Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007600 Daucus carota HOM05D005962 ORTHO05D007325 2.3e-145 518.8 255 100.0
vmacro18833 Vaccinium macrocarpon HOM05D005962 ORTHO05D007325 5.7e-120 434.5 257 82.5
TAR623G1297 Trochodendron aralioides HOM05D005962 ORTHO05D007325 1.8e-118 429.5 260 81.2
Rhsim08G0229500 Rhododendron simsii HOM05D005962 ORTHO05D007325 5.3e-118 427.9 257 81.3
Oeu024256.1 Olea europaea HOM05D005962 ORTHO05D007325 1.9e-115 419.5 261 80.8
Rhsim08G0229700 Rhododendron simsii HOM05D005962 ORTHO05D007325 4.2e-115 418.3 270 77.0
Nn4g25123 Nelumbo nucifera HOM05D005962 ORTHO05D007325 3.6e-114 415.2 257 79.4
ECA248G1573 Erigeron canadensis HOM05D005962 ORTHO05D007325 3.3e-112 408.7 250 81.2
Actinidia32123 Actinidia chinensis HOM05D005962 ORTHO05D007325 7.4e-112 407.5 251 79.7
MBI01_g35895_MAGBIO Magnolia biondii HOM05D005962 ORTHO05D007325 5.3e-110 401.4 259 78.0
Solyc12g044640.2 Solanum lycopersicum HOM05D005962 ORTHO05D007325 2.0e-109 399.4 253 77.1
TWI12G1051 Tripterygium wilfordii HOM05D005962 ORTHO05D007325 2.6e-109 399.1 261 76.6
Hma1.2p1_0764F.1_g214960 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 2.2e-108 396.0 259 76.8
Nitab4.5_0002423g0030 Nicotiana tabacum HOM05D005962 ORTHO05D007325 2.9e-108 395.6 253 77.5
Hma1.2p1_2308F.1_g319480 Hydrangea macrophylla HOM05D005962 ORTHO05D007325 8.5e-108 394.0 259 76.4
PGSC0003DMG400026839 Solanum tuberosum HOM05D005962 ORTHO05D007325 2.5e-107 392.5 253 75.9
COL.COLO4_30547 Corchorus olitorius HOM05D005962 ORTHO05D007325 3.2e-107 392.1 258 75.6
Lsat_1_v5_gn_5_181040 Lactuca sativa HOM05D005962 ORTHO05D007325 3.2e-107 392.1 250 78.8
PGSC0003DMG401002516 Solanum tuberosum HOM05D005962 ORTHO05D007325 4.2e-107 391.7 253 74.7
Cc00_g23930 Coffea canephora HOM05D005962 ORTHO05D007325 9.4e-107 390.6 250 77.2
Dinv37956 Davidia involucrata HOM05D005962 ORTHO05D007325 1.6e-106 389.8 225 84.0
Thecc.06G103400 Theobroma cacao HOM05D005962 ORTHO05D007325 1.6e-106 389.8 259 75.3
Haze_15888 Corylus avellana HOM05D005962 ORTHO05D007325 2.1e-106 389.4 251 76.1
CSS0027495 Camellia sinensis var. sinensis HOM05D005962 ORTHO05D007325 2.7e-106 389.0 225 84.0
CAN.G1143.30 Capsicum annuum HOM05D005962 ORTHO05D007325 4.7e-106 388.3 231 79.7
Nitab4.5_0001172g0180 Nicotiana tabacum HOM05D005962 ORTHO05D007325 7.9e-106 387.5 254 76.0
Peaxi162Scf00038g01151 Petunia axillaris HOM05D005962 ORTHO05D007325 7.9e-106 387.5 253 74.3
Aqoxy2G04031 Aquilegia oxysepala HOM05D005962 ORTHO05D007325 1.4e-105 386.7 264 73.9
Gohir.D01G215700 Gossypium hirsutum HOM05D005962 ORTHO05D007325 1.4e-105 386.7 252 77.4
Glyma.08G199200 Glycine max HOM05D005962 ORTHO05D007325 1.8e-105 386.3 248 77.4
Gorai.002G261900 Gossypium raimondii HOM05D005962 ORTHO05D007325 1.8e-105 386.3 252 77.4
Sopen12g023060 Solanum pennellii HOM05D005962 ORTHO05D007325 3.0e-105 385.6 253 75.1
Migut.I00971 Erythranthe guttata HOM05D005962 ORTHO05D007325 3.9e-105 385.2 261 75.5
Phvul.010G143300 Phaseolus vulgaris HOM05D005962 ORTHO05D007325 5.1e-105 384.8 248 77.0
Psat4g195960 Pisum sativum HOM05D005962 ORTHO05D007325 5.1e-105 384.8 249 77.5
VMungo0331G0822 Vigna mungo HOM05D005962 ORTHO05D007325 8.8e-105 384.0 251 76.5
CiPaw.02G144100 Carya illinoinensis HOM05D005962 ORTHO05D007325 1.1e-104 383.6 259 74.9
Sabra17G0126400 Salix brachista HOM05D005962 ORTHO05D007325 1.5e-104 383.3 262 75.6
Atru.chr12.732 Acer truncatum HOM05D005962 ORTHO05D007325 2.0e-104 382.9 252 76.6
Gohir.A10G063800 Gossypium hirsutum HOM05D005962 ORTHO05D007325 2.0e-104 382.9 258 74.8
Duzib192G0276 Durio zibethinus HOM05D005962 ORTHO05D007325 4.4e-104 381.7 252 76.2
Manes.11G030300 Manihot esculenta HOM05D005962 ORTHO05D007325 4.4e-104 381.7 242 76.9
arahy.Tifrunner.gnm1.ann1.FEFU12 Arachis hypogaea HOM05D005962 ORTHO05D007325 7.4e-104 380.9 250 75.2
CANSAT21G1984 Cannabis sativa HOM05D005962 ORTHO05D007325 9.7e-104 380.6 247 76.1
Gohir.D10G065400 Gossypium hirsutum HOM05D005962 ORTHO05D007325 9.7e-104 380.6 258 74.8
Lj3g0005277 Lotus japonicus HOM05D005962 ORTHO05D007325 9.7e-104 380.6 239 78.7
Lalb_Chr01g0013231 Lupinus albus HOM05D005962 ORTHO05D007325 2.2e-103 379.4 252 74.2
GSVIVG01016927001 Vitis vinifera HOM05D005962 ORTHO05D007325 2.8e-103 379.0 227 81.1
ClCG07G013490 Citrullus lanatus HOM05D005962 ORTHO05D007325 4.8e-103 378.3 259 75.7
Manes.04G136400 Manihot esculenta HOM05D005962 ORTHO05D007325 6.3e-103 377.9 251 76.5
MSTRG.11013 Avicennia marina HOM05D005962 ORTHO05D007325 8.2e-103 377.5 261 73.6
PSO210G0258 Papaver somniferum HOM05D005962 ORTHO05D007325 8.2e-103 377.5 255 74.1
EL10Ac3g07358 Beta vulgaris HOM05D005962 ORTHO05D007325 1.1e-102 377.1 259 73.4
Sc19g0007830 Simmondsia chinensis HOM05D005962 ORTHO05D007325 1.4e-102 376.7 258 72.9
Sopen03g040020 Solanum pennellii HOM05D005962 ORTHO05D007325 1.4e-102 376.7 253 72.7
Ciclev10026335m.g Citrus clementina HOM05D005962 ORTHO05D007325 3.1e-102 375.6 253 75.1
CsaV3_3G023410 Cucumis sativus L. HOM05D005962 ORTHO05D007325 3.1e-102 375.6 258 74.8
QL08p056642 Quercus lobata HOM05D005962 ORTHO05D007325 3.1e-102 375.6 250 76.0
AUR62020986 Chenopodium quinoa HOM05D005962 ORTHO05D007325 4.1e-102 375.2 259 72.6
Eucgr.J02602 Eucalyptus grandis HOM05D005962 ORTHO05D007325 9.1e-102 374.0 262 72.9
Medtr8g015230 Medicago truncatula HOM05D005962 ORTHO05D007325 9.1e-102 374.0 249 75.5
SalBow6G5073 Salvia bowleyana HOM05D005962 ORTHO05D007325 1.2e-101 373.6 254 74.8
PSO210G7608 Papaver somniferum HOM05D005962 ORTHO05D007325 2.6e-101 372.5 255 72.9
Prupe.3G054900 Prunus persica HOM05D005962 ORTHO05D007325 2.6e-101 372.5 259 71.8
Sed0025844 Sechium edule HOM05D005962 ORTHO05D007325 1.0e-100 370.5 259 74.9
Gorai.011G069400 Gossypium raimondii HOM05D005962 ORTHO05D007325 1.7e-100 369.8 231 79.2
arahy.Tifrunner.gnm1.ann1.M52QXX Arachis hypogaea HOM05D005962 ORTHO05D007325 1.9e-99 366.3 229 78.2
HPP92_007682 Vanilla planifolia HOM05D005962 ORTHO05D007325 5.5e-99 364.8 258 71.3
PGR102G2175 Punica granatum HOM05D005962 ORTHO05D007325 2.7e-98 362.5 236 76.7
AUR62018448 Chenopodium quinoa HOM05D005962 ORTHO05D007325 3.6e-98 362.1 259 71.0
MELO3C013015.2 Cucumis melo HOM05D005962 ORTHO05D007325 6.1e-98 361.3 284 67.6
HanXRQChr15g0489361 Helianthus annuus HOM05D005962 ORTHO05D007325 1.1e-96 357.1 249 72.3
unitig_32.g10986 Utricularia gibba HOM05D005962 ORTHO05D007325 1.3e-95 353.6 260 69.6
Os06g0217500 Oryza sativa ssp. japonica HOM05D005962 ORTHO05D007325 2.2e-95 352.8 255 68.6
Ca_23283_v3 Cicer arietinum L. HOM05D005962 ORTHO05D007325 2.8e-95 352.4 253 72.3
FvH4_6g32730 Fragaria vesca HOM05D005962 ORTHO05D007325 1.3e-92 343.6 252 69.0
Solyc03g121210.4 Solanum lycopersicum HOM05D005962 ORTHO05D007325 1.7e-92 343.2 219 76.3
RcHm_v2.0_Chr2g0141751 Rosa chinensis HOM05D005962 ORTHO05D007325 8.5e-92 340.9 252 67.9
FAN02G1749 Fragaria x ananassa HOM05D005962 ORTHO05D007325 4.2e-91 338.6 252 67.9
Aa31LG8G8050 Aethionema arabicum HOM05D005962 ORTHO05D007325 5.5e-91 338.2 257 68.1
FAN05G1114 Fragaria x ananassa HOM05D005962 ORTHO05D007325 5.5e-91 338.2 249 68.3
Zm00001eb372970 Zea mays HOM05D005962 ORTHO05D007325 1.2e-90 337.0 257 68.1
Sp3g19410 Schrenkiella parvula HOM05D005962 ORTHO05D007325 4.7e-90 335.1 252 66.3
THA.LOC104805924 Tarenaya hassleriana HOM05D005962 ORTHO05D007325 3.0e-89 332.4 249 68.3
FAN09G1055 Fragaria x ananassa HOM05D005962 ORTHO05D007325 4.0e-89 332.0 252 66.7
SGA_v2.0_scaffold45G16998 Striga asiatica HOM05D005962 ORTHO05D007325 3.4e-88 328.9 208 77.9
Thhalv10021373m.g Eutrema salsugineum HOM05D005962 ORTHO05D007325 4.4e-88 328.6 250 66.0
AL3G35400 Arabidopsis lyrata HOM05D005962 ORTHO05D007325 1.3e-87 327.0 253 66.0
Gohir.A01G226000 Gossypium hirsutum HOM05D005962 ORTHO05D007325 2.8e-87 325.9 198 81.3
CARHR097270 Cardamine hirsuta HOM05D005962 ORTHO05D007325 3.7e-87 325.5 247 66.4
Carub.0003s2138 Capsella rubella HOM05D005962 ORTHO05D007325 6.3e-87 324.7 259 64.9
SHI11207 Sapria himalayana HOM05D005962 ORTHO05D007325 1.4e-86 323.6 242 66.1
BcaB06g26231 Brassica carinata HOM05D005962 ORTHO05D007325 7.0e-86 321.2 254 65.0
BcaC05g28175 Brassica carinata HOM05D005962 ORTHO05D007325 5.9e-85 318.2 246 65.0
C05p42110 Brassica napus HOM05D005962 ORTHO05D007325 3.8e-84 315.5 247 64.8
AT3G21350 Arabidopsis thaliana HOM05D005962 ORTHO05D007325 1.5e-83 313.5 253 65.2
A05p27250 Brassica napus HOM05D005962 ORTHO05D007325 1.5e-83 313.5 247 64.8
BraA05t21615Z Brassica rapa HOM05D005962 ORTHO05D007325 6.1e-82 308.1 257 62.6
BolC5t32941H Brassica oleracea HOM05D005962 ORTHO05D007325 1.4e-78 297.0 284 56.3
Cpa.g.sc131.1 Carica papaya HOM05D005962 ORTHO05D007325 2.7e-77 292.7 168 83.9
ATR0705G221 Amborella trichopoda HOM05D005962 ORTHO05D007325 2.5e-75 286.2 168 82.1
Migut.I00969 Erythranthe guttata HOM05D005962 ORTHO05D007325 8.9e-73 277.7 174 78.7
TPR.G39766 Trifolium pratense HOM05D005962 ORTHO05D007325 2.0e-72 276.6 185 75.7
Migut.O00801 Erythranthe guttata HOM05D005962 ORTHO05D007325 5.7e-72 275.0 173 78.0
Ah.04g150140 Amaranthus hybridus HOM05D005962 ORTHO05D007325 8.3e-71 271.2 168 77.4
Lj5A50T68 Lonicera japonica HOM05D005962 ORTHO05D007325 7.8e-69 264.6 171 80.7
Cfa019373 Carpinus fangiana HOM05D005962 ORTHO05D007325 8.9e-65 251.1 171 74.3
Pp3c11_22580 Physcomitrium patens HOM05D005962 ORTHO05D007325 1.5e-64 250.4 252 54.4
AagrBONN_evm.TU.Sc2ySwM_362.1658 Anthoceros agrestis HOM05D005962 ORTHO05D007325 5.4e-62 241.9 209 59.3
Mapoly0012s0176 Marchantia polymorpha HOM05D005962 ORTHO05D007325 5.0e-60 235.3 263 53.2
SMO143G0120 Selaginella moellendorffii HOM05D005962 ORTHO05D007325 8.6e-60 234.6 190 62.6
MD14G1079700 Malus domestica HOM05D005962 ORTHO05D007325 9.8e-56 221.1 169 69.2
CBR_g22489 Chara braunii HOM05D005962 ORTHO05D007325 9.6e-43 177.9 243 45.7
Medtr0361s0030 Medicago truncatula HOM05D005962 ORTHO05D007325 1.3e-39 167.5 103 79.6
Lj5C50T14 Lonicera japonica HOM05D005962 ORTHO05D007325 2.9e-39 166.4 88 87.5
Dinv30416 Davidia involucrata HOM05D005962 ORTHO05D007325 2.4e-38 163.3 215 45.1
QL05p018100 Quercus lobata HOM05D005962 ORTHO05D007325 2.4e-33 146.7 92 78.3
Lj3g0016976 Lotus japonicus HOM05D005962 ORTHO05D007325 4.0e-33 146.0 185 49.7
SEGI_18792 Sequoiadendron giganteum HOM05D005962 ORTHO05D007325 3.8e-31 139.4 80 82.5
Cfa019374 Carpinus fangiana HOM05D005962 ORTHO05D007325 8.7e-28 128.3 71 78.9
Lsat_1_v5_gn_2_99820 Lactuca sativa HOM05D005962 ORTHO05D007325 1.5e-27 127.5 84 73.8
RcHm_v2.0_Chr5g0064381 Rosa chinensis HOM05D005962 ORTHO05D007325 7.6e-24 115.2 85 63.5
Ah.04g150130 Amaranthus hybridus HOM05D000535 ORTHO05D000427 8.4e-23 111.7 90 64.4
TAR624G0741 Trochodendron aralioides HOM05D005962 ORTHO05D007325 4.2e-22 109.4 146 47.3
TAR623G1541 Trochodendron aralioides HOM05D005962 ORTHO05D007325 1.6e-18 97.4 58 77.6
TAR636G3265 Trochodendron aralioides HOM05D005962 ORTHO05D007325 3.7e-18 96.3 61 73.8
Nitab4.5_0008212g0010 Nicotiana tabacum HOM05D005962 ORTHO05D007325 1.1e-17 94.7 198 36.9
PRCOL_00006676 Prasinoderma coloniale HOM05D001184 ORTHO05D008450 2.0e-16 90.5 130 36.9
Zm00001eb084330 Zea mays HOM05D005962 ORTHO05D007325 2.0e-16 90.5 57 73.7
Zm00001eb192830 Zea mays HOM05D005962 ORTHO05D007325 1.3e-15 87.8 58 69.0
Pp3c7_2870 Physcomitrium patens HOM05D005962 ORTHO05D007325 1.7e-15 87.4 230 34.8
BraA09t39590Z Brassica rapa HOM05D002393 ORTHO05D002845 9.6e-11 71.6 81 50.6
GSVIVG01016925001 Vitis vinifera HOM05D000106 ORTHO05D000160 1.6e-10 70.9 52 59.6
Cpa.g.c26718.1 Carica papaya HOM05D005962 ORTHO05D007325 1.5e-08 64.3 53 62.3
Dinv30417 Davidia involucrata HOM05D000106 ORTHO05D000160 2.0e-08 63.9 56 55.4
C09p14660 Brassica napus HOM05D017738 ORTHO05D042708 2.9e-07 60.1 95 37.9
BolC9t54371H Brassica oleracea HOM05D017738 ORTHO05D042708 2.9e-07 60.1 95 37.9


User provided reference genes

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