Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc937.2 Carica papaya HOM05D002784 ORTHO05D003113 5.9e-29 130.2 66 100.0
Manes.10G072400 Manihot esculenta HOM05D002784 ORTHO05D003113 8.5e-28 126.3 66 95.5
Thecc.10G126200 Theobroma cacao HOM05D002784 ORTHO05D003113 2.5e-27 124.8 66 95.5
QL04p049939 Quercus lobata HOM05D002784 ORTHO05D003113 3.2e-27 124.4 66 92.4
MD02G1262200 Malus domestica HOM05D002784 ORTHO05D003113 4.2e-27 124.0 66 92.4
Prupe.2G064200 Prunus persica HOM05D002784 ORTHO05D003113 4.2e-27 124.0 66 92.4
TAR623G0153 Trochodendron aralioides HOM05D003667 ORTHO05D004397 4.2e-27 124.0 66 93.9
arahy.Tifrunner.gnm1.ann1.0A1ABD Arachis hypogaea HOM05D002784 ORTHO05D003113 5.5e-27 123.6 66 93.9
Potri.008G014200 Populus trichocarpa HOM05D002784 ORTHO05D003113 5.5e-27 123.6 66 93.9
CANSAT56G2713 Cannabis sativa HOM05D002784 ORTHO05D003113 7.2e-27 123.2 66 95.5
COL.COLO4_06473 Corchorus olitorius HOM05D002784 ORTHO05D003113 7.2e-27 123.2 66 93.9
FAN06G0484 Fragaria x ananassa HOM05D002784 ORTHO05D003113 7.2e-27 123.2 66 92.4
FAN10G2198 Fragaria x ananassa HOM05D002784 ORTHO05D003113 7.2e-27 123.2 66 92.4
Glyma.15G215900 Glycine max HOM05D002784 ORTHO05D003113 7.2e-27 123.2 66 92.4
GSVIVG01010106001 Vitis vinifera HOM05D002784 ORTHO05D003113 7.2e-27 123.2 66 93.9
Duzib114G0326 Durio zibethinus HOM05D002784 ORTHO05D003113 9.4e-27 122.9 66 93.9
PSO063G3478 Papaver somniferum HOM05D002784 ORTHO05D003113 9.4e-27 122.9 66 92.4
PSO339G5144 Papaver somniferum HOM05D002784 ORTHO05D003113 9.4e-27 122.9 66 92.4
RcHm_v2.0_Chr1g0331471 Rosa chinensis HOM05D002784 ORTHO05D003113 1.2e-26 122.5 66 92.4
Aqoxy1G00530 Aquilegia oxysepala HOM05D002784 ORTHO05D003113 1.6e-26 122.1 66 90.9
Medtr8g044240 Medicago truncatula HOM05D002784 ORTHO05D003113 1.6e-26 122.1 66 93.9
Atru.chr12.1171 Acer truncatum HOM05D002784 ORTHO05D003113 2.1e-26 121.7 66 92.4
Gohir.A10G194300 Gossypium hirsutum HOM05D002784 ORTHO05D003113 2.1e-26 121.7 66 92.4
Gohir.D10G201400 Gossypium hirsutum HOM05D002784 ORTHO05D003113 2.1e-26 121.7 66 92.4
Sabra08G0008900 Salix brachista HOM05D000940 ORTHO05D000782 2.1e-26 121.7 66 92.4
CSS0015127 Camellia sinensis var. sinensis HOM05D002784 ORTHO05D003113 2.7e-26 121.3 66 92.4
Phvul.011G185400 Phaseolus vulgaris HOM05D002784 ORTHO05D003113 2.7e-26 121.3 66 92.4
TWI38G1957 Tripterygium wilfordii HOM05D002784 ORTHO05D003113 2.7e-26 121.3 66 92.4
VMungo1127G0070 Vigna mungo HOM05D002784 ORTHO05D003113 2.7e-26 121.3 66 92.4
Lj3g0000082 Lotus japonicus HOM05D002784 ORTHO05D003113 3.6e-26 120.9 66 90.9
AL6G14590 Arabidopsis lyrata HOM05D002784 ORTHO05D003113 4.7e-26 120.6 66 89.4
AT5G04900 Arabidopsis thaliana HOM05D002784 ORTHO05D003113 4.7e-26 120.6 66 89.4
BcaB01g05922 Brassica carinata HOM05D002784 ORTHO05D003113 4.7e-26 120.6 66 89.4
A03p01920 Brassica napus HOM05D002784 ORTHO05D003113 4.7e-26 120.6 66 89.4
C03p02290 Brassica napus HOM05D002784 ORTHO05D003113 4.7e-26 120.6 66 89.4
BolC3t12780H Brassica oleracea HOM05D002784 ORTHO05D003113 4.7e-26 120.6 66 89.4
BraA03t09562Z Brassica rapa HOM05D002784 ORTHO05D003113 4.7e-26 120.6 66 89.4
Thhalv10013856m.g Eutrema salsugineum HOM05D002784 ORTHO05D003113 4.7e-26 120.6 66 89.4
Psat7g067120 Pisum sativum HOM05D002784 ORTHO05D003113 4.7e-26 120.6 66 92.4
Sp6g37910 Schrenkiella parvula HOM05D002784 ORTHO05D003113 4.7e-26 120.6 66 89.4
TPR.G14604 Trifolium pratense HOM05D002784 ORTHO05D003113 4.7e-26 120.6 66 92.4
FAN01G0373 Fragaria x ananassa HOM05D002784 ORTHO05D003113 6.1e-26 120.2 66 90.9
Nn2g14524 Nelumbo nucifera HOM05D002784 ORTHO05D003113 6.1e-26 120.2 66 90.9
Nitab4.5_0000087g0160 Nicotiana tabacum HOM05D002784 ORTHO05D003113 6.1e-26 120.2 66 90.9
Peaxi162Scf00071g00837 Petunia axillaris HOM05D002784 ORTHO05D003113 6.1e-26 120.2 66 90.9
CSS0031926 Camellia sinensis var. sinensis HOM05D002784 ORTHO05D003113 8.0e-26 119.8 66 90.9
CiPaw.13G046600 Carya illinoinensis HOM05D002784 ORTHO05D003113 8.0e-26 119.8 66 90.9
CARHR208360 Cardamine hirsuta HOM05D002784 ORTHO05D003113 1.0e-25 119.4 66 87.9
Ca_24135_v3 Cicer arietinum L. HOM05D002784 ORTHO05D003113 1.0e-25 119.4 66 90.9
Hma1.2p1_1081F.1_g255080 Hydrangea macrophylla HOM05D002784 ORTHO05D003113 1.0e-25 119.4 64 93.8
Hma1.2p1_1081F.1_g255090 Hydrangea macrophylla HOM05D002784 ORTHO05D003113 1.0e-25 119.4 64 93.8
AUR62014298 Chenopodium quinoa HOM05D002784 ORTHO05D003113 1.4e-25 119.0 66 90.9
AUR62042102 Chenopodium quinoa HOM05D002784 ORTHO05D003113 1.4e-25 119.0 66 90.9
SGA_v2.0_scaffold196G40984 Striga asiatica HOM05D002784 ORTHO05D003113 1.4e-25 119.0 66 89.4
vmacro08592 Vaccinium macrocarpon HOM05D002784 ORTHO05D003113 1.8e-25 118.6 66 90.9
ClCG08G008480 Citrullus lanatus HOM05D002784 ORTHO05D003113 2.3e-25 118.2 66 89.4
MBI11_g23648_MAGBIO Magnolia biondii HOM05D002784 ORTHO05D003113 2.3e-25 118.2 66 90.9
Actinidia12133 Actinidia chinensis HOM05D002784 ORTHO05D003113 3.0e-25 117.9 66 89.4
CsaV3_6G004470 Cucumis sativus L. HOM05D002784 ORTHO05D003113 3.0e-25 117.9 66 89.4
Lalb_Chr03g0032311 Lupinus albus HOM05D002784 ORTHO05D003113 3.0e-25 117.9 66 90.9
Sc20g0001060 Simmondsia chinensis HOM05D002784 ORTHO05D003113 3.0e-25 117.9 66 90.9
Rhsim04G0167800 Rhododendron simsii HOM05D002784 ORTHO05D003113 4.0e-25 117.5 66 90.9
Solyc05g032660.4 Solanum lycopersicum HOM05D002784 ORTHO05D003113 5.2e-25 117.1 66 89.4
Sopen05g023370 Solanum pennellii HOM05D002784 ORTHO05D003113 5.2e-25 117.1 66 89.4
Aa31LG11G5800 Aethionema arabicum HOM05D002784 ORTHO05D003113 6.8e-25 116.7 66 87.9
Carub.0006s0384 Capsella rubella HOM05D002784 ORTHO05D003113 6.8e-25 116.7 66 87.9
Migut.N01882 Erythranthe guttata HOM05D002784 ORTHO05D003113 8.8e-25 116.3 66 89.4
Os03g0654600 Oryza sativa ssp. japonica HOM05D002784 ORTHO05D003113 8.8e-25 116.3 66 86.4
Gorai.011G226100 Gossypium raimondii HOM05D002784 ORTHO05D003113 1.2e-24 115.9 70 87.1
Sed0008596 Sechium edule HOM05D002784 ORTHO05D003113 1.2e-24 115.9 66 87.9
EL10Ac4g08762 Beta vulgaris HOM05D002784 ORTHO05D003113 1.5e-24 115.5 66 86.4
Migut.O00433 Erythranthe guttata HOM05D002784 ORTHO05D003113 2.0e-24 115.2 66 87.9
THA.LOC104816482 Tarenaya hassleriana HOM05D002784 ORTHO05D003113 2.0e-24 115.2 66 86.4
DCAR_006630 Daucus carota HOM05D002784 ORTHO05D003113 3.4e-24 114.4 66 84.8
Eucgr.G02650 Eucalyptus grandis HOM05D002784 ORTHO05D003113 3.4e-24 114.4 66 83.3
Cc02_g32140 Coffea canephora HOM05D002784 ORTHO05D003113 4.4e-24 114.0 66 86.4
ECA234G1268 Erigeron canadensis HOM05D000017 ORTHO05D003113 7.5e-24 113.2 66 84.8
HanXRQChr16g0526711 Helianthus annuus HOM05D002784 ORTHO05D003113 7.5e-24 113.2 66 84.8
PGR142G1148 Punica granatum HOM05D002784 ORTHO05D003113 1.7e-23 112.1 66 83.3
Ciclev10016279m.g Citrus clementina HOM05D002784 ORTHO05D003113 2.2e-23 111.7 66 86.4
Lsat_1_v5_gn_4_26300 Lactuca sativa HOM05D002784 ORTHO05D003113 2.2e-23 111.7 66 83.3
SalBow4G0540 Salvia bowleyana HOM05D002784 ORTHO05D003113 8.3e-23 109.8 69 84.1
Hund22255 Selenicereus undatus HOM05D002784 ORTHO05D003113 8.3e-23 109.8 66 81.8
Zm00001eb218390 Zea mays HOM05D002784 ORTHO05D003113 8.3e-23 109.8 66 80.3
HPP92_001902 Vanilla planifolia HOM05D002784 ORTHO05D003113 2.4e-22 108.2 66 81.8
unitig_21.g20046 Utricularia gibba HOM05D002784 ORTHO05D003113 4.1e-22 107.5 66 81.8
ATR0733G079 Amborella trichopoda HOM05D002784 ORTHO05D003113 7.0e-22 106.7 66 80.3
CDE10G1105 Ceratophyllum demersum HOM05D005410 ORTHO05D007394 2.7e-21 104.8 66 80.3
AagrBONN_evm.TU.Sc2ySwM_228.4370 Anthoceros agrestis HOM05D002784 ORTHO05D003113 2.2e-15 85.1 66 63.6
Mapoly0054s0037 Marchantia polymorpha HOM05D002784 ORTHO05D003113 2.2e-15 85.1 66 62.1
Pp3c21_16710 Physcomitrium patens HOM05D002784 ORTHO05D003113 1.8e-14 82.0 66 62.1
Cre14.g608800 Chlamydomonas reinhardtii HOM05D002784 ORTHO05D003113 1.1e-11 72.8 70 54.3
Haze_03413 Corylus avellana HOM05D002784 ORTHO05D003113 1.5e-11 72.4 38 89.5
Carub.0010s0005 Capsella rubella HOM05D002784 ORTHO05D003113 1.9e-11 72.0 66 60.6
CBR_g30763 Chara braunii HOM05D002784 ORTHO05D003113 2.3e-09 65.1 64 50.0
Nitab4.5_0011329g0020 Nicotiana tabacum HOM05D002784 ORTHO05D003113 5.4e-06 53.9 31 83.9
MELO3C019918.2 Cucumis melo HOM05D002784 ORTHO05D003113 7.0e-06 53.5 30 90.0
SEGI_08892 Sequoiadendron giganteum HOM05D002784 ORTHO05D003113 7.0e-06 53.5 35 65.7


User provided reference genes

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