Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004562 Daucus carota HOM05D006943 ORTHO05D008565 1.5e-147 526.2 266 100.0
Dinv37491 Davidia involucrata HOM05D006943 ORTHO05D008565 1.3e-34 151.0 304 35.2
HanXRQChr03g0081291 Helianthus annuus HOM05D006943 ORTHO05D008565 1.3e-34 151.0 264 37.5
Cc10_g14290 Coffea canephora HOM05D006943 ORTHO05D008565 1.7e-34 150.6 277 36.5
Lsat_1_v5_gn_3_68681 Lactuca sativa HOM05D006943 ORTHO05D008565 1.4e-33 147.5 264 39.0
SalBow8G0710 Salvia bowleyana HOM05D006943 ORTHO05D008565 3.9e-31 139.4 287 35.2
Lsat_1_v5_gn_5_56401 Lactuca sativa HOM05D006943 ORTHO05D008565 3.3e-30 136.3 261 36.0
CARHR239150 Cardamine hirsuta HOM05D006943 ORTHO05D008565 1.3e-29 134.4 283 32.5
Ciclev10009072m.g Citrus clementina HOM05D006943 ORTHO05D008565 2.2e-29 133.7 286 32.9
PGSC0003DMG400029553 Solanum tuberosum HOM05D006943 ORTHO05D008565 2.8e-29 133.3 302 30.8
ECA246G0365 Erigeron canadensis HOM05D006943 ORTHO05D008565 3.7e-29 132.9 276 36.2
Oeu008780.1 Olea europaea HOM05D006943 ORTHO05D008565 3.7e-29 132.9 274 35.4
Actinidia25739 Actinidia chinensis HOM05D006943 ORTHO05D008565 4.8e-29 132.5 283 33.9
HanXRQChr17g0539241 Helianthus annuus HOM05D006943 ORTHO05D008565 4.8e-29 132.5 274 32.8
Nitab4.5_0005058g0010 Nicotiana tabacum HOM05D006943 ORTHO05D008565 6.3e-29 132.1 306 31.4
Sopen08g022790 Solanum pennellii HOM05D006943 ORTHO05D008565 8.2e-29 131.7 305 29.8
Nitab4.5_0001942g0070 Nicotiana tabacum HOM05D006943 ORTHO05D008565 1.4e-28 131.0 307 29.3
Carub.0007s0929 Capsella rubella HOM05D006943 ORTHO05D008565 2.4e-28 130.2 303 31.7
GSVIVG01035569001 Vitis vinifera HOM05D006943 ORTHO05D008565 2.4e-28 130.2 259 32.4
Peaxi162Scf00213g00939 Petunia axillaris HOM05D006943 ORTHO05D008565 6.9e-28 128.6 305 31.8
AL7G20800 Arabidopsis lyrata HOM05D006943 ORTHO05D008565 9.1e-28 128.3 303 31.7
Solyc08g069160.3 Solanum lycopersicum HOM05D006943 ORTHO05D008565 9.1e-28 128.3 307 29.6
CAN.G480.10 Capsicum annuum HOM05D006943 ORTHO05D008565 1.5e-27 127.5 322 27.6
Ca_01518_v3 Cicer arietinum L. HOM05D006943 ORTHO05D008565 2.6e-27 126.7 308 33.1
AT4G31270 Arabidopsis thaliana HOM05D006943 ORTHO05D008565 4.5e-27 125.9 298 30.9
Haze_21789 Corylus avellana HOM05D006943 ORTHO05D008565 4.5e-27 125.9 299 31.8
Thhalv10025787m.g Eutrema salsugineum HOM05D006943 ORTHO05D008565 4.5e-27 125.9 306 30.7
Atru.chr7.2692 Acer truncatum HOM05D006943 ORTHO05D008565 5.9e-27 125.6 268 34.0
Psat6g033160 Pisum sativum HOM05D006943 ORTHO05D008565 5.9e-27 125.6 293 31.7
Aa31LG2G19090 Aethionema arabicum HOM05D006943 ORTHO05D008565 1.7e-26 124.0 296 31.1
THA.LOC104803585 Tarenaya hassleriana HOM05D006943 ORTHO05D008565 3.8e-26 122.9 299 31.8
Medtr1g009220 Medicago truncatula HOM05D006943 ORTHO05D008565 5.0e-26 122.5 308 30.5
Cpa.g.sc148.5 Carica papaya HOM05D006943 ORTHO05D008565 8.5e-26 121.7 288 29.9
VMungo0647G1044 Vigna mungo HOM05D006943 ORTHO05D008565 8.5e-26 121.7 296 32.1
Dinv38807 Davidia involucrata HOM05D006943 ORTHO05D008565 1.9e-25 120.6 169 40.8
Phvul.001G077900 Phaseolus vulgaris HOM05D006943 ORTHO05D008565 1.9e-25 120.6 302 33.4
TWI63G1698 Tripterygium wilfordii HOM05D006943 ORTHO05D008565 1.9e-25 120.6 294 30.3
AUR62038724 Chenopodium quinoa HOM05D006943 ORTHO05D008565 2.5e-25 120.2 284 30.6
AUR62043827 Chenopodium quinoa HOM05D006943 ORTHO05D008565 2.5e-25 120.2 284 30.6
Migut.E01408 Erythranthe guttata HOM05D006943 ORTHO05D008565 4.2e-25 119.4 290 32.1
Migut.E01420 Erythranthe guttata HOM05D006943 ORTHO05D008565 4.2e-25 119.4 290 32.1
CSS0049214 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 1.2e-24 117.9 174 39.7
TPR.G11968 Trifolium pratense HOM05D006943 ORTHO05D008565 1.2e-24 117.9 141 44.7
AUR62020649 Chenopodium quinoa HOM05D006943 ORTHO05D008565 1.6e-24 117.5 284 29.9
Cfa013306 Carpinus fangiana HOM05D006943 ORTHO05D008565 2.1e-24 117.1 296 30.1
Manes.16G137900 Manihot esculenta HOM05D006943 ORTHO05D008565 1.0e-23 114.8 321 30.8
A08p18750 Brassica napus HOM05D006943 ORTHO05D008565 3.0e-23 113.2 311 30.2
COL.COLO4_18631 Corchorus olitorius HOM05D006943 ORTHO05D008565 3.9e-23 112.8 303 30.4
ECA240G4190 Erigeron canadensis HOM05D006943 ORTHO05D008565 3.9e-23 112.8 264 32.2
BolC3t21121H Brassica oleracea HOM05D006943 ORTHO05D008565 8.8e-23 111.7 301 29.6
BraA08t33836Z Brassica rapa HOM05D006943 ORTHO05D008565 8.8e-23 111.7 305 28.9
Sc06g0001270 Simmondsia chinensis HOM05D006943 ORTHO05D008565 8.8e-23 111.7 309 28.8
Glyma.17G194700 Glycine max HOM05D006943 ORTHO05D008565 1.5e-22 110.9 302 33.1
CSS0017346 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 2.0e-22 110.5 108 49.1
CSS0048200 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 2.0e-22 110.5 108 49.1
Potri.006G279100 Populus trichocarpa HOM05D006943 ORTHO05D008565 2.0e-22 110.5 83 57.8
Duzib168G0749 Durio zibethinus HOM05D006943 ORTHO05D008565 2.6e-22 110.2 304 29.9
Lj5g0018295 Lotus japonicus HOM05D006943 ORTHO05D008565 2.6e-22 110.2 304 30.6
Sed0013911 Sechium edule HOM05D006943 ORTHO05D008565 3.3e-22 109.8 289 29.8
BcaC01g01105 Brassica carinata HOM05D006943 ORTHO05D008565 4.4e-22 109.4 303 29.7
C03p88130 Brassica napus HOM05D006943 ORTHO05D008565 4.4e-22 109.4 303 29.7
Ah.11g044140 Amaranthus hybridus HOM05D006943 ORTHO05D008565 9.7e-22 108.2 283 28.3
Sp7g29130 Schrenkiella parvula HOM05D006943 ORTHO05D008565 1.3e-21 107.8 132 41.7
Prupe.1G456500 Prunus persica HOM05D006943 ORTHO05D008565 1.7e-21 107.5 326 29.8
CANSAT35G2034 Cannabis sativa HOM05D006943 ORTHO05D008565 2.2e-21 107.1 305 30.2
TAR636G0756 Trochodendron aralioides HOM05D006943 ORTHO05D008565 2.2e-21 107.1 272 29.4
Potri.018G002801 Populus trichocarpa HOM05D006943 ORTHO05D008565 2.8e-21 106.7 201 34.8
FvH4_2g36510 Fragaria vesca HOM05D006943 ORTHO05D008565 3.7e-21 106.3 164 38.4
Lalb_Chr22g0361191 Lupinus albus HOM05D006943 ORTHO05D008565 3.7e-21 106.3 331 26.9
QL12p025818 Quercus lobata HOM05D006943 ORTHO05D008565 3.7e-21 106.3 326 27.6
arahy.Tifrunner.gnm1.ann1.X8DLDE Arachis hypogaea HOM05D006943 ORTHO05D008565 4.8e-21 105.9 231 32.5
Eucgr.C02135 Eucalyptus grandis HOM05D006943 ORTHO05D008565 6.3e-21 105.5 133 41.4
Eucgr.L02411 Eucalyptus grandis HOM05D006943 ORTHO05D008565 6.3e-21 105.5 133 41.4
Nn5g27072 Nelumbo nucifera HOM05D006943 ORTHO05D008565 6.3e-21 105.5 277 27.4
FAN27G2029 Fragaria x ananassa HOM05D006943 ORTHO05D008565 1.8e-20 104.0 167 36.5
FAN20G3130 Fragaria x ananassa HOM05D006943 ORTHO05D008565 2.4e-20 103.6 168 36.3
RcHm_v2.0_Chr6g0305361 Rosa chinensis HOM05D006943 ORTHO05D008565 2.4e-20 103.6 107 45.8
EL10Ac2g03684 Beta vulgaris HOM05D006943 ORTHO05D008565 3.1e-20 103.2 283 30.4
MD15G1104200 Malus domestica HOM05D006943 ORTHO05D008565 3.1e-20 103.2 307 27.0
BcaB03g12686 Brassica carinata HOM05D006943 ORTHO05D008565 5.3e-20 102.4 305 27.5
FAN15G2754 Fragaria x ananassa HOM05D006943 ORTHO05D008565 5.3e-20 102.4 165 35.8
Aqoxy7G02511 Aquilegia oxysepala HOM05D006943 ORTHO05D008565 6.9e-20 102.1 261 28.0
arahy.Tifrunner.gnm1.ann1.HML22G Arachis hypogaea HOM05D006943 ORTHO05D008565 1.2e-19 101.3 225 31.6
MSTRG.13929 Avicennia marina HOM05D006943 ORTHO05D008565 1.2e-19 101.3 97 51.5
MSTRG.13940 Avicennia marina HOM05D006943 ORTHO05D008565 2.0e-19 100.5 97 50.5
Glyma.14G138000 Glycine max HOM05D006943 ORTHO05D008565 3.4e-19 99.8 302 30.8
Hund03260 Selenicereus undatus HOM05D006943 ORTHO05D008565 1.7e-18 97.4 223 34.5
CsaV3_3G047250 Cucumis sativus L. HOM05D006943 ORTHO05D008565 3.8e-18 96.3 319 28.5
MELO3C003604.2 Cucumis melo HOM05D006943 ORTHO05D008565 1.9e-17 94.0 306 28.8
MD08G1124900 Malus domestica HOM05D006943 ORTHO05D008565 1.9e-17 94.0 305 26.9
CDE02G0425 Ceratophyllum demersum HOM05D006943 ORTHO05D008565 2.1e-16 90.5 271 28.0
ClCG05G026350 Citrullus lanatus HOM05D006943 ORTHO05D008565 3.6e-16 89.7 296 28.4
ATR0626G281 Amborella trichopoda HOM05D006943 ORTHO05D008565 6.7e-15 85.5 138 34.1
HPP92_021992 Vanilla planifolia HOM05D006943 ORTHO05D008565 1.5e-14 84.3 77 45.5
MBI16_g00837_MAGBIO Magnolia biondii HOM05D006943 ORTHO05D008565 3.3e-14 83.2 132 34.8
CSS0045137 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 6.3e-13 79.0 190 32.6
Atru.chr6.219 Acer truncatum HOM05D006943 ORTHO05D008565 1.4e-12 77.8 67 50.7
Actinidia03335 Actinidia chinensis HOM05D006943 ORTHO05D008565 2.4e-12 77.0 50 70.0
PSO170G5679 Papaver somniferum HOM05D006943 ORTHO05D008565 5.9e-11 72.4 77 39.0
PSO063G4511 Papaver somniferum HOM05D006943 ORTHO05D008565 7.7e-11 72.0 77 39.0
VMungo0720G0266 Vigna mungo HOM05D006943 ORTHO05D008565 3.8e-10 69.7 105 33.3
CSS0031863 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 8.0e-08 62.0 161 32.9
VMungo0331G1831 Vigna mungo HOM05D006943 ORTHO05D008565 6.7e-07 58.9 180 26.7
Prupe.5G142400 Prunus persica HOM05D002537 ORTHO05D002751 2.0e-06 57.4 99 27.3
MD14G1147800 Malus domestica HOM05D002537 ORTHO05D002751 4.4e-06 56.2 100 28.0
VMungo0540G2247 Vigna mungo HOM05D002022 ORTHO05D010195 7.5e-06 55.5 116 31.9
Medtr1g112650 Medicago truncatula HOM05D002537 ORTHO05D002751 9.7e-06 55.1 83 33.7


User provided reference genes

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