2.1e-07 60.8 67 47.8
Psat7g116080 Pisum sativum HOM05D001439 ORTHO05D002726 2.1e-07 60.8 61 52.5
TWI38G1950 Tripterygium wilfordii HOM05D001439 ORTHO05D002726 2.1e-07 60.8 80 42.5
FvH4_3g08620 Fragaria vesca HOM05D001439 ORTHO05D002726 2.7e-07 60.5 58 53.4
FAN11G1486 Fragaria x ananassa HOM05D001439 ORTHO05D002726 2.7e-07 60.5 58 53.4
FAN25G1066 Fragaria x ananassa HOM05D001439 ORTHO05D002726 2.7e-07 60.5 58 53.4
Lalb_Chr15g0089681 Lupinus albus HOM05D001439 ORTHO05D002726 2.7e-07 60.5 81 43.2
Sed0010792 Sechium edule HOM05D001439 ORTHO05D002726 2.7e-07 60.5 74 44.6
TWI14G1311 Tripterygium wilfordii HOM05D001439 ORTHO05D002726 2.7e-07 60.5 67 47.8
TAR626G0121 Trochodendron aralioides HOM05D001439 ORTHO05D002726 2.7e-07 60.5 71 47.9
Ciclev10014023m.g Citrus clementina HOM05D001439 ORTHO05D002726 3.6e-07 60.1 70 47.1
DCAR_028055 Daucus carota HOM05D001439 ORTHO05D002726 3.6e-07 60.1 72 45.8
HanXRQChr04g0117141 Helianthus annuus HOM05D001439 ORTHO05D002726 3.6e-07 60.1 101 39.6
Lj4g0015660 Lotus japonicus HOM05D001439 ORTHO05D002726 3.6e-07 60.1 65 49.2
Nn1g04237 Nelumbo nucifera HOM05D001439 ORTHO05D002726 3.6e-07 60.1 66 48.5
Actinidia07602 Actinidia chinensis HOM05D001439 ORTHO05D002726 4.7e-07 59.7 82 41.5
CANSAT35G2047 Cannabis sativa HOM05D001439 ORTHO05D002726 4.7e-07 59.7 81 40.7
Duzib160G0499 Durio zibethinus HOM05D001439 ORTHO05D002726 4.7e-07 59.7 93 38.7
Nn1g06413 Nelumbo nucifera HOM05D001439 ORTHO05D002726 4.7e-07 59.7 78 46.2
Hund07444 Selenicereus undatus HOM05D004808 ORTHO05D005279 4.7e-07 59.7 76 43.4
TWI38G1102 Tripterygium wilfordii HOM05D001439 ORTHO05D002726 4.7e-07 59.7 80 42.5
Lalb_Chr16g0384011 Lupinus albus HOM05D001439 ORTHO05D002726 6.1e-07 59.3 94 42.6
THA.LOC104801160 Tarenaya hassleriana HOM05D001439 ORTHO05D002726 6.1e-07 59.3 80 40.0
AL1G42050 Arabidopsis lyrata HOM05D001439 ORTHO05D002726 8.0e-07 58.9 182 31.3
Hma1.2p1_0558F.1_g178470 Hydrangea macrophylla HOM05D001439 ORTHO05D002726 8.0e-07 58.9 74 43.2
RcHm_v2.0_Chr2g0127081 Rosa chinensis HOM05D001439 ORTHO05D002726 8.0e-07 58.9 80 46.2
Sabra11G0039900 Salix brachista HOM05D001439 ORTHO05D002726 8.0e-07 58.9 74 41.9
TAR627G0298 Trochodendron aralioides HOM05D001439 ORTHO05D002726 8.0e-07 58.9 73 46.6
GSVIVG01021113001 Vitis vinifera HOM05D001439 ORTHO05D002726 8.0e-07 58.9 81 42.0
Actinidia11112 Actinidia chinensis HOM05D001439 ORTHO05D002726 1.0e-06 58.5 67 47.8
MSTRG.7359 Avicennia marina HOM05D001439 ORTHO05D002726 1.0e-06 58.5 116 37.1
Carub.0001s2690 Capsella rubella HOM05D001439 ORTHO05D002726 1.0e-06 58.5 66 45.5
FvH4_6g26700 Fragaria vesca HOM05D001439 ORTHO05D002726 1.0e-06 58.5 65 49.2
FAN05G3838 Fragaria x ananassa HOM05D001439 ORTHO05D002726 1.0e-06 58.5 65 49.2
FAN09G0796 Fragaria x ananassa HOM05D001439 ORTHO05D002726 1.0e-06 58.5 63 47.6
Gohir.D12G143800 Gossypium hirsutum HOM05D001439 ORTHO05D002726 1.0e-06 58.5 88 38.6
Gorai.008G155100 Gossypium raimondii HOM05D001439 ORTHO05D002726 1.0e-06 58.5 88 38.6
HanXRQChr15g0481491 Helianthus annuus HOM05D001439 ORTHO05D005279 1.0e-06 58.5 146 35.6
Sp2g09000 Schrenkiella parvula HOM05D001439 ORTHO05D002726 1.0e-06 58.5 74 45.9
HanXRQChr03g0072381 Helianthus annuus HOM05D001439 ORTHO05D005279 1.4e-06 58.2 126 38.9
Lj2C292T8 Lonicera japonica HOM05D001439 ORTHO05D002726 1.4e-06 58.2 63 49.2
Lalb_Chr18g0059381 Lupinus albus HOM05D001439 ORTHO05D002726 1.4e-06 58.2 68 45.6
Hund01014 Selenicereus undatus HOM05D001439 ORTHO05D002726 1.4e-06 58.2 68 48.5
Solyc07g053610.3 Solanum lycopersicum HOM05D001439 ORTHO05D002726 1.4e-06 58.2 92 40.2
Sopen07g027560 Solanum pennellii HOM05D001439 ORTHO05D002726 1.4e-06 58.2 92 40.2
TAR636G2671 Trochodendron aralioides HOM05D004808 ORTHO05D005279 1.4e-06 58.2 67 46.3
arahy.Tifrunner.gnm1.ann1.31J8XM Arachis hypogaea HOM05D001439 ORTHO05D002726 1.8e-06 57.8 61 47.5
arahy.Tifrunner.gnm1.ann1.G6BTL7 Arachis hypogaea HOM05D001439 ORTHO05D002726 1.8e-06 57.8 61 47.5
Carub.0008s0434 Capsella rubella HOM05D001439 ORTHO05D002726 1.8e-06 57.8 79 41.8
Ciclev10014022m.g Citrus clementina HOM05D001439 ORTHO05D002726 1.8e-06 57.8 66 47.0
DCAR_004044 Daucus carota HOM05D001439 ORTHO05D002726 1.8e-06 57.8 232 28.9
Dinv17354 Davidia involucrata HOM05D001439 ORTHO05D002726 1.8e-06 57.8 81 42.0
Nitab4.5_0001955g0100 Nicotiana tabacum HOM05D001439 ORTHO05D002726 1.8e-06 57.8 106 35.8
RcHm_v2.0_Chr5g0009221 Rosa chinensis HOM05D001439 ORTHO05D002726 1.8e-06 57.8 70 47.1
Sp1g24700 Schrenkiella parvula HOM05D001439 ORTHO05D002726 1.8e-06 57.8 67 44.8
TPR.G9356 Trifolium pratense HOM05D001439 ORTHO05D002726 1.8e-06 57.8 61 49.2
BcaC01g00060 Brassica carinata HOM05D001439 ORTHO05D002726 2.3e-06 57.4 67 43.3
BolC3t19784H Brassica oleracea HOM05D001439 ORTHO05D002726 2.3e-06 57.4 67 43.3
Cpa.g.sc83.97 Carica papaya HOM05D001439 ORTHO05D002726 2.3e-06 57.4 75 45.3
Cfa002900 Carpinus fangiana HOM05D001439 ORTHO05D005279 2.3e-06 57.4 76 43.4
Migut.H01470 Erythranthe guttata HOM05D001439 ORTHO05D002726 2.3e-06 57.4 87 44.8
Nn7g37333 Nelumbo nucifera HOM05D004808 ORTHO05D005279 2.3e-06 57.4 68 47.1
HPP92_023278 Vanilla planifolia HOM05D001439 ORTHO05D002726 2.3e-06 57.4 67 44.8
Aqoxy2G00360 Aquilegia oxysepala HOM05D004808 ORTHO05D005279 3.0e-06 57.0 65 44.6
MSTRG.14322 Avicennia marina HOM05D001439 ORTHO05D002726 3.0e-06 57.0 82 37.8
FAN02G3093 Fragaria x ananassa HOM05D001439 ORTHO05D002726 3.0e-06 57.0 65 47.7
Peaxi162Scf00926g00006 Petunia axillaris HOM05D001439 ORTHO05D002726 3.0e-06 57.0 109 36.7
ATR0745G080 Amborella trichopoda HOM05D004808 ORTHO05D005279 4.0e-06 56.6 115 33.0
Aqoxy4G00628 Aquilegia oxysepala HOM05D001439 ORTHO05D002726 4.0e-06 56.6 69 43.5
CiPaw.03G181600 Carya illinoinensis HOM05D001439 ORTHO05D002726 4.0e-06 56.6 76 43.4
DCAR_021265 Daucus carota HOM05D001439 ORTHO05D002726 4.0e-06 56.6 68 45.6
Dinv06859 Davidia involucrata HOM05D001439 ORTHO05D002726 4.0e-06 56.6 67 46.3
Glyma.06G288900 Glycine max HOM05D001439 ORTHO05D002726 4.0e-06 56.6 59 52.5
Medtr4g078860 Medicago truncatula HOM05D001439 ORTHO05D002726 4.0e-06 56.6 60 51.7
Nitab4.5_0004359g0020 Nicotiana tabacum HOM05D001439 ORTHO05D002726 4.0e-06 56.6 95 36.8
Sc09g0000980 Simmondsia chinensis HOM05D004808 ORTHO05D005279 4.0e-06 56.6 66 43.9
Aa31LG6G10940 Aethionema arabicum HOM05D001439 ORTHO05D002726 5.2e-06 56.2 90 38.9
BcaC05g26861 Brassica carinata HOM05D001439 ORTHO05D002726 5.2e-06 56.2 69 43.5
BcaC06g34584 Brassica carinata HOM05D001439 ORTHO05D002726 5.2e-06 56.2 81 42.0
C07p26860 Brassica napus HOM05D001439 ORTHO05D002726 5.2e-06 56.2 81 42.0
BolC7t43215H Brassica oleracea HOM05D001439 ORTHO05D002726 5.2e-06 56.2 81 42.0
CSS0043150 Camellia sinensis var. sinensis HOM05D001439 ORTHO05D002726 5.2e-06 56.2 104 38.5
Eucgr.K01058 Eucalyptus grandis HOM05D001439 ORTHO05D002726 5.2e-06 56.2 68 47.1
Thhalv10006543m.g Eutrema salsugineum HOM05D001439 ORTHO05D002726 5.2e-06 56.2 64 45.3
HanXRQChr15g0469531 Helianthus annuus HOM05D001439 ORTHO05D002726 5.2e-06 56.2 76 42.1
Mapoly0005s0159 Marchantia polymorpha HOM05D001439 ORTHO05D002726 5.2e-06 56.2 75 44.0
Medtr4g088375 Medicago truncatula HOM05D001439 ORTHO05D002726 5.2e-06 56.2 121 38.0
QL08p040227 Quercus lobata HOM05D001439 ORTHO05D002726 5.2e-06 56.2 130 34.6
QL08p040265 Quercus lobata HOM05D001439 ORTHO05D002726 5.2e-06 56.2 130 34.6
unitig_37.g12875 Utricularia gibba HOM05D001439 ORTHO05D002726 5.2e-06 56.2 79 39.2
unitig_699.g19143 Utricularia gibba HOM05D004808 ORTHO05D005279 5.2e-06 56.2 72 48.6
GSVIVG01037260001 Vitis vinifera HOM05D004808 ORTHO05D005279 5.2e-06 56.2 67 41.8
Aa31LG5G3060 Aethionema arabicum HOM05D001439 ORTHO05D002726 6.7e-06 55.8 70 45.7
A08p25510 Brassica napus HOM05D001439 ORTHO05D002726 6.7e-06 55.8 64 43.8
BraA08t34505Z Brassica rapa HOM05D001439 ORTHO05D002726 6.7e-06 55.8 67 41.8
CAN.G529.57 Capsicum annuum HOM05D001439 ORTHO05D002726 6.7e-06 55.8 93 38.7
Duzib132G0536 Durio zibethinus HOM05D001439 ORTHO05D002726 6.7e-06 55.8 69 44.9
Lsat_1_v5_gn_7_22781 Lactuca sativa HOM05D001439 ORTHO05D002726 6.7e-06 55.8 87 40.2
Psat7g167560 Pisum sativum HOM05D001439 ORTHO05D002726 6.7e-06 55.8 61 49.2
Potri.011G057700 Populus trichocarpa HOM05D001439 ORTHO05D002726 6.7e-06 55.8 70 41.4
Thecc.02G186300 Theobroma cacao HOM05D001439 ORTHO05D002726 6.7e-06 55.8 89 37.1
GSVIVG01020605001 Vitis vinifera HOM05D001439 ORTHO05D002726 6.7e-06 55.8 144 34.0
Zm00001eb359990 Zea mays HOM05D001439 ORTHO05D002726 6.7e-06 55.8 82 41.5
Atru.chr6.2869 Acer truncatum HOM05D001439 ORTHO05D002726 8.8e-06 55.5 69 43.5
BcaB03g12103 Brassica carinata HOM05D001439 ORTHO05D002726 8.8e-06 55.5 68 41.2
CARHR027930 Cardamine hirsuta HOM05D001439 ORTHO05D002726 8.8e-06 55.5 190 29.5
ClCG02G022910 Citrullus lanatus HOM05D004808 ORTHO05D005279 8.8e-06 55.5 67 43.3
MELO3C014565.2 Cucumis melo HOM05D004808 ORTHO05D005279 8.8e-06 55.5 67 43.3
FAN14G5737 Fragaria x ananassa HOM05D001439 ORTHO05D002726 8.8e-06 55.5 60 50.0
Lj3g0019816 Lotus japonicus HOM05D001439 ORTHO05D002726 8.8e-06 55.5 77 41.6
SMO337G0095 Selaginella moellendorffii HOM05D001439 ORTHO05D002726 8.8e-06 55.5 69 43.5
Hund07869 Selenicereus undatus HOM05D001439 ORTHO05D002726 8.8e-06 55.5 69 46.4
Solyc02g077660.3 Solanum lycopersicum HOM05D001439 ORTHO05D002726 8.8e-06 55.5 120 34.2
Sopen02g022560 Solanum pennellii HOM05D001439 ORTHO05D002726 8.8e-06 55.5 120 34.2
SGA_v2.0_scaffold34G13921 Striga asiatica HOM05D001439 ORTHO05D002726 8.8e-06 55.5 68 47.1
vmacro04022 Vaccinium macrocarpon HOM05D004808 ORTHO05D005279 8.8e-06 55.5 68 42.6
HPP92_023235 Vanilla planifolia HOM05D001439 ORTHO05D002726 8.8e-06 55.5 64 45.3
Zm00001eb157230 Zea mays HOM05D001439 ORTHO05D005279 8.8e-06 55.5 63 44.4


User provided reference genes

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