Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007807 Daucus carota HOM05D004135 ORTHO05D005558 6.2e-163 577.4 293 100.0
DCAR_003828 Daucus carota HOM05D004135 ORTHO05D005558 4.9e-152 541.2 292 94.5
MELO3C007042.2 Cucumis melo HOM05D004135 ORTHO05D005558 3.4e-137 491.9 293 84.6
Lj1A1156T44 Lonicera japonica HOM05D004135 ORTHO05D005558 3.4e-137 491.9 303 82.8
ClCG01G025420 Citrullus lanatus HOM05D004135 ORTHO05D005558 5.0e-136 488.0 293 83.6
Hma1.2p1_0300F.1_g117980 Hydrangea macrophylla HOM05D004135 ORTHO05D005558 5.0e-136 488.0 293 84.3
Cfa000762 Carpinus fangiana HOM05D004135 ORTHO05D005558 1.1e-135 486.9 292 83.6
CsaV3_6G052670 Cucumis sativus L. HOM05D004135 ORTHO05D005558 3.2e-135 485.3 293 83.3
GSVIVG01021747001 Vitis vinifera HOM05D004135 ORTHO05D005558 3.2e-135 485.3 293 84.3
Sed0027064 Sechium edule HOM05D004135 ORTHO05D005558 9.4e-135 483.8 293 82.9
Oeu060331.1 Olea europaea HOM05D004135 ORTHO05D005558 2.1e-134 482.6 290 84.5
QL05p064858 Quercus lobata HOM05D004135 ORTHO05D005558 2.7e-134 482.3 291 83.2
Sed0006315 Sechium edule HOM05D004135 ORTHO05D005558 2.7e-134 482.3 293 82.6
Lj2A337T32 Lonicera japonica HOM05D004135 ORTHO05D005558 3.6e-134 481.9 293 83.6
CiPaw.09G148400 Carya illinoinensis HOM05D004135 ORTHO05D005558 7.9e-134 480.7 292 82.2
Eucgr.D01026 Eucalyptus grandis HOM05D004135 ORTHO05D005558 3.0e-133 478.8 293 81.2
Manes.06G053900 Manihot esculenta HOM05D004135 ORTHO05D005558 5.1e-133 478.0 293 83.3
Sc24g0002580 Simmondsia chinensis HOM05D004135 ORTHO05D005558 1.1e-132 476.9 293 82.9
TAR629G2923 Trochodendron aralioides HOM05D004135 ORTHO05D005558 1.1e-132 476.9 293 82.9
Cpa.g.sc285.5 Carica papaya HOM05D004135 ORTHO05D005558 1.5e-132 476.5 292 82.9
Peaxi162Scf00195g00518 Petunia axillaris HOM05D004135 ORTHO05D005558 2.0e-132 476.1 293 81.9
Migut.M01941 Erythranthe guttata HOM05D004135 ORTHO05D005558 7.4e-132 474.2 290 83.4
Gohir.A05G111900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 7.4e-132 474.2 291 81.8
Lsat_1_v5_gn_1_86700 Lactuca sativa HOM05D004135 ORTHO05D005558 2.8e-131 472.2 289 82.7
Nitab4.5_0012414g0010 Nicotiana tabacum HOM05D004135 ORTHO05D005558 3.7e-131 471.9 292 80.8
Potri.011G155800 Populus trichocarpa HOM05D004135 ORTHO05D005558 3.7e-131 471.9 291 82.8
TAR627G0684 Trochodendron aralioides HOM05D004135 ORTHO05D005558 3.7e-131 471.9 293 82.3
CANSAT35G0477 Cannabis sativa HOM05D004135 ORTHO05D005558 4.8e-131 471.5 292 80.1
HanXRQChr11g0340901 Helianthus annuus HOM05D004135 ORTHO05D005558 4.8e-131 471.5 288 81.6
Nitab4.5_0001219g0030 Nicotiana tabacum HOM05D004135 ORTHO05D005558 4.8e-131 471.5 292 80.8
MSTRG.16319 Avicennia marina HOM05D004135 ORTHO05D005558 8.2e-131 470.7 292 81.5
PSO541G2415 Papaver somniferum HOM05D004135 ORTHO05D005558 8.2e-131 470.7 293 82.3
SalBow8G1631 Salvia bowleyana HOM05D004135 ORTHO05D005558 8.2e-131 470.7 290 82.1
SalBow8G2729 Salvia bowleyana HOM05D004135 ORTHO05D005558 8.2e-131 470.7 290 82.1
Manes.14G126900 Manihot esculenta HOM05D004135 ORTHO05D005558 1.1e-130 470.3 293 82.6
Sopen02g009560 Solanum pennellii HOM05D004135 ORTHO05D005558 1.1e-130 470.3 290 82.8
CAN.G675.30 Capsicum annuum HOM05D004135 ORTHO05D005558 1.8e-130 469.5 292 81.2
THA.LOC104798582 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 3.1e-130 468.8 292 80.1
THA.LOC104814339 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 3.1e-130 468.8 292 80.8
vmacro03457 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 4.1e-130 468.4 306 77.5
Ciclev10016127m.g Citrus clementina HOM05D004135 ORTHO05D005558 5.3e-130 468.0 292 81.2
Solyc02g030243.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 6.9e-130 467.6 290 82.4
Solyc02g069585.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 6.9e-130 467.6 293 79.9
AUR62027344 Chenopodium quinoa HOM05D004135 ORTHO05D005558 9.1e-130 467.2 293 78.8
MSTRG.7569 Avicennia marina HOM05D004135 ORTHO05D005558 1.2e-129 466.8 292 81.2
PSO675G0864 Papaver somniferum HOM05D004135 ORTHO05D005558 1.2e-129 466.8 293 81.9
PGR083G2348 Punica granatum HOM05D004135 ORTHO05D005558 1.2e-129 466.8 292 80.1
Sopen02g018720 Solanum pennellii HOM05D004135 ORTHO05D005558 1.2e-129 466.8 293 79.9
PGSC0003DMG400031401 Solanum tuberosum HOM05D004135 ORTHO05D005558 1.5e-129 466.5 290 82.1
AL1G44690 Arabidopsis lyrata HOM05D004135 ORTHO05D005558 7.7e-129 464.2 293 77.8
EL10Ac8g19524 Beta vulgaris HOM05D004135 ORTHO05D005558 7.7e-129 464.2 293 79.9
Aa31LG10G6460 Aethionema arabicum HOM05D004135 ORTHO05D005558 1.0e-128 463.8 292 80.5
Aa31LG6G11870 Aethionema arabicum HOM05D004135 ORTHO05D005558 1.0e-128 463.8 292 79.5
AUR62042515 Chenopodium quinoa HOM05D004135 ORTHO05D005558 1.0e-128 463.8 293 78.2
Gorai.005G119100 Gossypium raimondii HOM05D004135 ORTHO05D005558 1.3e-128 463.4 292 79.5
PGSC0003DMG400021137 Solanum tuberosum HOM05D004135 ORTHO05D005558 1.7e-128 463.0 292 79.5
Gohir.D02G104900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 3.8e-128 461.8 292 79.1
Gohir.A02G088700 Gossypium hirsutum HOM05D004135 ORTHO05D005558 1.4e-127 459.9 292 79.1
AT1G30630 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 2.5e-127 459.1 293 77.5
HanXRQChr04g0119201 Helianthus annuus HOM05D004135 ORTHO05D005558 2.5e-127 459.1 288 80.6
BcaB06g28829 Brassica carinata HOM05D004135 ORTHO05D005558 4.2e-127 458.4 292 78.4
Carub.0001s2889 Capsella rubella HOM05D004135 ORTHO05D005558 9.4e-127 457.2 293 77.5
Aqoxy6G00202 Aquilegia oxysepala HOM05D004135 ORTHO05D005558 1.2e-126 456.8 293 79.2
BcaC01g05751 Brassica carinata HOM05D004135 ORTHO05D005558 1.2e-126 456.8 292 78.1
C03p22580 Brassica napus HOM05D004135 ORTHO05D005558 1.2e-126 456.8 292 78.1
CSS0034299 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D005558 1.2e-126 456.8 306 77.5
SGA_v2.0_scaffold298G47640 Striga asiatica HOM05D004135 ORTHO05D005558 1.2e-126 456.8 325 74.8
unitig_748.g7354 Utricularia gibba HOM05D004135 ORTHO05D005558 1.6e-126 456.4 290 79.3
Duzib235G1539 Durio zibethinus HOM05D004135 ORTHO05D005558 2.1e-126 456.1 292 79.1
BolC3t14655H Brassica oleracea HOM05D004135 ORTHO05D005558 2.7e-126 455.7 292 78.4
Nn7g38349 Nelumbo nucifera HOM05D004135 ORTHO05D005558 2.7e-126 455.7 293 80.5
Prupe.4G101800 Prunus persica HOM05D004135 ORTHO05D005558 2.7e-126 455.7 292 78.8
BraA04t18166Z Brassica rapa HOM05D004135 ORTHO05D005558 3.6e-126 455.3 292 78.4
ATR0763G246 Amborella trichopoda HOM05D004135 ORTHO05D005558 4.7e-126 454.9 293 78.5
CDE02G1412 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 4.7e-126 454.9 290 79.3
BraA03t11189Z Brassica rapa HOM05D004135 ORTHO05D005558 6.1e-126 454.5 292 77.4
Thhalv10017028m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 6.1e-126 454.5 292 79.1
Sp1g26530 Schrenkiella parvula HOM05D004135 ORTHO05D005558 6.1e-126 454.5 293 77.1
Thecc.06G007700 Theobroma cacao HOM05D004135 ORTHO05D005558 7.9e-126 454.1 292 79.1
A03p19330 Brassica napus HOM05D004135 ORTHO05D005558 2.3e-125 452.6 289 78.2
C04p64030 Brassica napus HOM05D004135 ORTHO05D005558 3.0e-125 452.2 292 77.7
Duzib160G0522 Durio zibethinus HOM05D004135 ORTHO05D005558 3.0e-125 452.2 292 78.1
A04p26610 Brassica napus HOM05D004135 ORTHO05D005558 3.9e-125 451.8 292 78.1
AT2G34840 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 5.1e-125 451.4 292 78.1
Gohir.D05G112400 Gossypium hirsutum HOM05D004135 ORTHO05D005558 5.1e-125 451.4 291 78.4
Sp4g17120 Schrenkiella parvula HOM05D004135 ORTHO05D005558 5.1e-125 451.4 292 78.1
Thhalv10008349m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 1.5e-124 449.9 292 76.4
BcaC02g07752 Brassica carinata HOM05D004135 ORTHO05D005558 2.0e-124 449.5 292 77.4
BolC4t27879H Brassica oleracea HOM05D004135 ORTHO05D005558 2.6e-124 449.1 292 77.4
Lsat_1_v5_gn_7_31180 Lactuca sativa HOM05D004135 ORTHO05D005558 3.3e-124 448.7 291 79.4
arahy.Tifrunner.gnm1.ann1.CJHC7K Arachis hypogaea HOM05D004135 ORTHO05D005558 4.4e-124 448.4 295 75.9
Gorai.009G116600 Gossypium raimondii HOM05D004135 ORTHO05D005558 4.4e-124 448.4 291 78.0
CARHR030110 Cardamine hirsuta HOM05D004135 ORTHO05D005558 5.7e-124 448.0 292 76.4
Carub.0004s1652 Capsella rubella HOM05D004135 ORTHO05D005558 1.3e-123 446.8 292 76.7
Lj6g0020585 Lotus japonicus HOM05D004135 ORTHO05D005558 1.7e-123 446.4 293 75.8
BcaB07g32703 Brassica carinata HOM05D004135 ORTHO05D005558 2.8e-123 445.7 292 75.3
TWI81G0788 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 2.8e-123 445.7 294 78.2
BcaC05g27087 Brassica carinata HOM05D004135 ORTHO05D005558 3.7e-123 445.3 292 75.0
C05p29690 Brassica napus HOM05D004135 ORTHO05D005558 3.7e-123 445.3 292 75.0
BolC5t31698H Brassica oleracea HOM05D004135 ORTHO05D005558 3.7e-123 445.3 292 75.0
A09p35780 Brassica napus HOM05D004135 ORTHO05D005558 4.8e-123 444.9 292 75.0
BraA09t39101Z Brassica rapa HOM05D004135 ORTHO05D005558 4.8e-123 444.9 292 75.0
HPP92_013200 Vanilla planifolia HOM05D004135 ORTHO05D005558 4.8e-123 444.9 291 77.3
Nn4g26687 Nelumbo nucifera HOM05D004135 ORTHO05D005558 6.3e-123 444.5 293 78.2
Ah.11g045310 Amaranthus hybridus HOM05D004135 ORTHO05D005558 8.2e-123 444.1 293 75.8
Phvul.006G122500 Phaseolus vulgaris HOM05D004135 ORTHO05D005558 1.1e-122 443.7 292 74.3
Zm00001eb430730 Zea mays HOM05D004135 ORTHO05D005558 2.4e-122 442.6 293 75.8
Sabra11G0144000 Salix brachista HOM05D004135 ORTHO05D005558 3.1e-122 442.2 304 75.3
vmacro10993 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 3.1e-122 442.2 449 56.8
Os04g0612600 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 4.1e-122 441.8 293 75.4
Glyma.15G136100 Glycine max HOM05D004135 ORTHO05D005558 5.3e-122 441.4 292 73.6
Actinidia31378 Actinidia chinensis HOM05D004135 ORTHO05D005558 9.1e-122 440.7 264 85.6
Lalb_Chr20g0120301 Lupinus albus HOM05D004135 ORTHO05D005558 1.5e-121 439.9 293 75.1
Actinidia32352 Actinidia chinensis HOM05D004135 ORTHO05D005558 3.5e-121 438.7 294 79.3
Ca_00931_v3 Cicer arietinum L. HOM05D004135 ORTHO05D005558 5.9e-121 438.0 293 74.7
Medtr2g032130 Medicago truncatula HOM05D004135 ORTHO05D005558 2.2e-120 436.0 290 74.1
Glyma.09G030400 Glycine max HOM05D004135 ORTHO05D005558 8.5e-120 434.1 292 72.3
MBI18_g26296_MAGBIO Magnolia biondii HOM05D004135 ORTHO05D005558 8.5e-120 434.1 308 73.1
TWI15G0841 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 1.1e-119 433.7 296 76.0
TWI38G0133 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 3.6e-118 428.7 296 75.3
FAN21G1456 Fragaria x ananassa HOM05D004135 ORTHO05D005558 3.3e-116 422.2 292 72.9
FAN25G0882 Fragaria x ananassa HOM05D004135 ORTHO05D005558 4.4e-116 421.8 292 72.6
RcHm_v2.0_Chr5g0018341 Rosa chinensis HOM05D004135 ORTHO05D005558 5.7e-116 421.4 293 74.7
FAN16G1287 Fragaria x ananassa HOM05D004135 ORTHO05D005558 9.7e-116 420.6 292 72.3
VMungo0540G1545 Vigna mungo HOM05D004135 ORTHO05D005558 6.3e-115 417.9 292 71.6
Atru.chr6.3256 Acer truncatum HOM05D004135 ORTHO05D005558 3.1e-114 415.6 295 73.6
FvH4_3g11400 Fragaria vesca HOM05D004135 ORTHO05D005558 5.3e-114 414.8 292 72.3
Oeu052702.4 Olea europaea HOM05D004135 ORTHO05D005558 7.0e-114 414.5 302 73.8
MD05G1263700 Malus domestica HOM05D004135 ORTHO05D005558 7.7e-113 411.0 289 72.3
ECA236G2122 Erigeron canadensis HOM05D000091 ORTHO05D001510 1.3e-112 410.2 274 77.0
Haze_08569 Corylus avellana HOM05D004135 ORTHO05D005558 2.2e-112 409.5 310 70.0
Dinv04216 Davidia involucrata HOM05D004135 ORTHO05D005558 2.2e-112 409.5 235 87.7
Pp3c27_2170 Physcomitrium patens HOM05D004135 ORTHO05D005558 1.2e-108 397.1 293 67.2
Zm00001eb432010 Zea mays HOM05D004135 ORTHO05D005558 1.2e-108 397.1 295 68.1
MD10G1241400 Malus domestica HOM05D004135 ORTHO05D005558 3.3e-108 395.6 286 69.6
Cc09_g07090 Coffea canephora HOM05D004135 ORTHO05D005558 6.3e-107 391.3 233 84.1
Psat1g164080 Pisum sativum HOM05D004135 ORTHO05D005558 1.8e-106 389.8 259 74.9
Pp3c16_16890 Physcomitrium patens HOM05D004135 ORTHO05D005558 2.4e-106 389.4 293 65.9
Pp3c6_18240 Physcomitrium patens HOM05D004135 ORTHO05D005558 3.1e-106 389.0 293 65.2
TPR.G8030 Trifolium pratense HOM05D004135 ORTHO05D005558 4.1e-106 388.7 259 73.7
Os04g0644700 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 3.8e-104 382.1 296 66.2
Mapoly0002s0056 Marchantia polymorpha HOM05D004135 ORTHO05D005558 6.8e-101 371.3 288 64.2
arahy.Tifrunner.gnm1.ann1.NB4WMM Arachis hypogaea HOM05D004135 ORTHO05D005558 8.3e-99 364.4 235 77.4
Rhsim02G0165800 Rhododendron simsii HOM05D004135 ORTHO05D005558 1.8e-98 363.2 301 65.4
AagrBONN_evm.TU.Sc2ySwM_117.3836 Anthoceros agrestis HOM05D004135 ORTHO05D005558 5.2e-93 345.1 292 61.0
Actinidia25200 Actinidia chinensis HOM05D004135 ORTHO05D005558 8.6e-88 327.8 205 82.0
SMO358G0532 Selaginella moellendorffii HOM05D004135 ORTHO05D005558 9.5e-87 324.3 287 58.9
COL.COLO4_26892 Corchorus olitorius HOM05D004135 ORTHO05D005558 2.3e-77 293.1 273 59.3
Cre13.g592450 Chlamydomonas reinhardtii HOM05D004135 ORTHO05D005558 3.7e-75 285.8 289 50.9
PRCOL_00001868 Prasinoderma coloniale HOM05D004135 ORTHO05D005558 1.5e-71 273.9 286 49.7
CBR_g34668 Chara braunii HOM05D004135 ORTHO05D005558 3.1e-69 266.2 288 50.0
MCO11G236 Micromonas commoda HOM05D004135 ORTHO05D005558 2.9e-67 259.6 288 47.2
CDE06G2577 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 1.7e-64 250.4 165 76.4
Haze_05958 Corylus avellana HOM05D006556 ORTHO05D008146 1.1e-55 221.1 153 72.5
Zm00001eb274480 Zea mays HOM05D004135 ORTHO05D005558 4.3e-55 219.2 156 67.3
Thecc.06G007200 Theobroma cacao HOM05D004135 ORTHO05D005558 2.2e-51 206.8 115 88.7
COL.COLO4_29004 Corchorus olitorius HOM05D004135 ORTHO05D005558 6.4e-51 205.3 127 79.5
Zm00001eb135420 Zea mays HOM05D004135 ORTHO05D443401 1.7e-27 127.5 82 79.3
SGA_v2.0_scaffold147G36337 Striga asiatica HOM05D004135 ORTHO05D401852 1.4e-21 107.8 125 50.4
SGA_v2.0_scaffold147G36336 Striga asiatica HOM05D004135 ORTHO05D000001 1.2e-20 104.8 156 42.9
Zm00001eb194710 Zea mays HOM05D004186 ORTHO05D006965 1.5e-20 104.4 95 62.1
RcHm_v2.0_Chr6g0289631 Rosa chinensis HOM05D004135 ORTHO05D008146 2.6e-20 103.6 66 77.3
Zm00001eb059010 Zea mays HOM05D004186 ORTHO05D006965 5.9e-20 102.4 95 62.1
AUR62011277 Chenopodium quinoa HOM05D004135 ORTHO05D138132 1.0e-19 101.7 54 90.7
Zm00001eb347580 Zea mays HOM05D004186 ORTHO05D006965 6.5e-19 99.0 95 61.1
Zm00001eb180170 Zea mays HOM05D004135 ORTHO05D444922 1.1e-18 98.2 75 65.3
CSS0024113 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D028393 6.1e-17 92.4 56 76.8
RcHm_v2.0_Chr6g0289621 Rosa chinensis HOM05D004135 ORTHO05D028393 6.7e-16 89.0 72 61.1
Zm00001eb388920 Zea mays HOM05D000787 ORTHO05D001019 2.8e-14 83.6 81 59.3
RcHm_v2.0_Chr0c29g0501101 Rosa chinensis HOM05D004135 ORTHO05D028393 6.9e-13 79.0 60 66.7
RcHm_v2.0_Chr1g0337861 Rosa chinensis HOM05D004135 ORTHO05D028393 6.9e-13 79.0 60 66.7
Zm00001eb297670 Zea mays HOM05D004958 ORTHO05D005983 1.0e-08 65.1 56 58.9
AUR62044460 Chenopodium quinoa HOM05D004135 ORTHO05D137931 2.2e-06 57.4 32 87.5
VMungo0540G1336 Vigna mungo HOM05D000328 ORTHO05D000191 2.2e-06 57.4 41 58.5


User provided reference genes

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