Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006102 Daucus carota HOM05D001406 ORTHO05D006300 6.7e-81 303.9 148 100.0
DCAR_002468 Daucus carota HOM05D001406 ORTHO05D006300 3.4e-40 168.7 114 75.4
Lalb_Chr18g0051641 Lupinus albus HOM05D001406 ORTHO05D006300 7.0e-30 134.4 115 60.0
Phvul.009G248800 Phaseolus vulgaris HOM05D001406 ORTHO05D006300 1.2e-29 133.7 114 59.6
VMungo1309G1537 Vigna mungo HOM05D001406 ORTHO05D006300 1.6e-29 133.3 114 59.6
Glyma.15G149000 Glycine max HOM05D001406 ORTHO05D006300 6.0e-29 131.3 115 59.1
arahy.Tifrunner.gnm1.ann1.4JB89L Arachis hypogaea HOM05D001406 ORTHO05D006300 7.8e-29 131.0 115 58.3
arahy.Tifrunner.gnm1.ann1.Q4RDUH Arachis hypogaea HOM05D001406 ORTHO05D006300 7.8e-29 131.0 115 58.3
Glyma.09G044100 Glycine max HOM05D001406 ORTHO05D006300 2.3e-28 129.4 115 58.3
Lj6C678T4 Lonicera japonica HOM05D001406 ORTHO05D006300 3.0e-28 129.0 115 56.5
Thecc.04G286100 Theobroma cacao HOM05D001406 ORTHO05D006300 1.1e-27 127.1 113 57.5
Hma1.2p1_1185F.1_g265020 Hydrangea macrophylla HOM05D001406 ORTHO05D006300 1.9e-27 126.3 119 53.8
Potri.010G013300 Populus trichocarpa HOM05D001406 ORTHO05D006300 1.9e-27 126.3 115 56.5
Ca_01929_v3 Cicer arietinum L. HOM05D001406 ORTHO05D006300 2.5e-27 125.9 114 56.1
COL.COLO4_13851 Corchorus olitorius HOM05D001406 ORTHO05D006300 2.5e-27 125.9 114 59.6
Psat1g154920 Pisum sativum HOM05D001406 ORTHO05D006300 2.5e-27 125.9 114 55.3
QL06p009115 Quercus lobata HOM05D001406 ORTHO05D006300 2.5e-27 125.9 115 55.7
QL06p009350 Quercus lobata HOM05D001406 ORTHO05D006300 2.5e-27 125.9 115 55.7
Hma1.2p1_1185F.1_g265030 Hydrangea macrophylla HOM05D001406 ORTHO05D006300 5.6e-27 124.8 118 53.4
Manes.03G196500 Manihot esculenta HOM05D001406 ORTHO05D006300 7.3e-27 124.4 108 61.1
Sabra10G0008500 Salix brachista HOM05D001406 ORTHO05D006300 7.3e-27 124.4 115 55.7
TAR370G0006 Trochodendron aralioides HOM05D001406 ORTHO05D006300 9.5e-27 124.0 115 54.8
CSS0049595 Camellia sinensis var. sinensis HOM05D001406 ORTHO05D006300 1.2e-26 123.6 167 46.1
Dinv44369 Davidia involucrata HOM05D001406 ORTHO05D006300 1.6e-26 123.2 115 57.4
GSVIVG01017722001 Vitis vinifera HOM05D001406 ORTHO05D006300 1.6e-26 123.2 113 55.8
Medtr2g436590 Medicago truncatula HOM05D001406 ORTHO05D006300 2.8e-26 122.5 114 54.4
Thhalv10024228m.g Eutrema salsugineum HOM05D001406 ORTHO05D006300 4.7e-26 121.7 105 57.1
Lj6g0019990 Lotus japonicus HOM05D001406 ORTHO05D006300 4.7e-26 121.7 115 54.8
Nn4g25794 Nelumbo nucifera HOM05D001406 ORTHO05D006300 4.7e-26 121.7 115 54.8
Prupe.1G134700 Prunus persica HOM05D001406 ORTHO05D006300 4.7e-26 121.7 115 52.2
Atru.chr4.2868 Acer truncatum HOM05D001406 ORTHO05D006300 1.1e-25 120.6 115 53.9
Migut.G00150 Erythranthe guttata HOM05D001406 ORTHO05D006300 1.1e-25 120.6 115 53.9
Cc03_g01780 Coffea canephora HOM05D001406 ORTHO05D006300 1.4e-25 120.2 114 52.6
Sp7g14340 Schrenkiella parvula HOM05D001406 ORTHO05D006300 1.4e-25 120.2 108 54.6
CiPaw.01G147700 Carya illinoinensis HOM05D001406 ORTHO05D006300 1.8e-25 119.8 115 53.9
Cfa015397 Carpinus fangiana HOM05D001406 ORTHO05D006300 2.3e-25 119.4 115 54.8
Haze_01188 Corylus avellana HOM05D001406 ORTHO05D006300 2.3e-25 119.4 115 54.8
Solyc12g099510.3 Solanum lycopersicum HOM05D001406 ORTHO05D006300 3.1e-25 119.0 114 52.6
Sopen12g034190 Solanum pennellii HOM05D001406 ORTHO05D006300 3.1e-25 119.0 114 52.6
Carub.0007s2577 Capsella rubella HOM05D001406 ORTHO05D006300 5.2e-25 118.2 107 55.1
Gohir.A10G164700 Gossypium hirsutum HOM05D001406 ORTHO05D006300 5.2e-25 118.2 115 54.8
Nitab4.5_0000570g0200 Nicotiana tabacum HOM05D001406 ORTHO05D006300 6.8e-25 117.9 112 50.9
Nitab4.5_0003466g0080 Nicotiana tabacum HOM05D001406 ORTHO05D006300 6.8e-25 117.9 113 50.4
RcHm_v2.0_Chr4g0422791 Rosa chinensis HOM05D001406 ORTHO05D006300 6.8e-25 117.9 115 52.2
THA.LOC104821780 Tarenaya hassleriana HOM05D001406 ORTHO05D006300 6.8e-25 117.9 107 54.2
Atru.chr4.2862 Acer truncatum HOM05D001406 ORTHO05D006300 8.9e-25 117.5 115 53.9
Actinidia00013 Actinidia chinensis HOM05D001406 ORTHO05D006300 8.9e-25 117.5 115 52.2
BcaC08g43650 Brassica carinata HOM05D001406 ORTHO05D006300 8.9e-25 117.5 108 55.6
C06p10680 Brassica napus HOM05D001406 ORTHO05D006300 8.9e-25 117.5 108 55.6
BolC6t36150H Brassica oleracea HOM05D001406 ORTHO05D006300 8.9e-25 117.5 108 55.6
BolC7t45276H Brassica oleracea HOM05D001406 ORTHO05D006300 8.9e-25 117.5 108 55.6
BraA03t14045Z Brassica rapa HOM05D001406 ORTHO05D006300 8.9e-25 117.5 108 55.6
MD16G1167900 Malus domestica HOM05D001406 ORTHO05D006300 8.9e-25 117.5 115 51.3
Rhsim02G0008400 Rhododendron simsii HOM05D001406 ORTHO05D006300 8.9e-25 117.5 115 51.3
AT4G15890 Arabidopsis thaliana HOM05D001406 ORTHO05D006300 1.2e-24 117.1 107 54.2
CARHR290420 Cardamine hirsuta HOM05D001406 ORTHO05D006300 1.2e-24 117.1 107 54.2
Gorai.011G191000 Gossypium raimondii HOM05D001406 ORTHO05D006300 1.2e-24 117.1 115 54.8
Oeu026316.2 Olea europaea HOM05D001406 ORTHO05D006300 1.2e-24 117.1 112 53.6
AL7G39380 Arabidopsis lyrata HOM05D001406 ORTHO05D006300 1.5e-24 116.7 107 54.2
Lsat_1_v5_gn_6_95741 Lactuca sativa HOM05D001406 ORTHO05D006300 1.5e-24 116.7 115 53.0
TPR.G26890 Trifolium pratense HOM05D001406 ORTHO05D006300 1.5e-24 116.7 114 53.5
ClCG06G005070 Citrullus lanatus HOM05D001406 ORTHO05D006300 2.0e-24 116.3 114 55.3
vmacro15227 Vaccinium macrocarpon HOM05D001406 ORTHO05D006300 2.6e-24 115.9 116 50.9
PGSC0003DMG401004707 Solanum tuberosum HOM05D001406 ORTHO05D006300 3.4e-24 115.5 114 50.9
Atru.chr4.2866 Acer truncatum HOM05D001406 ORTHO05D006300 4.4e-24 115.2 116 52.6
A03p49440 Brassica napus HOM05D001406 ORTHO05D006300 4.4e-24 115.2 108 54.6
CAN.G484.37 Capsicum annuum HOM05D001406 ORTHO05D006300 4.4e-24 115.2 114 50.9
MELO3C021323.2 Cucumis melo HOM05D001406 ORTHO05D006300 4.4e-24 115.2 113 53.1
BcaC06g32972 Brassica carinata HOM05D001406 ORTHO05D006300 5.8e-24 114.8 108 53.7
Duzib212G0336 Durio zibethinus HOM05D001406 ORTHO05D006300 5.8e-24 114.8 115 52.2
FvH4_4g18310 Fragaria vesca HOM05D001406 ORTHO05D006300 5.8e-24 114.8 115 50.4
FAN12G0087 Fragaria x ananassa HOM05D001406 ORTHO05D006300 5.8e-24 114.8 115 50.4
HanXRQChr16g0501031 Helianthus annuus HOM05D001406 ORTHO05D006300 5.8e-24 114.8 104 55.8
CANSAT78G1952 Cannabis sativa HOM05D001406 ORTHO05D006300 7.5e-24 114.4 115 49.6
FAN12G4194 Fragaria x ananassa HOM05D001406 ORTHO05D006300 7.5e-24 114.4 115 50.4
ECA232G4578 Erigeron canadensis HOM05D001406 ORTHO05D006300 9.8e-24 114.0 106 54.7
Gohir.D10G170900 Gossypium hirsutum HOM05D001406 ORTHO05D006300 9.8e-24 114.0 115 53.9
Aqoxy2G02952 Aquilegia oxysepala HOM05D001406 ORTHO05D006300 1.3e-23 113.6 113 55.8
AUR62025017 Chenopodium quinoa HOM05D001406 ORTHO05D006300 1.3e-23 113.6 115 52.2
AUR62034308 Chenopodium quinoa HOM05D001406 ORTHO05D006300 1.3e-23 113.6 115 52.2
Ciclev10004172m.g Citrus clementina HOM05D001406 ORTHO05D006300 1.7e-23 113.2 113 51.3
CsaV3_UNG044300 Cucumis sativus L. HOM05D001406 ORTHO05D006300 1.7e-23 113.2 113 53.1
CsaV3_UNG067560 Cucumis sativus L. HOM05D001406 ORTHO05D006300 1.7e-23 113.2 113 53.1
CsaV3_UNG225770 Cucumis sativus L. HOM05D001406 ORTHO05D006300 1.7e-23 113.2 113 53.1
Peaxi162Scf00646g00226 Petunia axillaris HOM05D001406 ORTHO05D006300 1.7e-23 113.2 114 52.6
Hund20543 Selenicereus undatus HOM05D001406 ORTHO05D006300 1.7e-23 113.2 115 53.9
Actinidia14294 Actinidia chinensis HOM05D001406 ORTHO05D006300 2.2e-23 112.8 115 51.3
HPP92_015972 Vanilla planifolia HOM05D001406 ORTHO05D006300 2.2e-23 112.8 105 52.4
MSTRG.3907 Avicennia marina HOM05D001406 ORTHO05D006300 2.9e-23 112.5 113 54.9
Eucgr.C00332 Eucalyptus grandis HOM05D001406 ORTHO05D006300 6.4e-23 111.3 115 49.6
Eucgr.C00455 Eucalyptus grandis HOM05D001406 ORTHO05D006300 6.4e-23 111.3 115 49.6
Cpa.g.sc16.181 Carica papaya HOM05D001406 ORTHO05D006300 8.3e-23 110.9 115 52.2
Sc13g0003410 Simmondsia chinensis HOM05D001406 ORTHO05D006300 8.3e-23 110.9 115 51.3
SGA_v2.0_scaffold67G22623 Striga asiatica HOM05D001406 ORTHO05D006300 1.1e-22 110.5 117 47.0
Sed0021428 Sechium edule HOM05D001406 ORTHO05D006300 2.4e-22 109.4 111 55.0
Aa31LG10G6250 Aethionema arabicum HOM05D001406 ORTHO05D006300 4.1e-22 108.6 107 51.4
Eucgr.C00258 Eucalyptus grandis HOM05D001406 ORTHO05D006300 4.1e-22 108.6 114 47.4
PSO210G3685 Papaver somniferum HOM05D001406 ORTHO05D006300 4.1e-22 108.6 113 52.2
SalBow2G2741 Salvia bowleyana HOM05D001406 ORTHO05D006300 4.1e-22 108.6 115 47.8
TWI53G1101 Tripterygium wilfordii HOM05D001406 ORTHO05D006300 7.0e-22 107.8 115 48.7
PSO170G4998 Papaver somniferum HOM05D001406 ORTHO05D006300 1.2e-21 107.1 113 51.3
PGR031G1922 Punica granatum HOM05D001406 ORTHO05D006300 3.5e-21 105.5 115 47.8
MBI19_g25352_MAGBIO Magnolia biondii HOM05D001406 ORTHO05D006300 4.6e-21 105.1 114 52.6
EL10Ac3g06610 Beta vulgaris HOM05D001406 ORTHO05D006300 7.8e-21 104.4 115 50.4
CDE02G0109 Ceratophyllum demersum HOM05D001406 ORTHO05D006300 2.3e-20 102.8 107 52.3
Ah.04g153610 Amaranthus hybridus HOM05D001406 ORTHO05D006300 5.1e-20 101.7 115 47.0
Os12g0548100 Oryza sativa ssp. japonica HOM05D001406 ORTHO05D006300 5.1e-20 101.7 103 52.4
Zm00001eb410230 Zea mays HOM05D001406 ORTHO05D006300 8.6e-20 100.9 104 51.0
Lj6g0027272 Lotus japonicus HOM05D001406 ORTHO05D006300 1.5e-19 100.1 123 43.9
unitig_37.g12399 Utricularia gibba HOM05D001406 ORTHO05D006300 4.3e-19 98.6 114 46.5
SHI00255 Sapria himalayana HOM05D001406 ORTHO05D006300 1.2e-18 97.1 121 41.3
SEGI_32620 Sequoiadendron giganteum HOM05D001406 ORTHO05D006300 6.2e-18 94.7 120 43.3
BcaC06g33438 Brassica carinata HOM05D001406 ORTHO05D006300 2.0e-16 89.7 108 47.2
Mapoly0098s0043 Marchantia polymorpha HOM05D001406 ORTHO05D006300 2.9e-15 85.9 157 37.6
Oeu016245.1 Olea europaea HOM05D001406 ORTHO05D006300 3.7e-15 85.5 100 51.0
Eucgr.C00460 Eucalyptus grandis HOM05D001406 ORTHO05D006300 1.4e-14 83.6 100 48.0
SMO144G0076 Selaginella moellendorffii HOM05D001406 ORTHO05D006300 6.6e-12 74.7 78 47.4
AagrBONN_evm.TU.Sc2ySwM_117.1301 Anthoceros agrestis HOM05D001406 ORTHO05D006300 4.7e-10 68.6 120 34.2
Medtr7g110590 Medicago truncatula HOM05D001406 ORTHO05D006300 1.4e-06 57.0 88 38.6


User provided reference genes

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