Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre04.g218700 Chlamydomonas reinhardtii HOM05D002824 ORTHO05D008771 2.6e-78 295.4 162 100.0
SMO358G0035 Selaginella moellendorffii HOM05D002824 ORTHO05D008771 1.2e-14 84.0 69 55.1
Ca_29478_v3 Cicer arietinum L. HOM05D002824 ORTHO05D008771 3.5e-14 82.4 66 57.6
PRCOL_00002279 Prasinoderma coloniale HOM05D002824 ORTHO05D008771 1.3e-13 80.5 64 56.2
THA.LOC104814832 Tarenaya hassleriana HOM05D002824 ORTHO05D008771 4.2e-12 75.5 73 50.7
BcaC04g21113 Brassica carinata HOM05D002824 ORTHO05D008771 7.2e-12 74.7 82 48.8
C09p35540 Brassica napus HOM05D002824 ORTHO05D008771 7.2e-12 74.7 82 48.8
BolC9t56393H Brassica oleracea HOM05D002824 ORTHO05D008771 7.2e-12 74.7 82 48.8
MD11G1244000 Malus domestica HOM05D002824 ORTHO05D008771 7.2e-12 74.7 68 47.1
BcaB05g23855 Brassica carinata HOM05D002824 ORTHO05D008771 9.5e-12 74.3 82 47.6
BraA09t38371Z Brassica rapa HOM05D002824 ORTHO05D008771 9.5e-12 74.3 82 47.6
BcaB01g01596 Brassica carinata HOM05D002824 ORTHO05D008771 1.2e-11 73.9 82 47.6
Carub.0006s3001 Capsella rubella HOM05D002824 ORTHO05D008771 1.2e-11 73.9 94 45.7
CARHR255400 Cardamine hirsuta HOM05D002824 ORTHO05D008771 1.2e-11 73.9 82 47.6
Thhalv10029051m.g Eutrema salsugineum HOM05D002824 ORTHO05D008771 1.2e-11 73.9 82 47.6
Sp6g06240 Schrenkiella parvula HOM05D002824 ORTHO05D008771 1.2e-11 73.9 82 47.6
AL6G45360 Arabidopsis lyrata HOM05D002824 ORTHO05D008771 1.6e-11 73.6 105 41.9
Duzib084G0020 Durio zibethinus HOM05D002824 ORTHO05D008771 1.6e-11 73.6 91 46.2
A09p28030 Brassica napus HOM05D002824 ORTHO05D008771 3.6e-11 72.4 117 41.0
Gohir.A12G232300 Gossypium hirsutum HOM05D002824 ORTHO05D008771 3.6e-11 72.4 99 43.4
Gohir.D12G235100 Gossypium hirsutum HOM05D002824 ORTHO05D008771 3.6e-11 72.4 99 43.4
Gorai.008G251300 Gossypium raimondii HOM05D002824 ORTHO05D008771 3.6e-11 72.4 99 43.4
Prupe.4G182400 Prunus persica HOM05D002824 ORTHO05D008771 3.6e-11 72.4 60 53.3
Aa31LG9G11000 Aethionema arabicum HOM05D002824 ORTHO05D008771 4.7e-11 72.0 78 46.2
Duzib205G1549 Durio zibethinus HOM05D002824 ORTHO05D008771 6.1e-11 71.6 92 43.5
Thecc.03G290100 Theobroma cacao HOM05D002824 ORTHO05D008771 1.4e-10 70.5 91 44.0
Nitab4.5_0000676g0190 Nicotiana tabacum HOM05D002824 ORTHO05D008771 1.8e-10 70.1 66 48.5
Nitab4.5_0005206g0060 Nicotiana tabacum HOM05D002824 ORTHO05D008771 1.8e-10 70.1 66 48.5
Peaxi162Scf00652g00418 Petunia axillaris HOM05D002824 ORTHO05D008771 1.8e-10 70.1 66 48.5
AT4G11175 Arabidopsis thaliana HOM05D002824 ORTHO05D008771 2.3e-10 69.7 114 38.6
CAN.G767.42 Capsicum annuum HOM05D002824 ORTHO05D008771 2.3e-10 69.7 66 48.5
QL08p021656 Quercus lobata HOM05D002824 ORTHO05D008771 2.3e-10 69.7 74 45.9
COL.COLO4_21755 Corchorus olitorius HOM05D002824 ORTHO05D008771 4.0e-10 68.9 97 44.3
Aqoxy7G01548 Aquilegia oxysepala HOM05D002824 ORTHO05D008771 5.2e-10 68.6 92 37.0
Cpa.g.sc321.5 Carica papaya HOM05D002824 ORTHO05D008771 5.2e-10 68.6 74 45.9
CsaV3_4G033730 Cucumis sativus L. HOM05D002824 ORTHO05D008771 5.2e-10 68.6 114 35.1
Lsat_1_v5_gn_2_136980 Lactuca sativa HOM05D002824 ORTHO05D008771 5.2e-10 68.6 60 53.3
Prupe.4G182300 Prunus persica HOM05D002824 ORTHO05D008771 5.2e-10 68.6 62 46.8
Solyc12g098350.1 Solanum lycopersicum HOM05D002824 ORTHO05D008771 5.2e-10 68.6 66 47.0
Sopen12g033130 Solanum pennellii HOM05D002824 ORTHO05D008771 5.2e-10 68.6 66 47.0
PGSC0003DMG400007705 Solanum tuberosum HOM05D002824 ORTHO05D008771 5.2e-10 68.6 66 47.0
Lj3g0012155 Lotus japonicus HOM05D002824 ORTHO05D008771 6.8e-10 68.2 95 38.9
Potri.018G038900 Populus trichocarpa HOM05D002824 ORTHO05D008771 8.8e-10 67.8 69 46.4
arahy.Tifrunner.gnm1.ann1.RFE8PP Arachis hypogaea HOM05D002824 ORTHO05D008771 1.5e-09 67.0 76 44.7
MELO3C016702.2 Cucumis melo HOM05D002824 ORTHO05D008771 1.5e-09 67.0 117 37.6
ClCG11G018100 Citrullus lanatus HOM05D002824 ORTHO05D008771 2.0e-09 66.6 129 33.3
Ciclev10022760m.g Citrus clementina HOM05D002824 ORTHO05D008771 2.0e-09 66.6 68 50.0
FAN11G2965 Fragaria x ananassa HOM05D002824 ORTHO05D008771 2.0e-09 66.6 66 45.5
FAN21G0827 Fragaria x ananassa HOM05D002824 ORTHO05D008771 2.0e-09 66.6 66 45.5
Medtr0002s0770 Medicago truncatula HOM05D002824 ORTHO05D008771 2.0e-09 66.6 64 46.9
Medtr8g061130 Medicago truncatula HOM05D002824 ORTHO05D008771 2.0e-09 66.6 90 40.0
Atru.chr1.2540 Acer truncatum HOM05D002824 ORTHO05D008771 2.6e-09 66.2 60 53.3
Eucgr.G00343 Eucalyptus grandis HOM05D002824 ORTHO05D008771 2.6e-09 66.2 60 50.0
Manes.10G116800 Manihot esculenta HOM05D002824 ORTHO05D008771 2.6e-09 66.2 68 45.6
Atru.chr9.2077 Acer truncatum HOM05D002824 ORTHO05D008771 3.4e-09 65.9 60 51.7
Lalb_Chr01g0006541 Lupinus albus HOM05D002824 ORTHO05D008771 3.4e-09 65.9 76 42.1
TPR.G40092 Trifolium pratense HOM05D002824 ORTHO05D008771 3.4e-09 65.9 92 38.0
Hund29957 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.4e-09 65.5 74 40.5
Glyma.17G080200 Glycine max HOM05D002824 ORTHO05D008771 5.7e-09 65.1 87 36.8
Manes.07G025200 Manihot esculenta HOM05D002824 ORTHO05D008771 5.7e-09 65.1 60 48.3
Phvul.003G183400 Phaseolus vulgaris HOM05D002824 ORTHO05D008771 5.7e-09 65.1 74 43.2
Hund27578 Selenicereus undatus HOM05D002824 ORTHO05D007162 5.7e-09 65.1 67 41.8
VMungo1215G1991 Vigna mungo HOM05D002824 ORTHO05D008771 5.7e-09 65.1 74 43.2
Potri.006G241100 Populus trichocarpa HOM05D002824 ORTHO05D008771 7.5e-09 64.7 69 44.9
Sed0016999 Sechium edule HOM05D002824 ORTHO05D008771 7.5e-09 64.7 121 33.1
Sabra06G0188500 Salix brachista HOM05D002824 ORTHO05D008771 9.8e-09 64.3 69 44.9
Hund04057 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund08802 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund12527 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund19320 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund27962 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund27985 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund28109 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund28268 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund28459 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund28519 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund28529 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund28632 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund28678 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund28746 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund28759 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund28778 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund28846 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund29022 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund29036 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund29217 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund29505 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund29525 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund29537 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund29554 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund29593 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund29605 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund29612 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund29682 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund30031 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund30069 Selenicereus undatus HOM05D002824 ORTHO05D008771 9.8e-09 64.3 74 39.2
Hund30272 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund30490 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund30495 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
Hund30544 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.8e-09 64.3 74 39.2
CiPaw.11G169000 Carya illinoinensis HOM05D002824 ORTHO05D008771 1.7e-08 63.5 138 31.9
HanXRQChr00c0394g0574551 Helianthus annuus HOM05D002824 ORTHO05D008771 1.7e-08 63.5 68 44.1
HanXRQChr00c0593g0576361 Helianthus annuus HOM05D002824 ORTHO05D008771 1.7e-08 63.5 68 44.1
HanXRQChr00c0925g0577891 Helianthus annuus HOM05D002824 ORTHO05D008771 1.7e-08 63.5 68 44.1
HanXRQChr01g0020221 Helianthus annuus HOM05D002824 ORTHO05D008771 1.7e-08 63.5 68 44.1
HanXRQChr04g0127491 Helianthus annuus HOM05D002824 ORTHO05D008771 1.7e-08 63.5 68 44.1
HanXRQChr05g0152571 Helianthus annuus HOM05D002824 ORTHO05D008771 1.7e-08 63.5 68 44.1
HanXRQChr10g0284381 Helianthus annuus HOM05D002824 ORTHO05D008771 1.7e-08 63.5 68 44.1
HanXRQChr10g0318061 Helianthus annuus HOM05D002824 ORTHO05D008771 1.7e-08 63.5 68 44.1
HanXRQChr11g0321091 Helianthus annuus HOM05D002824 ORTHO05D008771 1.7e-08 63.5 68 44.1
HanXRQChr11g0326961 Helianthus annuus HOM05D002824 ORTHO05D008771 1.7e-08 63.5 68 44.1
HanXRQChr12g0369851 Helianthus annuus HOM05D002824 ORTHO05D008771 1.7e-08 63.5 68 44.1
HanXRQChr15g0486561 Helianthus annuus HOM05D002824 ORTHO05D008771 1.7e-08 63.5 68 44.1
HanXRQCPg0580181 Helianthus annuus HOM05D002824 ORTHO05D008771 1.7e-08 63.5 68 44.1
Psat4g172920 Pisum sativum HOM05D002824 ORTHO05D008771 1.7e-08 63.5 84 40.5
DCAR_032520 Daucus carota HOM05D002824 ORTHO05D008771 2.2e-08 63.2 68 42.6
Glyma.05G019600 Glycine max HOM05D002824 ORTHO05D008771 2.2e-08 63.2 112 33.0
PSO548G0003 Papaver somniferum HOM05D002824 ORTHO05D008771 2.8e-08 62.8 68 44.1
PGR042G2139 Punica granatum HOM05D002824 ORTHO05D008771 2.8e-08 62.8 126 37.3
Hma1.2p1_0818F.1_g223320 Hydrangea macrophylla HOM05D002824 ORTHO05D008771 6.3e-08 61.6 60 45.0
Sc25g0002050 Simmondsia chinensis HOM05D000964 ORTHO05D001488 6.3e-08 61.6 68 44.1
Ah.10g027210 Amaranthus hybridus HOM05D000964 ORTHO05D001488 8.3e-08 61.2 68 42.6
Ah.10g027340 Amaranthus hybridus HOM05D000964 ORTHO05D001488 8.3e-08 61.2 68 42.6
Ah.10g027460 Amaranthus hybridus HOM05D000964 ORTHO05D001488 8.3e-08 61.2 68 42.6
EL10Ac5g11668 Beta vulgaris HOM05D002824 ORTHO05D008771 8.3e-08 61.2 68 42.6
Hund26844 Selenicereus undatus HOM05D000964 ORTHO05D001488 1.8e-07 60.1 62 40.3
Ah.10g028980 Amaranthus hybridus HOM05D000964 ORTHO05D001488 3.1e-07 59.3 68 42.6
PSO782G5188 Papaver somniferum HOM05D002824 ORTHO05D008771 9.2e-07 57.8 72 44.4
Cc09_g05310 Coffea canephora HOM05D002824 ORTHO05D008771 1.2e-06 57.4 65 46.2
Ca_24278_v3 Cicer arietinum L. HOM05D002824 ORTHO05D008771 1.6e-06 57.0 56 46.4
Hund29164 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.6e-06 57.0 68 36.8
Sc16g0004450 Simmondsia chinensis HOM05D002824 ORTHO05D008771 2.0e-06 56.6 68 42.6


User provided reference genes

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