Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc97.37 Carica papaya HOM05D006818 ORTHO05D008674 2.3e-193 678.7 333 100.0
GSVIVG01001999001 Vitis vinifera HOM05D006818 ORTHO05D008674 2.4e-150 535.8 316 82.6
QL08p011921 Quercus lobata HOM05D006818 ORTHO05D008674 1.3e-148 530.0 329 78.7
Dinv22282 Davidia involucrata HOM05D006818 ORTHO05D008674 4.9e-148 528.1 327 78.3
QL08p012092 Quercus lobata HOM05D006818 ORTHO05D008674 3.5e-146 521.9 328 78.4
Thecc.07G044200 Theobroma cacao HOM05D006818 ORTHO05D008674 7.8e-146 520.8 314 79.3
Manes.15G074101 Manihot esculenta HOM05D006818 ORTHO05D008674 1.0e-145 520.4 339 76.7
COL.COLO4_09629 Corchorus olitorius HOM05D006818 ORTHO05D008674 3.3e-144 515.4 336 76.5
Gohir.A01G077200 Gossypium hirsutum HOM05D006818 ORTHO05D008674 2.8e-143 512.3 332 75.3
CSS0009238 Camellia sinensis var. sinensis HOM05D006818 ORTHO05D008674 4.8e-143 511.5 329 76.9
Gohir.D01G064700 Gossypium hirsutum HOM05D006818 ORTHO05D008674 1.1e-142 510.4 332 75.0
Gorai.002G085600 Gossypium raimondii HOM05D006818 ORTHO05D008674 1.1e-142 510.4 332 75.3
Ciclev10008835m.g Citrus clementina HOM05D006818 ORTHO05D008674 1.8e-142 509.6 336 75.6
Duzib213G0630 Durio zibethinus HOM05D006818 ORTHO05D008674 5.3e-142 508.1 333 76.0
CiPaw.11G186900 Carya illinoinensis HOM05D006818 ORTHO05D008674 2.0e-141 506.1 329 75.4
ClCG05G014460 Citrullus lanatus HOM05D006818 ORTHO05D008674 2.6e-141 505.8 331 75.5
TWI39G0401 Tripterygium wilfordii HOM05D006818 ORTHO05D008674 1.1e-139 500.4 339 74.0
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 1.9e-139 499.6 329 74.5
Potri.001G420800 Populus trichocarpa HOM05D006818 ORTHO05D008674 9.3e-139 497.3 337 72.1
Phvul.008G265400 Phaseolus vulgaris HOM05D006818 ORTHO05D008674 6.0e-138 494.6 319 76.2
TAR627G0163 Trochodendron aralioides HOM05D006818 ORTHO05D008674 1.3e-137 493.4 328 73.5
CsaV3_3G023260 Cucumis sativus L. HOM05D006818 ORTHO05D008674 3.0e-137 492.3 330 74.2
Rhsim06G0214800 Rhododendron simsii HOM05D006818 ORTHO05D008674 3.9e-137 491.9 328 73.2
Eucgr.F03445 Eucalyptus grandis HOM05D006818 ORTHO05D008674 8.7e-137 490.7 328 72.0
Lj8A167T47 Lonicera japonica HOM05D006818 ORTHO05D008674 1.1e-136 490.3 325 74.2
RcHm_v2.0_Chr5g0037981 Rosa chinensis HOM05D006818 ORTHO05D008674 2.5e-136 489.2 329 73.6
Ca_06305_v3 Cicer arietinum L. HOM05D006818 ORTHO05D008674 3.3e-136 488.8 329 75.1
Sed0006226 Sechium edule HOM05D006818 ORTHO05D008674 3.3e-136 488.8 336 71.7
MELO3C018077.2 Cucumis melo HOM05D006818 ORTHO05D008674 4.3e-136 488.4 328 74.1
VMungo0647G1753 Vigna mungo HOM05D006818 ORTHO05D008674 9.6e-136 487.3 329 74.2
Glyma.14G025600 Glycine max HOM05D006818 ORTHO05D008674 1.6e-135 486.5 331 73.1
Nitab4.5_0000653g0090 Nicotiana tabacum HOM05D006818 ORTHO05D008674 1.1e-134 483.8 327 71.9
Oeu005459.1 Olea europaea HOM05D006818 ORTHO05D008674 1.4e-134 483.4 327 74.0
LjContig00308g0005180 Lotus japonicus HOM05D006818 ORTHO05D008674 1.8e-134 483.0 327 74.3
Peaxi162Scf01097g00023 Petunia axillaris HOM05D006818 ORTHO05D008674 1.8e-134 483.0 326 72.4
MD11G1222300 Malus domestica HOM05D006818 ORTHO05D008674 2.4e-134 482.6 328 71.6
CANSAT25G1970 Cannabis sativa HOM05D006818 ORTHO05D008674 3.1e-134 482.3 307 76.5
Glyma.02G289400 Glycine max HOM05D006818 ORTHO05D008674 3.1e-134 482.3 330 73.0
Sabra16G0285700 Salix brachista HOM05D006818 ORTHO05D008674 6.9e-134 481.1 355 68.2
FvH4_3g22121 Fragaria vesca HOM05D006818 ORTHO05D008674 9.0e-134 480.7 331 71.9
Nitab4.5_0000749g0100 Nicotiana tabacum HOM05D006818 ORTHO05D008674 1.2e-133 480.3 312 74.4
Atru.chr2.3275 Acer truncatum HOM05D006818 ORTHO05D008674 2.6e-133 479.2 322 74.2
Cc05_g13490 Coffea canephora HOM05D006818 ORTHO05D008674 2.6e-133 479.2 330 70.0
CAN.G315.6 Capsicum annuum HOM05D006818 ORTHO05D008674 3.4e-133 478.8 326 71.8
Sopen12g001170 Solanum pennellii HOM05D006818 ORTHO05D008674 3.4e-133 478.8 327 70.6
Lalb_Chr04g0248591 Lupinus albus HOM05D006818 ORTHO05D008674 4.5e-133 478.4 324 72.5
PGR031G1507 Punica granatum HOM05D006818 ORTHO05D008674 5.8e-133 478.0 338 70.4
Prupe.4G208600 Prunus persica HOM05D006818 ORTHO05D008674 1.7e-132 476.5 323 72.1
Solyc12g005180.2 Solanum lycopersicum HOM05D006818 ORTHO05D008674 3.8e-132 475.3 327 70.0
Nn1g07100 Nelumbo nucifera HOM05D006818 ORTHO05D008674 1.1e-131 473.8 334 71.3
MSTRG.6906 Avicennia marina HOM05D006818 ORTHO05D008674 1.9e-131 473.0 327 72.2
Ah.06g195870 Amaranthus hybridus HOM05D006818 ORTHO05D008674 3.2e-131 472.2 326 69.6
Medtr5g092080 Medicago truncatula HOM05D006818 ORTHO05D008674 1.0e-129 467.2 334 71.0
Sc06g0005170 Simmondsia chinensis HOM05D006818 ORTHO05D008674 1.3e-129 466.8 323 70.9
MBI18_g06645_MAGBIO Magnolia biondii HOM05D006818 ORTHO05D008674 6.7e-129 464.5 331 70.7
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 2.5e-128 462.6 297 74.1
Aqoxy1G03627 Aquilegia oxysepala HOM05D006818 ORTHO05D008674 1.6e-127 459.9 322 70.8
EL10Ac4g09438 Beta vulgaris HOM05D006818 ORTHO05D008674 6.2e-127 458.0 342 66.4
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 4.0e-126 455.3 271 79.3
SpUn0103_0020 Schrenkiella parvula HOM05D006818 ORTHO05D008674 2.6e-125 452.6 323 71.2
Psat2g015280 Pisum sativum HOM05D006818 ORTHO05D008674 3.4e-125 452.2 334 69.5
Carub.0005s1401 Capsella rubella HOM05D006818 ORTHO05D008674 5.8e-125 451.4 306 72.9
PGSC0003DMG400001099 Solanum tuberosum HOM05D006818 ORTHO05D008674 7.6e-125 451.1 258 82.2
QL08p012107 Quercus lobata HOM05D006818 ORTHO05D008674 1.0e-124 450.7 247 86.2
ATR0752G046 Amborella trichopoda HOM05D006818 ORTHO05D008674 2.2e-124 449.5 272 78.7
Lsat_1_v5_gn_7_109080 Lactuca sativa HOM05D006818 ORTHO05D008674 6.5e-124 448.0 321 70.1
A06p27360 Brassica napus HOM05D006818 ORTHO05D008674 1.2e-122 443.7 297 74.1
BraA06t25672Z Brassica rapa HOM05D006818 ORTHO05D008674 1.2e-122 443.7 297 74.1
Hund07318 Selenicereus undatus HOM05D006818 ORTHO05D008674 2.1e-122 443.0 338 64.8
DCAR_022551 Daucus carota HOM05D006818 ORTHO05D008674 3.5e-122 442.2 329 67.2
AL5G27200 Arabidopsis lyrata HOM05D006818 ORTHO05D008674 4.6e-122 441.8 323 68.1
BcaB02g10686 Brassica carinata HOM05D006818 ORTHO05D008674 7.9e-122 441.0 323 69.3
Thhalv10010497m.g Eutrema salsugineum HOM05D006818 ORTHO05D008674 1.3e-121 440.3 321 68.8
arahy.Tifrunner.gnm1.ann1.37S2BM Arachis hypogaea HOM05D006818 ORTHO05D008674 3.0e-121 439.1 333 68.8
BcaC01g02294 Brassica carinata HOM05D006818 ORTHO05D008674 5.1e-121 438.3 297 73.1
C03p66930 Brassica napus HOM05D006818 ORTHO05D008674 5.1e-121 438.3 297 73.1
Atru.BG.12.p Acer truncatum HOM05D006818 ORTHO05D008674 6.7e-121 438.0 232 88.8
BolC3t18966H Brassica oleracea HOM05D006818 ORTHO05D008674 6.7e-121 438.0 297 73.1
SGA_v2.0_scaffold80G25946 Striga asiatica HOM05D006818 ORTHO05D008674 6.7e-121 438.0 326 68.1
arahy.Tifrunner.gnm1.ann1.D1ZW30 Arachis hypogaea HOM05D006818 ORTHO05D008674 8.7e-121 437.6 333 68.5
HanXRQChr15g0494291 Helianthus annuus HOM05D006818 ORTHO05D008674 1.1e-120 437.2 327 68.8
PSO210G7832 Papaver somniferum HOM05D006818 ORTHO05D008674 1.5e-120 436.8 333 68.8
Migut.M01786 Erythranthe guttata HOM05D006818 ORTHO05D008674 4.3e-120 435.3 302 71.9
AT3G47860 Arabidopsis thaliana HOM05D006818 ORTHO05D008674 5.7e-120 434.9 307 72.0
ECA236G4406 Erigeron canadensis HOM05D006818 ORTHO05D008674 1.3e-119 433.7 326 68.1
CDE01G0156 Ceratophyllum demersum HOM05D006818 ORTHO05D008674 3.7e-119 432.2 330 65.2
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 1.8e-118 429.9 258 77.9
Actinidia05109 Actinidia chinensis HOM05D006818 ORTHO05D008674 3.4e-117 425.6 326 66.3
PSO832G0412 Papaver somniferum HOM05D006818 ORTHO05D008674 3.4e-117 425.6 330 66.7
Aa31LG4G16540 Aethionema arabicum HOM05D006818 ORTHO05D008674 5.9e-117 424.9 317 66.6
Os04g0626400 Oryza sativa ssp. japonica HOM05D006818 ORTHO05D008674 1.4e-115 420.2 283 72.4
Zm00001eb070100 Zea mays HOM05D006818 ORTHO05D008674 5.5e-115 418.3 284 70.4
vmacro11742 Vaccinium macrocarpon HOM05D006818 ORTHO05D008674 1.6e-114 416.8 328 66.2
unitig_62.g23277 Utricularia gibba HOM05D006818 ORTHO05D008674 1.4e-113 413.7 334 63.2
HPP92_009349 Vanilla planifolia HOM05D006818 ORTHO05D008674 7.4e-112 407.9 241 79.3
AUR62006731 Chenopodium quinoa HOM05D006818 ORTHO05D008674 1.7e-108 396.7 217 85.3
Sp5g14080 Schrenkiella parvula HOM05D006818 ORTHO05D008674 1.9e-107 393.3 281 71.5
MD03G1208100 Malus domestica HOM05D006818 ORTHO05D008674 1.6e-106 390.2 309 62.8
AUR62000376 Chenopodium quinoa HOM05D006818 ORTHO05D008674 2.8e-95 352.8 313 58.5
SMO147G0254 Selaginella moellendorffii HOM05D006818 ORTHO05D008674 5.0e-92 342.0 233 67.8
Hma1.2p1_1271F.1_g271840 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 1.9e-91 340.1 183 87.4
Hma1.2p1_1609F.1_g293429 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 1.9e-91 340.1 183 87.4
Mapoly0115s0028 Marchantia polymorpha HOM05D006818 ORTHO05D008674 1.9e-91 340.1 288 59.0
TPR.G12727 Trifolium pratense HOM05D006818 ORTHO05D008674 7.5e-80 301.6 237 65.0
TPR.G29121 Trifolium pratense HOM05D006818 ORTHO05D008674 1.7e-79 300.4 197 76.6
Pp3c9_6110 Physcomitrium patens HOM05D006818 ORTHO05D008674 9.1e-78 294.7 250 55.2
SEGI_29406 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 8.3e-71 271.6 217 63.1
AagrBONN_evm.TU.Sc2ySwM_228.3024 Anthoceros agrestis HOM05D006818 ORTHO05D008674 5.0e-68 262.3 189 65.1
TPR.G29124 Trifolium pratense HOM05D006818 ORTHO05D008674 6.1e-66 255.4 150 84.0
CBR_g57971 Chara braunii HOM05D006818 ORTHO05D008674 5.4e-62 242.3 201 61.2
PRCOL_00005879 Prasinoderma coloniale HOM05D006818 ORTHO05D008674 3.4e-40 169.9 167 49.7
RcHm_v2.0_Chr3g0496801 Rosa chinensis HOM05D006818 ORTHO05D008674 7.8e-37 158.7 139 59.0
Glyma.14G153300 Glycine max HOM05D006818 ORTHO05D008674 3.4e-32 143.3 78 82.1
Ah.06g195920 Amaranthus hybridus HOM05D001023 ORTHO05D000912 3.4e-24 116.7 131 45.0
Actinidia09914 Actinidia chinensis HOM05D006818 ORTHO05D008674 4.6e-21 106.3 59 84.7
SEGI_26249 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 4.3e-11 73.2 52 65.4
Sed0001393 Sechium edule HOM05D006818 ORTHO05D372820 3.4e-08 63.5 252 30.2
Eucgr.C04044 Eucalyptus grandis HOM05D003204 ORTHO05D003566 1.3e-07 61.6 171 29.2
Eucgr.L00627 Eucalyptus grandis HOM05D003204 ORTHO05D003566 1.3e-07 61.6 171 29.2
MD02G1010500 Malus domestica HOM05D003204 ORTHO05D003566 1.7e-07 61.2 170 28.2
Lalb_Chr07g0179701 Lupinus albus HOM05D003204 ORTHO05D003566 1.4e-06 58.2 170 28.2
BcaB08g36152 Brassica carinata HOM05D003204 ORTHO05D003566 1.9e-06 57.8 170 28.8
C02p13650 Brassica napus HOM05D003204 ORTHO05D003566 1.9e-06 57.8 176 29.5
CAN.G551.27 Capsicum annuum HOM05D003204 ORTHO05D003566 1.9e-06 57.8 171 28.7
FvH4_1g01260 Fragaria vesca HOM05D003204 ORTHO05D003566 1.9e-06 57.8 170 28.8
Sp6g19740 Schrenkiella parvula HOM05D003204 ORTHO05D003566 1.9e-06 57.8 167 30.5
BcaC03g14125 Brassica carinata HOM05D003204 ORTHO05D003566 2.5e-06 57.4 170 29.4
BolC2t07477H Brassica oleracea HOM05D003204 ORTHO05D003566 2.5e-06 57.4 170 29.4
MD15G1155500 Malus domestica HOM05D003204 ORTHO05D003566 3.2e-06 57.0 171 30.4
Manes.06G038651 Manihot esculenta HOM05D003204 ORTHO05D003566 3.2e-06 57.0 171 28.7
THA.LOC104811838 Tarenaya hassleriana HOM05D003204 ORTHO05D003566 4.2e-06 56.6 170 28.2
FAN26G1065 Fragaria x ananassa HOM05D003204 ORTHO05D003566 7.2e-06 55.8 167 29.3


User provided reference genes

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