Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_002110 Daucus carota HOM05D007256 ORTHO05D009109 5.9e-82 307.4 144 100.0
GSVIVG01031300001 Vitis vinifera HOM05D007256 ORTHO05D009109 4.0e-46 188.3 153 60.1
TAR362G0938 Trochodendron aralioides HOM05D007256 ORTHO05D009109 1.3e-44 183.3 152 58.6
Ciclev10012993m.g Citrus clementina HOM05D007256 ORTHO05D009109 2.9e-44 182.2 159 58.5
Hma1.2p1_0052F.1_g030520 Hydrangea macrophylla HOM05D007256 ORTHO05D009109 3.7e-44 181.8 156 54.5
CANSAT54G0501 Cannabis sativa HOM05D007256 ORTHO05D009109 6.4e-44 181.0 153 60.8
Nn4g25434 Nelumbo nucifera HOM05D007256 ORTHO05D009109 8.3e-44 180.6 150 60.0
QL03p009202 Quercus lobata HOM05D007256 ORTHO05D009109 1.9e-43 179.5 153 56.9
QL03p009011 Quercus lobata HOM05D007256 ORTHO05D009109 3.2e-43 178.7 153 56.9
Sopen01g044450 Solanum pennellii HOM05D007256 ORTHO05D009109 3.2e-43 178.7 153 58.2
CsaV3_1G037970 Cucumis sativus L. HOM05D007256 ORTHO05D009109 4.1e-43 178.3 158 56.3
Solyc01g100990.3 Solanum lycopersicum HOM05D007256 ORTHO05D009109 1.6e-42 176.4 153 57.5
MD12G1202300 Malus domestica HOM05D007256 ORTHO05D009109 2.7e-42 175.6 145 57.2
Manes.08G108700 Manihot esculenta HOM05D007256 ORTHO05D009109 3.5e-42 175.3 157 56.7
RcHm_v2.0_Chr3g0458031 Rosa chinensis HOM05D007256 ORTHO05D009109 7.8e-42 174.1 151 57.6
Lsat_1_v5_gn_2_17440 Lactuca sativa HOM05D007256 ORTHO05D009109 1.0e-41 173.7 152 57.2
TWI12G0874 Tripterygium wilfordii HOM05D007256 ORTHO05D009109 1.0e-41 173.7 158 55.7
Haze_04019 Corylus avellana HOM05D007256 ORTHO05D009109 1.7e-41 172.9 153 56.2
ECA238G0534 Erigeron canadensis HOM05D007256 ORTHO05D009109 3.0e-41 172.2 159 52.2
Nitab4.5_0002783g0030 Nicotiana tabacum HOM05D007256 ORTHO05D009109 3.0e-41 172.2 150 55.3
Prupe.6G307100 Prunus persica HOM05D007256 ORTHO05D009109 3.9e-41 171.8 151 57.0
FAN09G0386 Fragaria x ananassa HOM05D007256 ORTHO05D009109 5.0e-41 171.4 151 56.3
Oeu060662.1 Olea europaea HOM05D007256 ORTHO05D009109 6.6e-41 171.0 160 55.6
Atru.chr12.1603 Acer truncatum HOM05D007256 ORTHO05D009109 8.6e-41 170.6 175 50.9
Nitab4.5_0005710g0050 Nicotiana tabacum HOM05D007256 ORTHO05D009109 8.6e-41 170.6 149 57.0
Peaxi162Scf00357g00431 Petunia axillaris HOM05D007256 ORTHO05D009109 8.6e-41 170.6 150 56.7
CAN.G1374.8 Capsicum annuum HOM05D007256 ORTHO05D009109 2.5e-40 169.1 149 55.0
ClCG03G017800 Citrullus lanatus HOM05D007256 ORTHO05D009109 3.3e-40 168.7 155 54.8
PSO761G0366 Papaver somniferum HOM05D007256 ORTHO05D009109 3.3e-40 168.7 154 55.8
PGSC0003DMG400002748 Solanum tuberosum HOM05D007256 ORTHO05D009109 4.3e-40 168.3 149 55.0
FvH4_6g08160 Fragaria vesca HOM05D007256 ORTHO05D009109 7.3e-40 167.5 148 54.7
FAN02G0906 Fragaria x ananassa HOM05D007256 ORTHO05D009109 7.3e-40 167.5 151 55.6
HanXRQChr14g0433581 Helianthus annuus HOM05D007256 ORTHO05D009109 2.1e-39 166.0 149 53.7
Potri.013G004801 Populus trichocarpa HOM05D007256 ORTHO05D009109 2.1e-39 166.0 156 56.4
QL03p009259 Quercus lobata HOM05D007256 ORTHO05D009109 2.8e-39 165.6 153 54.9
PSO210G0513 Papaver somniferum HOM05D007256 ORTHO05D009109 8.1e-39 164.1 154 53.2
CiPaw.07G034000 Carya illinoinensis HOM05D007256 ORTHO05D009109 1.4e-38 163.3 150 54.7
MELO3C015247.2 Cucumis melo HOM05D000487 ORTHO05D000405 1.8e-38 162.9 154 55.2
AUR62006795 Chenopodium quinoa HOM05D007256 ORTHO05D009109 2.3e-38 162.5 154 53.9
Duzib177G1002 Durio zibethinus HOM05D007256 ORTHO05D009109 2.3e-38 162.5 152 54.6
Sabra13G0003900 Salix brachista HOM05D007256 ORTHO05D009109 2.3e-38 162.5 158 55.1
Thecc.05G327400 Theobroma cacao HOM05D007256 ORTHO05D009109 3.1e-38 162.2 151 53.6
Aqoxy2G02591 Aquilegia oxysepala HOM05D007256 ORTHO05D009109 4.0e-38 161.8 149 55.0
Gohir.A13G030200 Gossypium hirsutum HOM05D007256 ORTHO05D009109 6.8e-38 161.0 150 53.3
Cfa006739 Carpinus fangiana HOM05D007256 ORTHO05D009109 8.9e-38 160.6 153 54.2
Eucgr.B01795 Eucalyptus grandis HOM05D007256 ORTHO05D009109 2.6e-37 159.1 155 55.5
Gohir.D13G028200 Gossypium hirsutum HOM05D007256 ORTHO05D009109 2.6e-37 159.1 150 52.7
Gorai.013G032200 Gossypium raimondii HOM05D007256 ORTHO05D009109 2.6e-37 159.1 150 52.7
FAN14G3866 Fragaria x ananassa HOM05D007256 ORTHO05D009109 3.4e-37 158.7 149 53.7
Migut.B00859 Erythranthe guttata HOM05D007256 ORTHO05D009109 1.3e-36 156.8 158 53.8
Duzib177G0019 Durio zibethinus HOM05D007256 ORTHO05D009109 3.7e-36 155.2 157 49.7
Cc02_g35540 Coffea canephora HOM05D007256 ORTHO05D009109 6.4e-36 154.5 160 51.2
COL.COLO4_05498 Corchorus olitorius HOM05D007256 ORTHO05D009109 6.4e-36 154.5 149 54.4
Lalb_Chr02g0147641 Lupinus albus HOM05D007256 ORTHO05D009109 6.4e-36 154.5 140 52.1
SGA_v2.0_scaffold438G51636 Striga asiatica HOM05D007256 ORTHO05D009109 6.4e-36 154.5 154 52.6
MSTRG.20366 Avicennia marina HOM05D007256 ORTHO05D009109 8.3e-36 154.1 161 49.7
Phvul.007G203900 Phaseolus vulgaris HOM05D007256 ORTHO05D009109 8.3e-36 154.1 145 55.2
Zm00001eb333750 Zea mays HOM05D007256 ORTHO05D009109 2.4e-35 152.5 169 50.9
Cpa.g.sc48.207 Carica papaya HOM05D007256 ORTHO05D009109 5.4e-35 151.4 144 53.5
VMungo0720G0365 Vigna mungo HOM05D007256 ORTHO05D009109 5.4e-35 151.4 145 54.5
AL6G38610 Arabidopsis lyrata HOM05D007256 ORTHO05D009109 7.1e-35 151.0 150 51.3
Hund07289 Selenicereus undatus HOM05D007256 ORTHO05D009109 7.1e-35 151.0 240 38.3
EL10Ac4g09530 Beta vulgaris HOM05D007256 ORTHO05D009109 9.2e-35 150.6 153 51.6
Lj5g0000046 Lotus japonicus HOM05D007256 ORTHO05D009109 2.1e-34 149.4 156 50.0
Medtr1g084750 Medicago truncatula HOM05D007256 ORTHO05D009109 3.5e-34 148.7 144 50.0
arahy.Tifrunner.gnm1.ann1.H7RZSB Arachis hypogaea HOM05D007256 ORTHO05D009109 1.0e-33 147.1 157 49.7
arahy.Tifrunner.gnm1.ann1.Q851GZ Arachis hypogaea HOM05D007256 ORTHO05D009109 1.0e-33 147.1 157 49.7
SalBow7G1589 Salvia bowleyana HOM05D007256 ORTHO05D009109 1.3e-33 146.7 178 44.9
Sed0013353 Sechium edule HOM05D007256 ORTHO05D009109 1.3e-33 146.7 149 49.0
A09p05700 Brassica napus HOM05D007256 ORTHO05D009109 8.6e-33 144.1 155 52.3
Thhalv10005088m.g Eutrema salsugineum HOM05D007256 ORTHO05D009109 8.6e-33 144.1 148 50.0
Gorai.001G184000 Gossypium raimondii HOM05D007256 ORTHO05D009109 1.1e-32 143.7 144 51.4
TPR.G2616 Trifolium pratense HOM05D007256 ORTHO05D009109 3.3e-32 142.1 144 48.6
BcaC04g23634 Brassica carinata HOM05D007256 ORTHO05D009109 4.3e-32 141.7 152 52.6
C09p06290 Brassica napus HOM05D007256 ORTHO05D009109 4.3e-32 141.7 152 52.6
THA.LOC104821748 Tarenaya hassleriana HOM05D007256 ORTHO05D009109 9.5e-32 140.6 153 52.3
BcaB04g19715 Brassica carinata HOM05D007256 ORTHO05D009109 1.6e-31 139.8 153 51.0
Ca_10190_v3 Cicer arietinum L. HOM05D007256 ORTHO05D009109 2.1e-31 139.4 149 49.0
Glyma.10G144700 Glycine max HOM05D007256 ORTHO05D009109 2.1e-31 139.4 146 48.6
Aa31LG11G9900 Aethionema arabicum HOM05D007256 ORTHO05D009109 2.8e-31 139.0 153 51.0
unitig_699.g19800 Utricularia gibba HOM05D007256 ORTHO05D009109 2.8e-31 139.0 176 46.6
AT5G26749 Arabidopsis thaliana HOM05D007256 ORTHO05D009109 4.7e-31 138.3 172 44.2
Os01g0252200 Oryza sativa ssp. japonica HOM05D007256 ORTHO05D009109 6.2e-31 137.9 177 45.2
SEGI_23053 Sequoiadendron giganteum HOM05D007256 ORTHO05D009109 8.1e-31 137.5 156 46.8
CDE08G0276 Ceratophyllum demersum HOM05D007256 ORTHO05D009109 3.4e-29 132.1 149 49.7
BraA09t36210Z Brassica rapa HOM05D007256 ORTHO05D009109 4.4e-29 131.7 171 46.2
Sp2g21240 Schrenkiella parvula HOM05D007256 ORTHO05D009109 7.6e-29 131.0 149 47.7
TPR.G2644 Trifolium pratense HOM05D007256 ORTHO05D009109 2.9e-28 129.0 152 45.4
Psat1g134200 Pisum sativum HOM05D007256 ORTHO05D009109 3.8e-28 128.6 149 45.6
BolC9t53549H Brassica oleracea HOM05D007256 ORTHO05D009109 1.1e-27 127.1 169 46.2
HPP92_001218 Vanilla planifolia HOM05D007256 ORTHO05D009109 1.2e-26 123.6 152 45.4
Pp3c18_1910 Physcomitrium patens HOM05D007256 ORTHO05D009109 7.8e-26 120.9 148 45.9
FAN05G3272 Fragaria x ananassa HOM05D000487 ORTHO05D000405 7.3e-24 114.4 95 58.9
PGR042G2181 Punica granatum HOM05D007256 ORTHO05D009109 9.6e-24 114.0 91 58.2
Sc09g0002500 Simmondsia chinensis HOM05D007256 ORTHO05D009109 2.8e-23 112.5 86 61.6
vmacro19770 Vaccinium macrocarpon HOM05D007256 ORTHO05D009109 2.8e-23 112.5 241 32.8
Mapoly0054s0011 Marchantia polymorpha HOM05D007256 ORTHO05D009109 8.1e-23 110.9 147 40.8
ATR0693G354 Amborella trichopoda HOM05D007256 ORTHO05D009109 4.0e-22 108.6 115 50.4
Carub.0006s2440 Capsella rubella HOM05D007256 ORTHO05D009109 2.2e-20 102.8 111 47.7
Gohir.D01G139700 Gossypium hirsutum HOM05D007256 ORTHO05D009109 2.9e-20 102.4 122 44.3
Aqoxy4G00797 Aquilegia oxysepala HOM05D007256 ORTHO05D009109 5.1e-17 91.7 144 37.5
Rhsim05G0121300 Rhododendron simsii HOM05D007256 ORTHO05D009109 3.4e-13 79.0 70 57.1
Ah.10g027130 Amaranthus hybridus HOM05D007256 ORTHO05D009109 5.8e-13 78.2 71 56.3
HPP92_001189 Vanilla planifolia HOM05D007256 ORTHO05D009109 6.4e-12 74.7 41 70.7
CARHR186830 Cardamine hirsuta HOM05D007256 ORTHO05D009109 1.1e-11 73.9 47 70.2
SHI06526 Sapria himalayana HOM05D007256 ORTHO05D009109 2.4e-11 72.8 42 69.0
Nitab4.5_0000185g0380 Nicotiana tabacum HOM05D007256 ORTHO05D009109 5.6e-08 61.6 37 70.3
Gohir.D01G148000 Gossypium hirsutum HOM05D002544 ORTHO05D009109 2.4e-06 56.2 69 46.4
Glyma.20G093702 Glycine max HOM05D007256 ORTHO05D009109 9.0e-06 54.3 55 47.3


User provided reference genes

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