Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre01.g007651 Chlamydomonas reinhardtii HOM05D005810 ORTHO05D007279 0.0e+00 1246.9 1102 100.0
ECA232G3974 Erigeron canadensis HOM05D005810 ORTHO05D007279 4.4e-68 264.2 645 31.9
QL03p024871 Quercus lobata HOM05D005810 ORTHO05D007279 1.1e-66 259.6 649 31.3
FvH4_6g03330 Fragaria vesca HOM05D005810 ORTHO05D007279 3.1e-66 258.1 656 30.8
THA.LOC104821678 Tarenaya hassleriana HOM05D005810 ORTHO05D007279 1.2e-65 256.1 647 31.1
PSO832G3650 Papaver somniferum HOM05D005810 ORTHO05D007279 2.0e-65 255.4 652 30.7
PGR031G1118 Punica granatum HOM05D005810 ORTHO05D007279 2.0e-65 255.4 652 31.4
PSO210G1835 Papaver somniferum HOM05D005810 ORTHO05D007279 5.9e-65 253.8 647 30.8
Cfa006452 Carpinus fangiana HOM05D005810 ORTHO05D007279 5.0e-64 250.8 645 30.9
CARHR079070 Cardamine hirsuta HOM05D005810 ORTHO05D007279 1.1e-63 249.6 646 31.4
Duzib177G1000 Durio zibethinus HOM05D005810 ORTHO05D007279 1.5e-63 249.2 652 29.8
AT3G04820 Arabidopsis thaliana HOM05D005810 ORTHO05D007279 2.5e-63 248.4 646 31.1
MELO3C024669.2 Cucumis melo HOM05D005810 ORTHO05D007279 2.5e-63 248.4 646 31.1
Prupe.6G340900 Prunus persica HOM05D005810 ORTHO05D007279 2.5e-63 248.4 652 30.5
Potri.005G051400 Populus trichocarpa HOM05D005810 ORTHO05D007279 3.2e-63 248.1 652 30.5
Thecc.05G287300 Theobroma cacao HOM05D005810 ORTHO05D007279 3.2e-63 248.1 654 32.0
Carub.0003s0400 Capsella rubella HOM05D005810 ORTHO05D007279 4.2e-63 247.7 645 30.7
Lj1g0027742 Lotus japonicus HOM05D005810 ORTHO05D007279 5.5e-63 247.3 650 30.3
AL3G14980 Arabidopsis lyrata HOM05D005810 ORTHO05D007279 7.2e-63 246.9 645 30.9
Glyma.19G243400 Glycine max HOM05D005810 ORTHO05D007279 7.2e-63 246.9 653 29.9
Sp3g03650 Schrenkiella parvula HOM05D005810 ORTHO05D007279 9.5e-63 246.5 645 30.2
Glyma.03G245900 Glycine max HOM05D005810 ORTHO05D007279 1.2e-62 246.1 653 29.7
Migut.B01074 Erythranthe guttata HOM05D005810 ORTHO05D007279 2.1e-62 245.4 653 29.7
RcHm_v2.0_Chr3g0451831 Rosa chinensis HOM05D005810 ORTHO05D007279 3.6e-62 244.6 658 30.2
Phvul.006G100200 Phaseolus vulgaris HOM05D005810 ORTHO05D007279 4.7e-62 244.2 660 29.8
Eucgr.B01694 Eucalyptus grandis HOM05D005810 ORTHO05D007279 8.0e-62 243.4 645 30.7
MD04G1221700 Malus domestica HOM05D005810 ORTHO05D007279 8.0e-62 243.4 650 30.2
BcaC01g04347 Brassica carinata HOM05D005810 ORTHO05D007279 1.4e-61 242.7 645 30.5
BcaB04g19298 Brassica carinata HOM05D005810 ORTHO05D007279 2.3e-61 241.9 645 30.7
Gohir.A11G254200 Gossypium hirsutum HOM05D005810 ORTHO05D007279 2.3e-61 241.9 654 32.3
CANSAT54G2140 Cannabis sativa HOM05D005810 ORTHO05D007279 4.0e-61 241.1 646 30.5
HanXRQChr12g0379621 Helianthus annuus HOM05D005810 ORTHO05D007279 4.0e-61 241.1 658 31.0
BolC3t16404H Brassica oleracea HOM05D005810 ORTHO05D007279 6.8e-61 240.4 645 30.5
Gorai.007G284000 Gossypium raimondii HOM05D005810 ORTHO05D007279 6.8e-61 240.4 654 33.2
Aqoxy5G00419 Aquilegia oxysepala HOM05D005810 ORTHO05D007279 8.8e-61 240.0 660 30.3
Gohir.D11G264000 Gossypium hirsutum HOM05D005810 ORTHO05D007279 1.5e-60 239.2 654 32.7
BraA03t12559Z Brassica rapa HOM05D005810 ORTHO05D007279 2.0e-60 238.8 657 30.3
SalBow8G0563 Salvia bowleyana HOM05D005810 ORTHO05D007279 7.5e-60 236.9 651 30.6
CDE05G3473 Ceratophyllum demersum HOM05D005810 ORTHO05D007279 9.8e-60 236.5 644 30.0
CSS0027419 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 2.8e-59 235.0 653 29.4
Ca_09411_v3 Cicer arietinum L. HOM05D005810 ORTHO05D007279 2.8e-59 235.0 655 30.4
C03p41160 Brassica napus HOM05D005810 ORTHO05D007279 3.7e-59 234.6 645 30.1
Lalb_Chr18g0045021 Lupinus albus HOM05D005810 ORTHO05D007279 3.7e-59 234.6 649 29.1
Pp3c18_8560 Physcomitrium patens HOM05D005810 ORTHO05D007279 4.9e-59 234.2 656 29.3
Sed0015078 Sechium edule HOM05D005810 ORTHO05D007279 4.9e-59 234.2 654 30.9
COL.COLO4_15299 Corchorus olitorius HOM05D005810 ORTHO05D007279 6.3e-59 233.8 656 29.6
A03p33850 Brassica napus HOM05D005810 ORTHO05D007279 8.3e-59 233.4 657 30.0
arahy.Tifrunner.gnm1.ann1.E80190 Arachis hypogaea HOM05D005810 ORTHO05D007279 1.1e-58 233.0 657 30.4
Psat3g008040 Pisum sativum HOM05D005810 ORTHO05D007279 1.1e-58 233.0 651 30.7
Aa31LG5G15210 Aethionema arabicum HOM05D005810 ORTHO05D007279 1.4e-58 232.6 654 30.1
VMungo0222G0001 Vigna mungo HOM05D005810 ORTHO05D007279 1.4e-58 232.6 659 29.4
Ciclev10003382m.g Citrus clementina HOM05D005810 ORTHO05D007279 2.4e-58 231.9 653 30.0
Thhalv10022286m.g Eutrema salsugineum HOM05D005810 ORTHO05D007279 3.1e-58 231.5 643 30.2
GSVIVG01021833001 Vitis vinifera HOM05D005810 ORTHO05D007279 3.1e-58 231.5 659 29.9
Zm00001eb328420 Zea mays HOM05D005810 ORTHO05D007279 3.1e-58 231.5 646 31.0
arahy.Tifrunner.gnm1.ann1.BBX725 Arachis hypogaea HOM05D005810 ORTHO05D007279 4.1e-58 231.1 657 30.3
ClCG06G009190 Citrullus lanatus HOM05D005810 ORTHO05D007279 4.1e-58 231.1 646 31.7
CSS0013071 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 1.2e-57 229.6 664 28.9
Ah.06g192190 Amaranthus hybridus HOM05D005810 ORTHO05D007279 2.7e-57 228.4 654 29.4
CAN.G134.120 Capsicum annuum HOM05D005810 ORTHO05D007279 2.7e-57 228.4 650 29.7
MCO09G788 Micromonas commoda HOM05D005810 ORTHO05D007279 4.5e-57 227.6 647 29.8
Mapoly0092s0013 Marchantia polymorpha HOM05D005810 ORTHO05D007279 2.3e-56 225.3 635 28.3
EL10Ac4g09107 Beta vulgaris HOM05D005810 ORTHO05D007279 6.6e-56 223.8 637 29.7
PRCOL_00005025 Prasinoderma coloniale HOM05D005810 ORTHO05D007279 4.3e-55 221.1 654 33.0
MD12G1237800 Malus domestica HOM05D005810 ORTHO05D007279 3.6e-54 218.0 560 30.4
Rhsim05G0160900 Rhododendron simsii HOM05D005810 ORTHO05D007279 6.1e-54 217.2 672 28.9
TPR.G6991 Trifolium pratense HOM05D005810 ORTHO05D007279 6.1e-54 217.2 673 28.8
Medtr7g114850 Medicago truncatula HOM05D005810 ORTHO05D007279 6.8e-53 213.8 650 28.9
CiPaw.07G064800 Carya illinoinensis HOM05D005810 ORTHO05D007279 5.7e-52 210.7 486 31.9
Cpa.g.sc117.72 Carica papaya HOM05D005810 ORTHO05D007279 2.2e-51 208.8 651 28.1
Sc09g0003830 Simmondsia chinensis HOM05D005810 ORTHO05D007279 2.9e-51 208.4 362 38.7
Manes.09G154600 Manihot esculenta HOM05D005810 ORTHO05D007279 8.3e-51 206.8 362 36.7
SMO351G0210 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 1.1e-50 206.5 666 28.1
Manes.08G132300 Manihot esculenta HOM05D005810 ORTHO05D007279 3.5e-49 201.4 486 31.1
Atru.chr2.784 Acer truncatum HOM05D005810 ORTHO05D007279 4.6e-49 201.1 363 36.6
Lsat_1_v5_gn_5_37760 Lactuca sativa HOM05D005810 ORTHO05D007279 1.3e-48 199.5 525 29.9
AUR62001034 Chenopodium quinoa HOM05D005810 ORTHO05D007279 5.0e-48 197.6 658 29.0
ATR0665G477 Amborella trichopoda HOM05D005810 ORTHO05D007279 4.7e-46 191.0 645 27.1
Cc02_g31830 Coffea canephora HOM05D005810 ORTHO05D007279 4.7e-46 191.0 368 36.1
Peaxi162Scf00282g00136 Petunia axillaris HOM05D005810 ORTHO05D007279 1.4e-45 189.5 646 27.4
Zm00001eb352870 Zea mays HOM05D005810 ORTHO05D007279 1.8e-45 189.1 242 46.3
DCAR_006618 Daucus carota HOM05D005810 ORTHO05D007279 5.2e-45 187.6 644 27.5
vmacro14215 Vaccinium macrocarpon HOM05D005810 ORTHO05D007279 4.4e-44 184.5 716 26.3
TAR365G0727 Trochodendron aralioides HOM05D005810 ORTHO05D007279 1.3e-43 183.0 629 27.0
Nitab4.5_0005059g0010 Nicotiana tabacum HOM05D005810 ORTHO05D007279 1.1e-42 179.9 659 26.3
CsaV3_1G045590 Cucumis sativus L. HOM05D005810 ORTHO05D007279 5.4e-42 177.6 473 31.5
FAN05G1843 Fragaria x ananassa HOM05D005810 ORTHO05D007279 2.0e-41 175.6 654 27.2
HPP92_028013 Vanilla planifolia HOM05D005810 ORTHO05D007279 1.3e-40 172.9 646 26.2
Eucgr.B02108 Eucalyptus grandis HOM05D005810 ORTHO05D007279 1.7e-40 172.6 594 28.6
AUR62004921 Chenopodium quinoa HOM05D005810 ORTHO05D007279 3.9e-40 171.4 647 27.7
unitig_37.g12634 Utricularia gibba HOM05D005810 ORTHO05D007279 3.9e-40 171.4 645 25.9
CBR_g36821 Chara braunii HOM05D005810 ORTHO05D007279 6.2e-38 164.1 630 26.5
Haze_04339 Corylus avellana HOM05D005810 ORTHO05D007279 8.1e-38 163.7 240 42.1
Hund06958 Selenicereus undatus HOM05D005810 ORTHO05D007279 2.2e-35 155.6 648 26.5
Os05g0509300 Oryza sativa ssp. japonica HOM05D005810 ORTHO05D007279 3.7e-35 154.8 206 43.7
Sopen01g041230 Solanum pennellii HOM05D005810 ORTHO05D007279 4.9e-35 154.5 202 44.6
Solyc01g097600.2 Solanum lycopersicum HOM05D005810 ORTHO05D007279 6.4e-35 154.1 202 44.6
MBI11_g10322_MAGBIO Magnolia biondii HOM05D005810 ORTHO05D007279 1.7e-32 146.0 649 25.1
FAN14G4259 Fragaria x ananassa HOM05D005810 ORTHO05D007279 1.1e-29 136.7 202 41.6
FAN02G1150 Fragaria x ananassa HOM05D005810 ORTHO05D007279 1.8e-29 136.0 202 41.1
FAN05G0700 Fragaria x ananassa HOM05D005810 ORTHO05D007279 4.0e-29 134.8 202 40.6
Lj7C488G4 Lonicera japonica HOM05D005810 ORTHO05D007279 7.6e-28 130.6 642 24.8
Os01g0773000 Oryza sativa ssp. japonica HOM05D005810 ORTHO05D007279 4.1e-26 124.8 167 44.9
Dinv13659 Davidia involucrata HOM05D005810 ORTHO05D007279 1.3e-24 119.8 167 44.3
Nitab4.5_0005729g0080 Nicotiana tabacum HOM05D005810 ORTHO05D007279 1.3e-24 119.8 236 35.2
AagrBONN_evm.TU.Sc2ySwM_362.2883 Anthoceros agrestis HOM05D005810 ORTHO05D007279 4.7e-22 111.3 167 40.7
AagrBONN_evm.TU.Sc2ySwM_362.2882 Anthoceros agrestis HOM05D005810 ORTHO05D007279 8.9e-21 107.1 339 28.3
Zm00001eb281050 Zea mays HOM05D005810 ORTHO05D007279 9.9e-20 103.6 170 40.0
Dinv13660 Davidia involucrata HOM05D005810 ORTHO05D007279 1.9e-18 99.4 339 27.1
SMO364G0521 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 2.4e-18 99.0 375 26.1
Zm00001eb054900 Zea mays HOM05D005810 ORTHO05D007279 3.2e-18 98.6 183 38.3
CsaV3_UNG004080 Cucumis sativus L. HOM05D005810 ORTHO05D007279 3.6e-14 85.1 367 25.3
Oeu060673.3 Olea europaea HOM05D005810 ORTHO05D007279 4.8e-14 84.7 383 24.5
SHI07783 Sapria himalayana HOM05D000023 ORTHO05D000014 5.3e-13 81.3 101 42.6
Haze_04340 Corylus avellana HOM05D005810 ORTHO05D007279 1.3e-11 76.6 199 29.1
HPP92_018612 Vanilla planifolia HOM05D005810 ORTHO05D007279 2.1e-09 69.3 215 26.5
Cc02_g31840 Coffea canephora HOM05D005810 ORTHO05D007279 6.0e-09 67.8 211 27.0
Atru.chr2.785 Acer truncatum HOM05D005810 ORTHO05D007279 8.7e-08 63.9 106 34.0
Nitab4.5_0005729g0070 Nicotiana tabacum HOM05D005810 ORTHO05D007279 2.8e-06 58.9 95 31.6


User provided reference genes

Program Settings