Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre16.g683793 Chlamydomonas reinhardtii HOM05D004159 ORTHO05D005858 0.0e+00 1157.9 839 100.0
SMO356G0182 Selaginella moellendorffii HOM05D004159 ORTHO05D005858 1.7e-136 491.1 641 44.6
SEGI_02382 Sequoiadendron giganteum HOM05D004159 ORTHO05D005858 4.7e-131 473.0 628 43.5
AagrBONN_evm.TU.Sc2ySwM_362.1908 Anthoceros agrestis HOM05D004159 ORTHO05D005858 1.5e-129 468.0 738 41.7
Nn3g16747 Nelumbo nucifera HOM05D004159 ORTHO05D005858 1.2e-126 458.4 744 39.4
Mapoly0138s0023 Marchantia polymorpha HOM05D004159 ORTHO05D005858 1.3e-125 454.9 632 42.7
Pp3c3_23250 Physcomitrium patens HOM05D004159 ORTHO05D005858 5.1e-125 453.0 755 39.7
CBR_g38896 Chara braunii HOM05D004159 ORTHO05D005858 8.6e-125 452.2 782 52.2
Peaxi162Scf00700g00427 Petunia axillaris HOM05D004159 ORTHO05D005858 8.6e-125 452.2 632 42.2
TAR629G3285 Trochodendron aralioides HOM05D004159 ORTHO05D005858 5.6e-124 449.5 626 42.3
Aqoxy5G03802 Aquilegia oxysepala HOM05D004159 ORTHO05D005858 7.3e-124 449.1 626 42.7
TAR371G0318 Trochodendron aralioides HOM05D004159 ORTHO05D005858 7.3e-124 449.1 626 43.1
MBI16_g23841_MAGBIO Magnolia biondii HOM05D004159 ORTHO05D005858 1.6e-123 448.0 626 42.7
Solyc07g047670.3 Solanum lycopersicum HOM05D004159 ORTHO05D005858 3.6e-123 446.8 632 42.2
TWI56G0312 Tripterygium wilfordii HOM05D004159 ORTHO05D005858 6.2e-123 446.0 738 38.3
Potri.004G121400 Populus trichocarpa HOM05D004159 ORTHO05D005858 1.4e-122 444.9 632 41.5
CSS0048893 Camellia sinensis var. sinensis HOM05D004159 ORTHO05D005858 2.4e-122 444.1 628 41.9
Rhsim10G0017800 Rhododendron simsii HOM05D004159 ORTHO05D005858 3.1e-122 443.7 625 42.2
Os03g0699200 Oryza sativa ssp. japonica HOM05D004159 ORTHO05D005858 4.0e-122 443.4 645 42.3
HanXRQChr14g0462651 Helianthus annuus HOM05D004159 ORTHO05D005858 5.2e-122 443.0 632 42.1
Aa31LG11G15290 Aethionema arabicum HOM05D004159 ORTHO05D005858 8.9e-122 442.2 584 42.8
Actinidia09406 Actinidia chinensis HOM05D004159 ORTHO05D005858 1.2e-121 441.8 626 42.0
AT5G14520 Arabidopsis thaliana HOM05D004159 ORTHO05D005858 2.6e-121 440.7 741 37.7
Thhalv10013046m.g Eutrema salsugineum HOM05D004159 ORTHO05D005858 2.6e-121 440.7 746 37.7
BcaB01g05107 Brassica carinata HOM05D004159 ORTHO05D005858 3.4e-121 440.3 747 37.9
HanXRQChr04g0114031 Helianthus annuus HOM05D004159 ORTHO05D005858 3.4e-121 440.3 632 41.9
Hma1.2p1_0078F.1_g040070 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 3.4e-121 440.3 626 41.5
Sp6g29490 Schrenkiella parvula HOM05D004159 ORTHO05D005858 3.4e-121 440.3 746 37.7
Sabra04G0067000 Salix brachista HOM05D004159 ORTHO05D005858 4.4e-121 439.9 633 41.4
AL6G25270 Arabidopsis lyrata HOM05D004159 ORTHO05D005858 5.8e-121 439.5 631 41.2
CARHR198790 Cardamine hirsuta HOM05D004159 ORTHO05D005858 1.3e-120 438.3 747 37.5
C03p07700 Brassica napus HOM05D004159 ORTHO05D005858 1.7e-120 438.0 748 37.8
DCAR_021719 Daucus carota HOM05D004159 ORTHO05D005858 2.2e-120 437.6 632 42.7
PGR142G2553 Punica granatum HOM05D004159 ORTHO05D005858 2.2e-120 437.6 627 41.6
GSVIVG01032412001 Vitis vinifera HOM05D004159 ORTHO05D005858 2.2e-120 437.6 627 41.5
ECA240G1354 Erigeron canadensis HOM05D004159 ORTHO05D005858 2.9e-120 437.2 631 41.0
BolC3t13270H Brassica oleracea HOM05D004159 ORTHO05D005858 4.9e-120 436.4 748 37.8
Nitab4.5_0006221g0020 Nicotiana tabacum HOM05D004159 ORTHO05D005858 4.9e-120 436.4 659 41.1
Eucgr.I01748 Eucalyptus grandis HOM05D004159 ORTHO05D005858 6.4e-120 436.0 636 41.8
PGSC0003DMG400006122 Solanum tuberosum HOM05D004159 ORTHO05D005858 8.4e-120 435.6 647 41.1
CDE07G0971 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 1.1e-119 435.3 627 41.0
Lj7C599T6 Lonicera japonica HOM05D004159 ORTHO05D005858 1.1e-119 435.3 627 41.5
THA.LOC104824006 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 1.1e-119 435.3 738 37.4
Lsat_1_v5_gn_2_51000 Lactuca sativa HOM05D004159 ORTHO05D005858 1.9e-119 434.5 626 41.4
Gorai.001G264700 Gossypium raimondii HOM05D004159 ORTHO05D005858 3.2e-119 433.7 626 40.6
CANSAT64G2890 Cannabis sativa HOM05D004159 ORTHO05D005858 5.4e-119 433.0 628 41.4
Gohir.D07G229600 Gossypium hirsutum HOM05D004159 ORTHO05D005858 7.1e-119 432.6 626 40.6
ATR1132G032 Amborella trichopoda HOM05D004159 ORTHO05D005858 2.1e-118 431.0 628 41.7
Cc07_g01750 Coffea canephora HOM05D004159 ORTHO05D005858 2.1e-118 431.0 629 40.7
Zm00001eb053960 Zea mays HOM05D004159 ORTHO05D005858 2.1e-118 431.0 750 39.6
Gohir.A07G222900 Gossypium hirsutum HOM05D004159 ORTHO05D005858 4.6e-118 429.9 627 40.4
AUR62040779 Chenopodium quinoa HOM05D004159 ORTHO05D005858 6.0e-118 429.5 632 39.6
PSO017G2175 Papaver somniferum HOM05D004159 ORTHO05D005858 6.0e-118 429.5 628 41.9
Duzib264G0191 Durio zibethinus HOM05D004159 ORTHO05D005858 1.0e-117 428.7 628 40.0
Thecc.04G016700 Theobroma cacao HOM05D004159 ORTHO05D005858 1.0e-117 428.7 630 40.2
CAN.G1819.1 Capsicum annuum HOM05D004159 ORTHO05D005858 1.3e-117 428.3 636 40.6
Carub.0006s1270 Capsella rubella HOM05D004159 ORTHO05D005858 2.3e-117 427.6 615 40.8
Sed0001839 Sechium edule HOM05D004159 ORTHO05D005858 3.0e-117 427.2 625 40.5
AUR62040778 Chenopodium quinoa HOM05D004159 ORTHO05D005858 3.9e-117 426.8 632 39.2
THA.LOC104822401 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 6.6e-117 426.0 738 37.5
BraA03t10001Z Brassica rapa HOM05D004159 ORTHO05D005858 8.7e-117 425.6 749 37.1
QL02p074797 Quercus lobata HOM05D004159 ORTHO05D005858 8.7e-117 425.6 634 40.5
Duzib187G0134 Durio zibethinus HOM05D004159 ORTHO05D005858 1.1e-116 425.2 627 39.7
A03p06670 Brassica napus HOM05D004159 ORTHO05D005858 1.9e-116 424.5 747 36.9
Ciclev10014699m.g Citrus clementina HOM05D004159 ORTHO05D005858 1.9e-116 424.5 651 39.6
COL.COLO4_29105 Corchorus olitorius HOM05D004159 ORTHO05D005858 1.9e-116 424.5 634 39.4
Manes.17G112500 Manihot esculenta HOM05D004159 ORTHO05D005858 3.3e-116 423.7 626 40.6
MSTRG.20029 Avicennia marina HOM05D004159 ORTHO05D005858 4.3e-116 423.3 637 40.5
CiPaw.04G028300 Carya illinoinensis HOM05D004159 ORTHO05D005858 4.3e-116 423.3 742 37.6
TPR.G1071 Trifolium pratense HOM05D004159 ORTHO05D005858 5.6e-116 422.9 631 40.3
VMungo0720G1997 Vigna mungo HOM05D004159 ORTHO05D005858 9.6e-116 422.2 626 39.6
Nitab4.5_0003930g0060 Nicotiana tabacum HOM05D004159 ORTHO05D005858 2.8e-115 420.6 631 41.2
Cpa.g.sc108.65 Carica papaya HOM05D004159 ORTHO05D005858 4.7e-115 419.9 757 36.9
Lalb_Chr02g0160481 Lupinus albus HOM05D004159 ORTHO05D005858 4.7e-115 419.9 637 39.4
Haze_14736 Corylus avellana HOM05D004159 ORTHO05D005858 1.1e-114 418.7 634 41.0
Phvul.007G070900 Phaseolus vulgaris HOM05D004159 ORTHO05D005858 1.4e-114 418.3 626 39.6
Sed0003581 Sechium edule HOM05D004159 ORTHO05D005858 1.8e-114 417.9 739 36.0
CiPaw.03G043300 Carya illinoinensis HOM05D004159 ORTHO05D005858 2.4e-114 417.5 749 37.1
Migut.N01406 Erythranthe guttata HOM05D004159 ORTHO05D005858 2.4e-114 417.5 642 40.3
Lj1g0017236 Lotus japonicus HOM05D004159 ORTHO05D005858 2.4e-114 417.5 640 40.2
Medtr7g100040 Medicago truncatula HOM05D004159 ORTHO05D005858 2.4e-114 417.5 632 40.2
MCO04G526 Micromonas commoda HOM05D004159 ORTHO05D005858 2.4e-114 417.5 565 42.7
Atru.chr6.2388 Acer truncatum HOM05D004159 ORTHO05D005858 5.3e-114 416.4 633 39.7
arahy.Tifrunner.gnm1.ann1.M4LD34 Arachis hypogaea HOM05D004159 ORTHO05D005858 5.3e-114 416.4 632 39.7
SGA_v2.0_scaffold32G13248 Striga asiatica HOM05D004159 ORTHO05D005858 6.9e-114 416.0 635 40.3
Cfa007372 Carpinus fangiana HOM05D004159 ORTHO05D005858 1.2e-113 415.2 632 40.7
Lalb_Chr06g0175751 Lupinus albus HOM05D004159 ORTHO05D005858 1.5e-113 414.8 635 39.2
Oeu048622.3 Olea europaea HOM05D004159 ORTHO05D005858 1.5e-113 414.8 620 41.0
ClCG01G013750 Citrullus lanatus HOM05D004159 ORTHO05D005858 2.0e-113 414.5 627 39.7
Migut.B00156 Erythranthe guttata HOM05D004159 ORTHO05D005858 2.6e-113 414.1 641 40.4
EL10Ac8g19455 Beta vulgaris HOM05D004159 ORTHO05D005858 9.9e-113 412.1 632 38.3
SalBow6G0855 Salvia bowleyana HOM05D004159 ORTHO05D005858 9.9e-113 412.1 637 40.2
Ah.09g231680 Amaranthus hybridus HOM05D004159 ORTHO05D005858 1.3e-112 411.8 749 35.2
Psat0s1782g0040 Pisum sativum HOM05D004159 ORTHO05D005858 1.3e-112 411.8 641 39.2
Glyma.19G232500 Glycine max HOM05D004159 ORTHO05D005858 1.7e-112 411.4 626 40.6
LjContig00272g0012452 Lotus japonicus HOM05D004159 ORTHO05D005858 2.9e-112 410.6 744 36.7
vmacro05861 Vaccinium macrocarpon HOM05D004159 ORTHO05D005858 1.4e-111 408.3 781 36.5
Hund22314 Selenicereus undatus HOM05D004159 ORTHO05D005858 4.2e-111 406.8 632 38.4
Ca_26485_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 7.1e-111 406.0 633 39.2
Prupe.3G291100 Prunus persica HOM05D004159 ORTHO05D005858 1.0e-109 402.1 627 39.4
Glyma.03G234900 Glycine max HOM05D004159 ORTHO05D005858 1.7e-109 401.4 626 38.3
MD09G1027600 Malus domestica HOM05D004159 ORTHO05D005858 1.7e-109 401.4 633 39.0
MD17G1027600 Malus domestica HOM05D004159 ORTHO05D005858 5.1e-109 399.8 633 39.2
Lsat_1_v5_gn_4_179560 Lactuca sativa HOM05D004159 ORTHO05D005858 1.1e-108 398.7 626 37.7
unitig_21.g20810 Utricularia gibba HOM05D004159 ORTHO05D005858 5.6e-108 396.4 635 38.7
PRCOL_00002170 Prasinoderma coloniale HOM05D004159 ORTHO05D005858 6.2e-107 392.9 637 40.7
CDE06G0546 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 1.4e-106 391.7 628 40.8
PSO764G0137 Papaver somniferum HOM05D004159 ORTHO05D005858 6.9e-106 389.4 637 38.1
CsaV3_1G014060 Cucumis sativus L. HOM05D004159 ORTHO05D005858 1.5e-105 388.3 627 38.4
MELO3C004873.2 Cucumis melo HOM05D004159 ORTHO05D005858 1.1e-103 382.1 626 37.4
FvH4_3g26080 Fragaria vesca HOM05D004159 ORTHO05D005858 7.9e-102 375.9 635 38.4
FAN11G1291 Fragaria x ananassa HOM05D004159 ORTHO05D005858 7.9e-102 375.9 635 38.4
RcHm_v2.0_Chr5g0047391 Rosa chinensis HOM05D004159 ORTHO05D005858 1.0e-101 375.6 571 39.8
FAN25G3844 Fragaria x ananassa HOM05D004159 ORTHO05D005858 2.3e-101 374.4 635 38.3
Prupe.8G015200 Prunus persica HOM05D004159 ORTHO05D005858 1.5e-100 371.7 628 37.4
Prupe.8G015700 Prunus persica HOM05D004159 ORTHO05D005858 1.5e-100 371.7 627 37.3
Dinv33444 Davidia involucrata HOM05D004159 ORTHO05D005858 4.3e-100 370.2 687 35.7
FAN16G1867 Fragaria x ananassa HOM05D004159 ORTHO05D005858 1.6e-99 368.2 635 38.0
ClCG11G000220 Citrullus lanatus HOM05D004159 ORTHO05D005858 2.1e-99 367.9 632 37.7
FAN21G3616 Fragaria x ananassa HOM05D004159 ORTHO05D005858 4.8e-99 366.7 635 37.8
Prupe.4G071200 Prunus persica HOM05D004159 ORTHO05D005858 4.8e-99 366.7 554 39.0
AUR62029204 Chenopodium quinoa HOM05D004159 ORTHO05D005858 3.1e-98 364.0 632 36.2
Medtr8g010330 Medicago truncatula HOM05D004159 ORTHO05D005858 1.5e-97 361.7 620 36.9
PSO478G0945 Papaver somniferum HOM05D004159 ORTHO05D005858 1.3e-96 358.6 628 37.9
HPP92_005716 Vanilla planifolia HOM05D004159 ORTHO05D005858 1.1e-95 355.5 626 38.3
Nitab4.5_0008375g0010 Nicotiana tabacum HOM05D004159 ORTHO05D005858 5.5e-95 353.2 545 38.9
Sopen07g024120 Solanum pennellii HOM05D004159 ORTHO05D005858 1.6e-94 351.7 554 39.0
ECA248G2726 Erigeron canadensis HOM05D004159 ORTHO05D005858 3.6e-78 297.4 632 34.3
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 1.9e-71 275.0 657 33.9
Haze_26879 Corylus avellana HOM05D004159 ORTHO05D005858 2.5e-71 274.6 628 33.3
arahy.Tifrunner.gnm1.ann1.M9AKWN Arachis hypogaea HOM05D004159 ORTHO05D005858 3.6e-70 270.8 499 35.7
Ca_22754_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 8.8e-69 266.2 256 53.5
Hma1.2p1_2964F.1_g330970 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 2.0e-68 265.0 228 56.1
Dinv35104 Davidia involucrata HOM05D004159 ORTHO05D005858 2.8e-67 261.2 498 36.3
TPR.G27000 Trifolium pratense HOM05D004159 ORTHO05D005858 2.0e-65 255.0 491 33.2
Hma1.2p1_0999F.1_g246250 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.6e-54 218.8 256 46.9
Sc03g0007500 Simmondsia chinensis HOM05D004159 ORTHO05D005858 3.6e-54 217.6 406 36.2
RcHm_v2.0_Chr5g0047861 Rosa chinensis HOM05D004159 ORTHO05D036595 2.9e-48 198.0 184 55.4
Sc03g0007510 Simmondsia chinensis HOM05D004159 ORTHO05D005858 1.6e-41 175.6 161 57.8
Psat1g081880 Pisum sativum HOM05D004159 ORTHO05D019349 1.2e-36 159.5 162 47.5
Zm00001eb053940 Zea mays HOM05D004159 ORTHO05D005858 9.2e-34 149.8 368 30.7
Gohir.D06G181800 Gossypium hirsutum HOM05D004159 ORTHO05D021100 4.7e-30 137.5 111 57.7
Gohir.D13G037150 Gossypium hirsutum HOM05D004159 ORTHO05D021100 3.4e-28 131.3 112 55.4
Gorai.013G041700 Gossypium raimondii HOM05D004159 ORTHO05D005858 7.5e-28 130.2 112 54.5
MD10G1043900 Malus domestica HOM05D004159 ORTHO05D036595 2.7e-25 121.7 127 50.4
Hma1.2p1_0999F.1_g246240 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 3.5e-25 121.3 127 47.2
BcaB01g05108 Brassica carinata HOM05D004159 ORTHO05D005858 3.3e-23 114.8 261 30.7
SEGI_01298 Sequoiadendron giganteum HOM05D004159 ORTHO05D021100 4.4e-20 104.4 67 73.1
Aa31sc84G60 Aethionema arabicum HOM05D004159 ORTHO05D007259 1.5e-15 89.4 177 33.9
RcHm_v2.0_Chr5g0047691 Rosa chinensis HOM05D004159 ORTHO05D036595 3.3e-15 88.2 83 54.2
Medtr6g022610 Medicago truncatula HOM05D004159 ORTHO05D005858 8.9e-13 80.1 72 54.2
HanXRQChr05g0138871 Helianthus annuus HOM05D004159 ORTHO05D005858 1.5e-12 79.3 56 62.5
PSO675G5574 Papaver somniferum HOM05D004159 ORTHO05D302046 7.6e-12 77.0 165 33.3
Lj2g0001382 Lotus japonicus HOM05D004159 ORTHO05D235994 1.3e-11 76.3 56 57.1
Medtr6g022550 Medicago truncatula HOM05D004159 ORTHO05D005858 1.7e-11 75.9 62 54.8
Actinidia33332 Actinidia chinensis HOM05D004159 ORTHO05D002141 8.3e-11 73.6 59 50.8
MD13G1107200 Malus domestica HOM05D004159 ORTHO05D021100 1.4e-10 72.8 64 53.1
Ca_31061_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 4.1e-10 71.2 67 52.2


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