Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006681 Daucus carota HOM05D003925 ORTHO05D004832 7.8e-267 923.3 496 100.0
Dinv19400 Davidia involucrata HOM05D003925 ORTHO05D004832 6.8e-178 627.9 510 67.1
Lsat_1_v5_gn_7_76521 Lactuca sativa HOM05D003925 ORTHO05D004832 7.8e-174 614.4 506 65.6
Actinidia00183 Actinidia chinensis HOM05D003925 ORTHO05D004832 1.5e-169 600.1 510 66.1
CAN.G798.55 Capsicum annuum HOM05D003925 ORTHO05D004832 1.3e-168 597.0 507 65.7
Aqoxy5G03033 Aquilegia oxysepala HOM05D003925 ORTHO05D004832 3.7e-168 595.5 499 65.1
CSS0002231 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 8.3e-168 594.3 493 66.7
Actinidia39010 Actinidia chinensis HOM05D003925 ORTHO05D004832 4.1e-167 592.0 508 65.6
Nn1g08458 Nelumbo nucifera HOM05D003925 ORTHO05D004832 1.7e-165 586.6 502 64.5
PGSC0003DMG400024923 Solanum tuberosum HOM05D003925 ORTHO05D004832 3.9e-165 585.5 505 64.4
Hma1.2p1_0884F.1_g232530 Hydrangea macrophylla HOM05D003925 ORTHO05D004832 1.1e-164 583.9 520 64.2
Hund15482 Selenicereus undatus HOM05D003925 ORTHO05D004832 1.1e-164 583.9 516 64.0
COL.COLO4_17737 Corchorus olitorius HOM05D003925 ORTHO05D004832 9.5e-164 580.9 479 67.2
SGA_v2.0_scaffold42G15910 Striga asiatica HOM05D003925 ORTHO05D004832 2.1e-163 579.7 512 63.3
Lj5C262G4 Lonicera japonica HOM05D003925 ORTHO05D005835 8.1e-163 577.8 458 67.7
Nn5g27797 Nelumbo nucifera HOM05D003925 ORTHO05D004832 4.0e-162 575.5 500 62.6
Oeu023407.1 Olea europaea HOM05D003925 ORTHO05D004832 1.3e-160 570.5 514 62.8
Lsat_1_v5_gn_9_121141 Lactuca sativa HOM05D003925 ORTHO05D004832 1.7e-160 570.1 507 61.7
Nitab4.5_0000948g0030 Nicotiana tabacum HOM05D003925 ORTHO05D004832 6.4e-160 568.2 506 63.6
Nitab4.5_0002596g0090 Nicotiana tabacum HOM05D003925 ORTHO05D004832 8.3e-160 567.8 505 63.0
PGR142G2211 Punica granatum HOM05D003925 ORTHO05D004832 1.9e-159 566.6 494 62.3
MSTRG.5212 Avicennia marina HOM05D003925 ORTHO05D004832 3.2e-159 565.8 514 62.3
Gohir.A04G132700 Gossypium hirsutum HOM05D003925 ORTHO05D004832 4.1e-159 565.5 476 65.8
HanXRQChr07g0187361 Helianthus annuus HOM05D003925 ORTHO05D004832 4.1e-159 565.5 498 63.7
TAR381G0375 Trochodendron aralioides HOM05D003925 ORTHO05D004832 5.4e-159 565.1 506 61.7
SalBow3G3816 Salvia bowleyana HOM05D003925 ORTHO05D004832 7.1e-159 564.7 511 63.2
MSTRG.16495 Avicennia marina HOM05D003925 ORTHO05D004832 1.2e-158 563.9 505 63.4
Manes.07G023200 Manihot esculenta HOM05D003925 ORTHO05D004832 1.2e-158 563.9 473 66.0
Actinidia26166 Actinidia chinensis HOM05D003925 ORTHO05D004832 1.6e-158 563.5 495 63.8
TWI23G0121 Tripterygium wilfordii HOM05D003925 ORTHO05D004832 4.6e-158 562.0 491 61.3
Duzib052G0643 Durio zibethinus HOM05D003925 ORTHO05D004832 6.0e-158 561.6 478 64.9
Haze_10061 Corylus avellana HOM05D003925 ORTHO05D004832 1.7e-157 560.1 479 65.6
ECA240G1679 Erigeron canadensis HOM05D003925 ORTHO05D004832 1.7e-157 560.1 479 63.0
vmacro19868 Vaccinium macrocarpon HOM05D003925 ORTHO05D004832 3.0e-157 559.3 510 60.8
Ah.03g136840 Amaranthus hybridus HOM05D003925 ORTHO05D004832 3.3e-156 555.8 506 62.1
Solyc01g103680.3 Solanum lycopersicum HOM05D003925 ORTHO05D004832 7.3e-156 554.7 509 61.7
Aa31LG4G9470 Aethionema arabicum HOM05D003925 ORTHO05D004832 6.2e-155 551.6 470 63.2
EL10Ac6g14144 Beta vulgaris HOM05D003925 ORTHO05D004832 6.2e-155 551.6 511 61.8
Duzib132G1049 Durio zibethinus HOM05D003925 ORTHO05D004832 1.4e-154 550.4 476 62.8
Migut.N00826 Erythranthe guttata HOM05D003925 ORTHO05D004832 3.1e-154 549.3 518 60.4
Sc07g0004570 Simmondsia chinensis HOM05D003925 ORTHO05D004832 4.4e-153 545.4 508 59.1
THA.LOC104799820 Tarenaya hassleriana HOM05D003925 ORTHO05D004832 7.6e-153 544.7 462 64.9
Actinidia06473 Actinidia chinensis HOM05D003925 ORTHO05D004832 1.3e-152 543.9 508 61.2
Gohir.D04G176300 Gossypium hirsutum HOM05D003925 ORTHO05D004832 1.7e-152 543.5 449 65.0
Sopen01g046090 Solanum pennellii HOM05D003925 ORTHO05D004832 1.7e-152 543.5 505 60.8
Gorai.012G167900 Gossypium raimondii HOM05D003925 ORTHO05D004832 2.2e-152 543.1 452 65.0
TWI14G0879 Tripterygium wilfordii HOM05D003925 ORTHO05D004832 2.9e-152 542.7 488 59.8
unitig_26.g9028 Utricularia gibba HOM05D003925 ORTHO05D005835 2.9e-152 542.7 486 61.5
Carub.0007s1672 Capsella rubella HOM05D003925 ORTHO05D004832 3.8e-152 542.3 461 63.3
HanXRQChr06g0181341 Helianthus annuus HOM05D003925 ORTHO05D004832 4.9e-152 542.0 494 62.1
Ciclev10000945m.g Citrus clementina HOM05D003925 ORTHO05D004832 8.4e-152 541.2 477 62.5
CDE08G0951 Ceratophyllum demersum HOM05D003925 ORTHO05D004832 1.1e-151 540.8 481 60.9
CANSAT54G0877 Cannabis sativa HOM05D003925 ORTHO05D004832 1.4e-151 540.4 513 60.8
CARHR231760 Cardamine hirsuta HOM05D003925 ORTHO05D004832 1.9e-151 540.0 463 62.0
Thecc.02G024000 Theobroma cacao HOM05D003925 ORTHO05D004832 4.1e-151 538.9 479 63.0
Oeu000132.1 Olea europaea HOM05D003925 ORTHO05D004832 7.1e-151 538.1 495 62.2
Cpa.g.sc30.25 Carica papaya HOM05D003925 ORTHO05D004832 9.2e-151 537.7 467 62.7
AUR62040618 Chenopodium quinoa HOM05D003925 ORTHO05D004832 9.2e-151 537.7 457 66.7
Thhalv10024818m.g Eutrema salsugineum HOM05D003925 ORTHO05D004832 1.6e-150 537.0 464 62.5
HanXRQChr16g0509421 Helianthus annuus HOM05D003925 ORTHO05D004832 3.5e-150 535.8 486 59.9
Dinv07476 Davidia involucrata HOM05D003925 ORTHO05D005835 1.0e-149 534.3 429 67.4
Gohir.D01G174000 Gossypium hirsutum HOM05D003925 ORTHO05D004832 1.0e-149 534.3 491 61.1
Peaxi162Scf00011g00941 Petunia axillaris HOM05D003925 ORTHO05D004832 1.0e-149 534.3 487 61.4
Gorai.002G216100 Gossypium raimondii HOM05D003925 ORTHO05D004832 1.7e-149 533.5 491 61.1
Manes.10G119400 Manihot esculenta HOM05D003925 ORTHO05D004832 1.7e-149 533.5 459 63.0
QL02p100243 Quercus lobata HOM05D003925 ORTHO05D004832 5.6e-148 528.5 432 66.0
Prupe.1G577500 Prunus persica HOM05D003925 ORTHO05D004832 1.6e-147 526.9 508 59.4
Phvul.006G218500 Phaseolus vulgaris HOM05D003925 ORTHO05D004832 6.2e-147 525.0 449 61.7
Psat1g223280 Pisum sativum HOM05D003925 ORTHO05D004832 1.8e-146 523.5 451 61.6
Glyma.12G167500 Glycine max HOM05D003925 ORTHO05D004832 5.2e-146 521.9 454 61.5
AUR62041951 Chenopodium quinoa HOM05D003925 ORTHO05D004832 4.4e-145 518.8 420 67.9
Medtr2g005930 Medicago truncatula HOM05D003925 ORTHO05D004832 2.9e-144 516.2 449 59.9
SEGI_07809 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 3.8e-144 515.8 488 55.7
TPR.G2147 Trifolium pratense HOM05D003925 ORTHO05D004832 4.9e-144 515.4 450 61.1
CiPaw.05G005700 Carya illinoinensis HOM05D003925 ORTHO05D004832 1.9e-143 513.5 479 61.6
Gohir.A01G182900 Gossypium hirsutum HOM05D003925 ORTHO05D004832 3.2e-143 512.7 461 61.4
Sed0019914 Sechium edule HOM05D003925 ORTHO05D004832 7.1e-143 511.5 458 60.0
MD08G1240800 Malus domestica HOM05D003925 ORTHO05D004832 1.2e-142 510.8 497 59.4
RcHm_v2.0_Chr7g0220701 Rosa chinensis HOM05D003925 ORTHO05D004832 3.5e-142 509.2 455 62.2
BolC1t01894H Brassica oleracea HOM05D003925 ORTHO05D004832 7.8e-142 508.1 459 62.1
ATR0584G077 Amborella trichopoda HOM05D003925 ORTHO05D004832 1.7e-141 506.9 504 56.5
C01p19670 Brassica napus HOM05D003925 ORTHO05D004832 3.0e-141 506.1 459 61.9
VMungo0540G0371 Vigna mungo HOM05D003925 ORTHO05D004832 3.9e-141 505.8 450 60.9
FAN04G1563 Fragaria x ananassa HOM05D003925 ORTHO05D004832 8.7e-141 504.6 459 61.2
Rhsim11G0124300 Rhododendron simsii HOM05D003925 ORTHO05D004832 1.1e-140 504.2 512 57.4
FvH4_5g28340 Fragaria vesca HOM05D003925 ORTHO05D004832 4.3e-140 502.3 459 61.2
Cfa004507 Carpinus fangiana HOM05D003925 ORTHO05D005835 7.3e-140 501.5 398 68.3
Eucgr.I02754 Eucalyptus grandis HOM05D003925 ORTHO05D004832 7.3e-140 501.5 465 59.6
BraA01t01508Z Brassica rapa HOM05D003925 ORTHO05D004832 1.3e-139 500.7 459 60.8
THA.LOC104800040 Tarenaya hassleriana HOM05D003925 ORTHO05D004832 1.3e-139 500.7 472 60.4
Atru.chr6.781 Acer truncatum HOM05D003925 ORTHO05D004832 2.1e-139 500.0 472 61.9
MD15G1434000 Malus domestica HOM05D003925 ORTHO05D004832 2.1e-139 500.0 382 68.6
Atru.chr6.812 Acer truncatum HOM05D003925 ORTHO05D004832 3.6e-139 499.2 472 61.4
A01p15700 Brassica napus HOM05D003925 ORTHO05D004832 6.2e-139 498.4 457 60.4
AT4G24330 Arabidopsis thaliana HOM05D003925 ORTHO05D004832 1.1e-138 497.7 459 59.5
Glyma.16G003600 Glycine max HOM05D003925 ORTHO05D004832 1.4e-138 497.3 460 58.7
Sp6g11590 Schrenkiella parvula HOM05D003925 ORTHO05D004832 4.0e-138 495.7 462 58.4
Sp7g22330 Schrenkiella parvula HOM05D003925 ORTHO05D004832 4.0e-138 495.7 459 59.0
CSS0020156 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 6.9e-138 495.0 417 64.0
AL7G28890 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 1.2e-137 494.2 460 60.0
PSO170G6240 Papaver somniferum HOM05D003925 ORTHO05D004832 1.2e-137 494.2 492 58.1
MELO3C016507.2 Cucumis melo HOM05D003925 ORTHO05D004832 1.5e-137 493.8 478 58.8
CiPaw.06G173300 Carya illinoinensis HOM05D003925 ORTHO05D004832 4.9e-136 488.8 482 58.7
Eucgr.L02024 Eucalyptus grandis HOM05D003925 ORTHO05D004832 4.9e-136 488.8 385 66.2
vmacro01723 Vaccinium macrocarpon HOM05D003925 ORTHO05D004832 4.9e-136 488.8 396 63.9
C07p53570 Brassica napus HOM05D003925 ORTHO05D004832 8.4e-136 488.0 454 58.8
FAN18G2864 Fragaria x ananassa HOM05D003925 ORTHO05D004832 8.4e-136 488.0 473 58.8
Potri.004G223000 Populus trichocarpa HOM05D003925 ORTHO05D004832 1.9e-135 486.9 487 58.3
A03p55280 Brassica napus HOM05D003925 ORTHO05D004832 3.2e-135 486.1 454 57.9
CsaV3_3G006350 Cucumis sativus L. HOM05D003925 ORTHO05D004832 5.4e-135 485.3 475 57.9
MBI09_g03430_MAGBIO Magnolia biondii HOM05D003925 ORTHO05D004832 5.4e-135 485.3 502 56.2
Sabra01G0168900 Salix brachista HOM05D003925 ORTHO05D004832 5.4e-135 485.3 462 58.9
Zm00001eb289240 Zea mays HOM05D003925 ORTHO05D004832 1.2e-134 484.2 475 57.1
BraA03t11971Z Brassica rapa HOM05D003925 ORTHO05D004832 1.6e-134 483.8 466 57.1
Lj6g0026503 Lotus japonicus HOM05D003925 ORTHO05D004832 1.6e-134 483.8 456 57.5
PSO782G4904 Papaver somniferum HOM05D003925 ORTHO05D004832 3.5e-134 482.6 492 57.3
BcaNung05636 Brassica carinata HOM05D003925 ORTHO05D004832 4.6e-134 482.3 463 59.2
BolC7t45848H Brassica oleracea HOM05D003925 ORTHO05D004832 7.9e-134 481.5 454 57.9
ClCG10G007000 Citrullus lanatus HOM05D003925 ORTHO05D004832 7.9e-134 481.5 494 56.3
Carub.0008s0983 Capsella rubella HOM05D003925 ORTHO05D004832 2.1e-131 473.4 460 56.5
C03p33290 Brassica napus HOM05D003925 ORTHO05D004832 3.6e-131 472.6 469 55.9
Lalb_Chr15g0090731 Lupinus albus HOM05D003925 ORTHO05D004832 3.6e-131 472.6 464 58.2
BcaC01g04841 Brassica carinata HOM05D003925 ORTHO05D004832 4.8e-131 472.2 451 57.6
BolC3t15651H Brassica oleracea HOM05D003925 ORTHO05D004832 4.8e-131 472.2 469 55.9
Lj9C300G1 Lonicera japonica HOM05D003925 ORTHO05D004832 1.1e-130 471.1 435 59.5
CSS0030901 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 1.4e-130 470.7 419 61.8
BcaC06g32885 Brassica carinata HOM05D003925 ORTHO05D004832 2.0e-129 466.8 454 56.4
arahy.Tifrunner.gnm1.ann1.0HG9JC Arachis hypogaea HOM05D003925 ORTHO05D004832 3.4e-129 466.1 480 56.0
Eucgr.L02026 Eucalyptus grandis HOM05D003925 ORTHO05D004832 7.6e-129 464.9 317 74.1
Aa31LG3G6740 Aethionema arabicum HOM05D003925 ORTHO05D004832 1.3e-128 464.2 463 55.5
Zm00001eb348650 Zea mays HOM05D003925 ORTHO05D004832 6.4e-128 461.8 385 62.1
BcaB01g02930 Brassica carinata HOM05D003925 ORTHO05D004832 1.1e-127 461.1 459 56.0
AL8G23900 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 2.4e-127 459.9 474 54.9
A03p27580 Brassica napus HOM05D003925 ORTHO05D004832 1.6e-126 457.2 463 54.9
CARHR258770 Cardamine hirsuta HOM05D003925 ORTHO05D004832 3.5e-126 456.1 466 55.4
Thhalv10013427m.g Eutrema salsugineum HOM05D003925 ORTHO05D004832 3.5e-126 456.1 464 55.4
BraA03t14587Z Brassica rapa HOM05D003925 ORTHO05D004832 4.6e-126 455.7 454 55.7
AT5G49945 Arabidopsis thaliana HOM05D003925 ORTHO05D004832 7.9e-126 454.9 466 54.5
arahy.Tifrunner.gnm1.ann1.D6FTCL Arachis hypogaea HOM05D003925 ORTHO05D004832 1.8e-125 453.8 489 54.2
CDE06G0202 Ceratophyllum demersum HOM05D003925 ORTHO05D004832 3.3e-124 449.5 471 53.9
Ca_00045_v3 Cicer arietinum L. HOM05D003925 ORTHO05D004832 7.4e-124 448.4 451 56.8
HPP92_013757 Vanilla planifolia HOM05D003925 ORTHO05D004832 1.6e-123 447.2 487 52.6
SGA_v2.0_scaffold8G04435 Striga asiatica HOM05D003925 ORTHO05D004832 3.7e-115 419.5 434 56.2
Mapoly0037s0012 Marchantia polymorpha HOM05D003925 ORTHO05D004832 5.3e-114 415.6 476 51.1
Os05g0432400 Oryza sativa ssp. japonica HOM05D003925 ORTHO05D004832 1.6e-110 404.1 383 56.4
CARHR231750 Cardamine hirsuta HOM05D003925 ORTHO05D004832 3.9e-109 399.4 277 69.7
ECA236G3450 Erigeron canadensis HOM05D003925 ORTHO05D004832 2.5e-103 380.2 474 50.8
SMO356G0110 Selaginella moellendorffii HOM05D003925 ORTHO05D004832 1.0e-101 374.8 378 52.1
Pp3c5_6620 Physcomitrium patens HOM05D003925 ORTHO05D004832 1.2e-94 351.3 458 45.4
BcaC09g50878 Brassica carinata HOM05D003925 ORTHO05D004832 1.0e-93 348.2 270 69.3
SEGI_11230 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 1.6e-89 334.3 342 52.3
Cc02_g23030 Coffea canephora HOM05D003925 ORTHO05D004832 2.7e-73 280.4 192 77.1
AagrBONN_evm.TU.Sc2ySwM_362.431 Anthoceros agrestis HOM05D003925 ORTHO05D004832 3.6e-62 243.4 332 43.4
CBR_g4722 Chara braunii HOM05D003925 ORTHO05D004832 1.5e-60 238.0 364 39.8
GSVIVG01023266001 Vitis vinifera HOM05D003925 ORTHO05D004832 1.3e-56 224.9 195 64.6
SHI34757 Sapria himalayana HOM05D003925 ORTHO05D004832 8.6e-48 195.7 264 43.6
SEGI_10393 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 4.0e-45 186.8 147 63.3
CSS0013131 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 1.2e-44 185.3 137 73.7
BcaC01g04842 Brassica carinata HOM05D003925 ORTHO05D004832 9.2e-42 175.6 310 40.3
CSS0019842 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 6.0e-41 172.9 129 72.9
Haze_10058 Corylus avellana HOM05D003925 ORTHO05D004832 1.5e-39 168.3 145 66.9
Migut.B00784 Erythranthe guttata HOM05D003925 ORTHO05D004832 1.2e-38 165.2 129 70.5
CAN.G697.8 Capsicum annuum HOM05D003925 ORTHO05D004832 2.1e-38 164.5 117 65.8
Lalb_Chr20g0123671 Lupinus albus HOM05D003925 ORTHO05D004832 1.6e-33 148.3 99 68.7
Cre02.g106300 Chlamydomonas reinhardtii HOM05D003925 ORTHO05D004832 5.1e-32 143.3 343 33.5
Lj6g0024462 Lotus japonicus HOM05D003925 ORTHO05D004832 3.2e-26 124.0 316 33.2
MCO13G620 Micromonas commoda HOM05D003925 ORTHO05D004832 1.3e-24 118.6 401 27.9
CARHR216310 Cardamine hirsuta HOM05D003925 ORTHO05D004832 2.1e-22 111.3 99 55.6
Zm00001eb254380 Zea mays HOM05D002934 ORTHO05D004560 2.0e-20 104.8 125 44.8
Zm00001eb276420 Zea mays HOM05D002934 ORTHO05D004560 2.0e-20 104.8 125 44.8
AL3G33580 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 4.9e-19 100.1 308 31.2
CAN.G386.33 Capsicum annuum HOM05D003925 ORTHO05D004832 3.9e-16 90.5 70 57.1
BolC8t48574H Brassica oleracea HOM05D003925 ORTHO05D004832 2.0e-12 78.2 127 44.9
CAN.G963.3 Capsicum annuum HOM05D003925 ORTHO05D004832 1.9e-10 71.6 47 72.3
Thecc.02G021600 Theobroma cacao HOM05D003925 ORTHO05D004832 3.9e-08 63.9 71 50.7


User provided reference genes

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