Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre09.g401663 Chlamydomonas reinhardtii HOM05D004958 ORTHO05D005983 2.1e-155 552.7 372 100.0
Solyc06g073120.4 Solanum lycopersicum HOM05D004958 ORTHO05D005983 1.1e-39 168.3 222 43.2
SGA_v2.0_scaffold196G40881 Striga asiatica HOM05D004958 ORTHO05D005983 3.2e-39 166.8 224 44.2
Sopen06g029470 Solanum pennellii HOM05D004958 ORTHO05D005983 4.2e-39 166.4 223 42.2
PGSC0003DMG400026921 Solanum tuberosum HOM05D004958 ORTHO05D005983 5.5e-39 166.0 223 42.2
Hund11528 Selenicereus undatus HOM05D004958 ORTHO05D005983 4.6e-38 162.9 232 42.7
Mapoly0004s0034 Marchantia polymorpha HOM05D004958 ORTHO05D005983 6.1e-38 162.5 223 45.7
PSO782G2900 Papaver somniferum HOM05D004958 ORTHO05D005983 1.0e-37 161.8 221 45.2
PSO478G4928 Papaver somniferum HOM05D004958 ORTHO05D005983 1.8e-37 161.0 221 45.7
Migut.E01294 Erythranthe guttata HOM05D004958 ORTHO05D005983 2.3e-37 160.6 224 42.9
Nitab4.5_0001586g0220 Nicotiana tabacum HOM05D004958 ORTHO05D005983 6.7e-37 159.1 220 43.2
Nitab4.5_0003994g0020 Nicotiana tabacum HOM05D004958 ORTHO05D005983 1.5e-36 157.9 216 43.5
Nitab4.5_0002553g0040 Nicotiana tabacum HOM05D004958 ORTHO05D005983 1.9e-36 157.5 220 43.2
Pp3c15_19260 Physcomitrium patens HOM05D004958 ORTHO05D005983 1.9e-36 157.5 223 45.3
MSTRG.1893 Avicennia marina HOM05D004958 ORTHO05D005983 3.3e-36 156.8 227 42.7
Os09g0525200 Oryza sativa ssp. japonica HOM05D004958 ORTHO05D005983 3.3e-36 156.8 219 45.2
CAN.G65.155 Capsicum annuum HOM05D004958 ORTHO05D005983 5.7e-36 156.0 228 40.4
Lsat_1_v5_gn_6_87641 Lactuca sativa HOM05D004958 ORTHO05D005983 2.8e-35 153.7 219 42.5
Nitab4.5_0003113g0020 Nicotiana tabacum HOM05D004958 ORTHO05D005983 4.8e-35 152.9 223 41.7
BolC8t52265H Brassica oleracea HOM05D004958 ORTHO05D005983 8.2e-35 152.1 177 51.4
Eucgr.D01919 Eucalyptus grandis HOM05D004958 ORTHO05D005983 8.2e-35 152.1 223 41.7
SMO228G0196 Selaginella moellendorffii HOM05D004958 ORTHO05D005983 1.1e-34 151.8 212 42.0
DCAR_008420 Daucus carota HOM05D004958 ORTHO05D005983 1.4e-34 151.4 219 42.9
Sed0017231 Sechium edule HOM05D004958 ORTHO05D005983 1.4e-34 151.4 221 42.1
A09p63740 Brassica napus HOM05D004958 ORTHO05D005983 1.8e-34 151.0 177 50.8
BraA09t41722Z Brassica rapa HOM05D004958 ORTHO05D005983 1.8e-34 151.0 177 50.8
Potri.001G110000 Populus trichocarpa HOM05D004958 ORTHO05D005983 1.8e-34 151.0 229 42.4
AagrBONN_evm.TU.Sc2ySwM_362.2285 Anthoceros agrestis HOM05D004958 ORTHO05D005983 2.4e-34 150.6 220 42.7
CSS0008368 Camellia sinensis var. sinensis HOM05D004958 ORTHO05D005983 4.1e-34 149.8 224 40.6
Lj3g0000848 Lotus japonicus HOM05D004958 ORTHO05D005983 4.1e-34 149.8 221 42.5
Duzib068G0251 Durio zibethinus HOM05D004958 ORTHO05D005983 6.9e-34 149.1 218 41.7
Hma1.2p1_0514F.1_g170070 Hydrangea macrophylla HOM05D004958 ORTHO05D005983 6.9e-34 149.1 224 41.1
Actinidia27408 Actinidia chinensis HOM05D004958 ORTHO05D005983 1.5e-33 147.9 224 42.0
ECA240G3664 Erigeron canadensis HOM05D004958 ORTHO05D005983 1.5e-33 147.9 219 42.5
Peaxi162Scf01294g00034 Petunia axillaris HOM05D004958 ORTHO05D005983 2.0e-33 147.5 223 40.8
VMungo0331G1538 Vigna mungo HOM05D004958 ORTHO05D005983 2.6e-33 147.1 230 39.1
ClCG08G000800 Citrullus lanatus HOM05D004958 ORTHO05D005983 3.4e-33 146.7 219 40.6
Gohir.D11G021000 Gossypium hirsutum HOM05D004958 ORTHO05D005983 3.4e-33 146.7 218 40.8
AL1G24110 Arabidopsis lyrata HOM05D004958 ORTHO05D005983 4.5e-33 146.4 181 49.2
C08p47240 Brassica napus HOM05D004958 ORTHO05D005983 4.5e-33 146.4 171 50.3
Gorai.007G022300 Gossypium raimondii HOM05D004958 ORTHO05D005983 4.5e-33 146.4 218 40.8
Sp1g11240 Schrenkiella parvula HOM05D004958 ORTHO05D005983 4.5e-33 146.4 225 43.1
HPP92_003759 Vanilla planifolia HOM05D004958 ORTHO05D005983 4.5e-33 146.4 221 44.3
Ciclev10021851m.g Citrus clementina HOM05D004958 ORTHO05D005983 5.9e-33 146.0 218 41.3
FvH4_7g07500 Fragaria vesca HOM05D004958 ORTHO05D005983 5.9e-33 146.0 220 40.5
PGR031G1609 Punica granatum HOM05D004958 ORTHO05D005983 5.9e-33 146.0 226 42.5
FvH4_3g25070 Fragaria vesca HOM05D000097 ORTHO05D005983 7.7e-33 145.6 219 42.5
FAN06G2073 Fragaria x ananassa HOM05D004958 ORTHO05D005983 7.7e-33 145.6 220 40.9
FAN10G1939 Fragaria x ananassa HOM05D004958 ORTHO05D005983 7.7e-33 145.6 220 40.9
Phvul.010G049100 Phaseolus vulgaris HOM05D004958 ORTHO05D005983 7.7e-33 145.6 230 39.1
FAN01G2068 Fragaria x ananassa HOM05D004958 ORTHO05D005983 1.0e-32 145.2 217 41.0
FAN03G3010 Fragaria x ananassa HOM05D004958 ORTHO05D005983 1.0e-32 145.2 220 40.9
MD03G1146200 Malus domestica HOM05D004958 ORTHO05D005983 1.0e-32 145.2 224 41.1
Prupe.6G131000 Prunus persica HOM05D004958 ORTHO05D005983 1.0e-32 145.2 216 42.1
Atru.chr12.1358 Acer truncatum HOM05D004958 ORTHO05D005983 1.3e-32 144.8 226 42.5
BcaB08g34261 Brassica carinata HOM05D004958 ORTHO05D005983 1.3e-32 144.8 236 41.5
Gohir.A11G021300 Gossypium hirsutum HOM05D004958 ORTHO05D005983 1.3e-32 144.8 218 40.8
GSVIVG01019856001 Vitis vinifera HOM05D004958 ORTHO05D005983 1.3e-32 144.8 224 40.2
Glyma.07G082900 Glycine max HOM05D004958 ORTHO05D005983 1.7e-32 144.4 222 41.0
Manes.01G066700 Manihot esculenta HOM05D004958 ORTHO05D005983 1.7e-32 144.4 223 40.4
SEGI_09748 Sequoiadendron giganteum HOM05D004958 ORTHO05D005983 1.7e-32 144.4 222 39.6
Thecc.03G271700 Theobroma cacao HOM05D004958 ORTHO05D005983 2.2e-32 144.1 219 39.7
Nn6g34244 Nelumbo nucifera HOM05D004958 ORTHO05D005983 2.9e-32 143.7 218 42.2
Phvul.009G080900 Phaseolus vulgaris HOM05D004958 ORTHO05D005983 3.8e-32 143.3 226 41.2
RcHm_v2.0_Chr5g0045251 Rosa chinensis HOM05D004958 ORTHO05D005983 3.8e-32 143.3 216 41.2
BcaC07g41688 Brassica carinata HOM05D004958 ORTHO05D005983 5.0e-32 142.9 170 50.0
MELO3C019927.2 Cucumis melo HOM05D004958 ORTHO05D005983 1.1e-31 141.7 220 40.5
CARHR012940 Cardamine hirsuta HOM05D004958 ORTHO05D005983 1.4e-31 141.4 216 42.1
AT1G12650 Arabidopsis thaliana HOM05D004958 ORTHO05D005983 1.9e-31 141.0 218 43.1
Ah.12g057600 Amaranthus hybridus HOM05D004958 ORTHO05D005983 2.5e-31 140.6 216 39.4
ATR0757G162 Amborella trichopoda HOM05D004958 ORTHO05D005983 2.5e-31 140.6 228 39.9
Psat0s646g0120 Pisum sativum HOM05D004958 ORTHO05D005983 2.5e-31 140.6 219 39.7
Carub.0001s1234 Capsella rubella HOM05D004958 ORTHO05D005983 5.5e-31 139.4 221 41.2
Lalb_Chr07g0189581 Lupinus albus HOM05D004958 ORTHO05D005983 5.5e-31 139.4 219 41.1
Zm00001eb103160 Zea mays HOM05D004958 ORTHO05D005983 5.5e-31 139.4 219 42.0
Aqoxy5G02043 Aquilegia oxysepala HOM05D004958 ORTHO05D005983 7.2e-31 139.0 222 41.9
Medtr5g058150 Medicago truncatula HOM05D004958 ORTHO05D005983 9.4e-31 138.7 219 38.4
Glyma.03G021100 Glycine max HOM05D004958 ORTHO05D005983 1.2e-30 138.3 241 38.2
Lalb_Chr12g0208371 Lupinus albus HOM05D004958 ORTHO05D005983 4.7e-30 136.3 221 38.9
Lalb_Chr12g0208451 Lupinus albus HOM05D004958 ORTHO05D005983 4.7e-30 136.3 221 38.9
MBI11_g40802_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 4.7e-30 136.3 220 41.4
Ca_24641_v3 Cicer arietinum L. HOM05D004958 ORTHO05D005983 6.1e-30 136.0 223 37.7
Medtr6g075250 Medicago truncatula HOM05D004958 ORTHO05D005983 7.9e-30 135.6 222 36.9
TWI81G1011 Tripterygium wilfordii HOM05D004958 ORTHO05D005983 7.9e-30 135.6 227 38.3
Ca_05359_v3 Cicer arietinum L. HOM05D004958 ORTHO05D005983 1.0e-29 135.2 219 38.4
CsaV3_5G039810 Cucumis sativus L. HOM05D004958 ORTHO05D005983 1.4e-29 134.8 251 36.3
Prupe.8G125000 Prunus persica HOM05D004958 ORTHO05D005983 5.1e-29 132.9 226 39.4
arahy.Tifrunner.gnm1.ann1.BCQ50G Arachis hypogaea HOM05D004958 ORTHO05D005983 6.7e-29 132.5 220 38.6
TPR.G27805 Trifolium pratense HOM05D004958 ORTHO05D005983 8.8e-29 132.1 219 37.9
THA.LOC104823571 Tarenaya hassleriana HOM05D004958 ORTHO05D005983 1.1e-28 131.7 213 37.6
unitig_899.g14861 Utricularia gibba HOM05D004958 ORTHO05D005983 2.6e-28 130.6 253 35.2
COL.COLO4_09338 Corchorus olitorius HOM05D001926 ORTHO05D002121 5.7e-28 129.4 222 39.2
MBI11_g41127_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 9.7e-28 128.6 177 43.5
vmacro13919 Vaccinium macrocarpon HOM05D004958 ORTHO05D005983 2.2e-27 127.5 224 37.5
EL10Ac5g12729 Beta vulgaris HOM05D004958 ORTHO05D005983 3.7e-27 126.7 217 36.4
AUR62017291 Chenopodium quinoa HOM05D004958 ORTHO05D005983 8.2e-27 125.6 164 42.1
Cc08_g14020 Coffea canephora HOM05D004958 ORTHO05D005983 1.1e-26 125.2 218 39.4
CBR_g12215 Chara braunii HOM05D004958 ORTHO05D005983 4.1e-26 123.2 169 44.4
SalBow7G2511 Salvia bowleyana HOM05D004958 ORTHO05D005983 1.2e-25 121.7 193 40.4
PRCOL_00004135 Prasinoderma coloniale HOM05D004958 ORTHO05D005983 2.6e-25 120.6 216 39.4
MBI11_g31491_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 4.5e-25 119.8 235 37.9
FAN11G1832 Fragaria x ananassa HOM05D000097 ORTHO05D005983 5.0e-24 116.3 219 37.9
CiPaw.12G097900 Carya illinoinensis HOM05D004958 ORTHO05D005983 3.2e-23 113.6 207 38.6
AUR62010651 Chenopodium quinoa HOM05D004958 ORTHO05D005983 2.1e-22 110.9 216 34.3
Aa31LG1G2030 Aethionema arabicum HOM05D004958 ORTHO05D005983 1.8e-21 107.8 174 42.0
MBI11_g41124_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 3.0e-21 107.1 162 42.0
QL12p017317 Quercus lobata HOM05D004958 ORTHO05D005983 5.2e-21 106.3 290 31.4
MBI11_g47761_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 1.1e-20 105.1 168 41.7
Sc22g0000230 Simmondsia chinensis HOM05D004958 ORTHO05D005983 1.5e-20 104.8 173 40.5
Cfa012106 Carpinus fangiana HOM05D004958 ORTHO05D005983 2.6e-20 104.0 207 37.7
Thhalv10008688m.g Eutrema salsugineum HOM05D004958 ORTHO05D005983 3.3e-20 103.6 197 40.1
MD11G1165500 Malus domestica HOM05D004958 ORTHO05D005983 9.7e-20 102.1 285 30.5
MBI04_g02075_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 1.3e-19 101.7 221 36.7
Rhsim07G0094600 Rhododendron simsii HOM05D004958 ORTHO05D005983 2.8e-19 100.5 198 36.9
vmacro12796 Vaccinium macrocarpon HOM05D004958 ORTHO05D005983 3.7e-19 100.1 284 29.2
Haze_20475 Corylus avellana HOM05D004958 ORTHO05D005983 1.2e-17 95.1 280 31.8
FAN21G2287 Fragaria x ananassa HOM05D000097 ORTHO05D000041 1.6e-17 94.7 146 40.4
Sabra01G0083200 Salix brachista HOM05D004958 ORTHO05D005983 1.7e-16 91.3 217 32.3
CDE02G4341 Ceratophyllum demersum HOM05D004958 ORTHO05D005983 6.5e-16 89.4 149 40.3
Eucgr.L01965 Eucalyptus grandis HOM05D004958 ORTHO05D005983 7.2e-15 85.9 134 40.3
Dinv39007 Davidia involucrata HOM05D004958 ORTHO05D005983 2.7e-14 84.0 131 42.7
Cfa023436 Carpinus fangiana HOM05D004958 ORTHO05D005983 3.0e-13 80.5 187 34.2
Atru.chr12.1359 Acer truncatum HOM05D004958 ORTHO05D005983 4.0e-13 80.1 148 38.5
Zm00001eb297680 Zea mays HOM05D004958 ORTHO05D005983 2.4e-10 70.9 94 42.6
SEGI_22925 Sequoiadendron giganteum HOM05D004958 ORTHO05D005983 3.1e-10 70.5 65 53.8
Aqoxy60s002 Aquilegia oxysepala HOM05D004958 ORTHO05D005983 5.3e-10 69.7 124 38.7
A09p63730 Brassica napus HOM05D007482 ORTHO05D003038 3.5e-09 67.0 68 55.9
MBI11_g32389_MAGBIO Magnolia biondii HOM05D004958 ORTHO05D005983 1.3e-08 65.1 224 30.8
Haze_08945 Corylus avellana HOM05D004958 ORTHO05D005983 2.1e-06 57.8 123 35.0


User provided reference genes

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