Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc845.5 Carica papaya HOM05D003620 ORTHO05D004261 2.9e-134 481.9 239 100.0
TAR625G1066 Trochodendron aralioides HOM05D003620 ORTHO05D004261 3.8e-78 295.4 170 83.5
RcHm_v2.0_Chr7g0225351 Rosa chinensis HOM05D003620 ORTHO05D004261 1.5e-77 293.5 169 84.0
Thecc.02G144000 Theobroma cacao HOM05D003620 ORTHO05D004261 1.9e-77 293.1 169 83.4
FvH4_5g30530 Fragaria vesca HOM05D003620 ORTHO05D004261 3.3e-77 292.4 169 83.4
FAN18G1779 Fragaria x ananassa HOM05D003620 ORTHO05D004261 3.3e-77 292.4 169 83.4
Nn1g06259 Nelumbo nucifera HOM05D003620 ORTHO05D004261 4.3e-77 292.0 183 78.7
FAN04G1518 Fragaria x ananassa HOM05D003620 ORTHO05D004261 5.6e-77 291.6 169 83.4
FAN08G3618 Fragaria x ananassa HOM05D003620 ORTHO05D004261 5.6e-77 291.6 169 83.4
Cfa005564 Carpinus fangiana HOM05D003620 ORTHO05D004261 9.5e-77 290.8 170 82.4
Prupe.1G560600 Prunus persica HOM05D003620 ORTHO05D004261 1.2e-76 290.4 169 83.4
Ca_00113_v3 Cicer arietinum L. HOM05D003620 ORTHO05D004261 2.1e-76 289.7 167 82.6
Gohir.A12G013800 Gossypium hirsutum HOM05D003620 ORTHO05D004261 3.6e-76 288.9 167 83.2
vmacro01806 Vaccinium macrocarpon HOM05D003620 ORTHO05D004261 6.1e-76 288.1 170 81.2
Manes.07G024800 Manihot esculenta HOM05D003620 ORTHO05D004261 8.0e-76 287.7 169 81.7
Oeu047368.1 Olea europaea HOM05D003620 ORTHO05D004261 1.0e-75 287.3 170 80.0
Gorai.008G014600 Gossypium raimondii HOM05D003620 ORTHO05D004261 1.4e-75 287.0 171 80.7
MD08G1222700 Malus domestica HOM05D003620 ORTHO05D004261 2.3e-75 286.2 180 76.7
MSTRG.16561 Avicennia marina HOM05D003620 ORTHO05D004261 3.0e-75 285.8 167 79.6
Gohir.D12G014500 Gossypium hirsutum HOM05D003620 ORTHO05D004261 4.0e-75 285.4 171 80.1
Lalb_Chr18g0060681 Lupinus albus HOM05D003620 ORTHO05D004261 4.0e-75 285.4 167 82.0
CSS0027167 Camellia sinensis var. sinensis HOM05D003620 ORTHO05D004261 5.2e-75 285.0 167 82.0
Potri.001G172400 Populus trichocarpa HOM05D003620 ORTHO05D004261 5.2e-75 285.0 169 82.2
TPR.G19731 Trifolium pratense HOM05D003620 ORTHO05D004261 5.2e-75 285.0 167 80.8
VMungo0540G0770 Vigna mungo HOM05D003620 ORTHO05D004261 5.2e-75 285.0 167 80.8
ATR1136G049 Amborella trichopoda HOM05D003620 ORTHO05D004261 6.8e-75 284.6 177 77.4
CSS0011415 Camellia sinensis var. sinensis HOM05D003620 ORTHO05D004261 6.8e-75 284.6 170 78.2
QL02p098754 Quercus lobata HOM05D003620 ORTHO05D004261 6.8e-75 284.6 167 82.6
CAN.G523.97 Capsicum annuum HOM05D003620 ORTHO05D004261 1.2e-74 283.9 168 79.2
Lj6g0005534 Lotus japonicus HOM05D003620 ORTHO05D004261 1.2e-74 283.9 167 81.4
Phvul.006G208800 Phaseolus vulgaris HOM05D003620 ORTHO05D004261 1.2e-74 283.9 167 80.8
Psat1g218440 Pisum sativum HOM05D003620 ORTHO05D004261 1.2e-74 283.9 166 80.7
Sc09g0004430 Simmondsia chinensis HOM05D003620 ORTHO05D004261 1.5e-74 283.5 168 81.0
Atru.chr6.881 Acer truncatum HOM05D003620 ORTHO05D004261 2.0e-74 283.1 167 82.6
Dinv24230 Davidia involucrata HOM05D003620 ORTHO05D004261 2.0e-74 283.1 168 80.4
Glyma.08G181200 Glycine max HOM05D003620 ORTHO05D004261 2.0e-74 283.1 167 80.8
THA.LOC104811774 Tarenaya hassleriana HOM05D003620 ORTHO05D004261 2.0e-74 283.1 166 80.7
Peaxi162Scf00001g00523 Petunia axillaris HOM05D003620 ORTHO05D004261 2.6e-74 282.7 170 79.4
TWI14G0354 Tripterygium wilfordii HOM05D003620 ORTHO05D004261 4.4e-74 282.0 170 77.6
THA.LOC104817775 Tarenaya hassleriana HOM05D003620 ORTHO05D004261 5.8e-74 281.6 197 71.6
MBI06_g29671_MAGBIO Magnolia biondii HOM05D003620 ORTHO05D004261 7.5e-74 281.2 181 76.2
Thhalv10012950m.g Eutrema salsugineum HOM05D003620 ORTHO05D004261 9.8e-74 280.8 174 79.3
Potri.003G061700 Populus trichocarpa HOM05D003620 ORTHO05D004261 9.8e-74 280.8 170 80.6
Sp6g18920 Schrenkiella parvula HOM05D003620 ORTHO05D004261 9.8e-74 280.8 172 79.7
SalBow5G2754 Salvia bowleyana HOM05D003620 ORTHO05D004261 1.3e-73 280.4 167 79.6
Migut.B00643 Erythranthe guttata HOM05D003620 ORTHO05D004261 1.7e-73 280.0 168 79.2
HanXRQChr11g0337651 Helianthus annuus HOM05D003620 ORTHO05D004261 1.7e-73 280.0 170 79.4
Nitab4.5_0007987g0020 Nicotiana tabacum HOM05D003620 ORTHO05D004261 2.2e-73 279.6 167 79.6
BcaNung03773 Brassica carinata HOM05D003620 ORTHO05D004261 2.9e-73 279.3 167 80.8
A01p17230 Brassica napus HOM05D003620 ORTHO05D004261 2.9e-73 279.3 167 80.8
BraA01t01679Z Brassica rapa HOM05D003620 ORTHO05D004261 2.9e-73 279.3 167 80.8
Actinidia00242 Actinidia chinensis HOM05D003620 ORTHO05D004261 3.7e-73 278.9 170 79.4
BcaC04g19991 Brassica carinata HOM05D003620 ORTHO05D004261 3.7e-73 278.9 172 79.7
A10p14580 Brassica napus HOM05D003620 ORTHO05D004261 3.7e-73 278.9 172 79.7
C09p49020 Brassica napus HOM05D003620 ORTHO05D004261 3.7e-73 278.9 172 79.7
BolC9t57753H Brassica oleracea HOM05D003620 ORTHO05D004261 3.7e-73 278.9 172 79.7
BraA10t43545Z Brassica rapa HOM05D003620 ORTHO05D004261 3.7e-73 278.9 172 79.7
ECA236G2397 Erigeron canadensis HOM05D003620 ORTHO05D004261 4.9e-73 278.5 170 79.4
Sabra03G0035800 Salix brachista HOM05D003620 ORTHO05D004261 6.4e-73 278.1 168 81.0
SalBow5G2235 Salvia bowleyana HOM05D003620 ORTHO05D004261 6.4e-73 278.1 167 79.0
BcaC09g50725 Brassica carinata HOM05D003620 ORTHO05D004261 8.3e-73 277.7 167 79.6
C01p21590 Brassica napus HOM05D003620 ORTHO05D004261 8.3e-73 277.7 167 79.6
BolC1t02078H Brassica oleracea HOM05D003620 ORTHO05D004261 8.3e-73 277.7 167 79.6
Eucgr.G00656 Eucalyptus grandis HOM05D003620 ORTHO05D004261 8.3e-73 277.7 170 77.6
Sabra01G0139300 Salix brachista HOM05D003620 ORTHO05D004261 8.3e-73 277.7 168 82.1
Actinidia38967 Actinidia chinensis HOM05D003620 ORTHO05D004261 1.1e-72 277.3 170 78.2
Thhalv10024661m.g Eutrema salsugineum HOM05D003620 ORTHO05D004261 1.4e-72 276.9 167 79.6
Os01g0959800 Oryza sativa ssp. japonica HOM05D003620 ORTHO05D004261 1.4e-72 276.9 168 79.8
Aa31LG3G330 Aethionema arabicum HOM05D003620 ORTHO05D004261 1.8e-72 276.6 172 78.5
AT4G25970 Arabidopsis thaliana HOM05D003620 ORTHO05D004261 1.8e-72 276.6 167 80.8
CARHR270980 Cardamine hirsuta HOM05D003620 ORTHO05D004261 1.8e-72 276.6 166 80.7
BcaB08g36077 Brassica carinata HOM05D003620 ORTHO05D004261 2.4e-72 276.2 172 78.5
Cc02_g21940 Coffea canephora HOM05D003620 ORTHO05D004261 2.4e-72 276.2 179 75.4
ECA240G1941 Erigeron canadensis HOM05D003620 ORTHO05D004261 3.2e-72 275.8 170 78.8
Medtr2g008190 Medicago truncatula HOM05D003620 ORTHO05D004261 3.2e-72 275.8 167 78.4
AL8G33150 Arabidopsis lyrata HOM05D003620 ORTHO05D004261 5.4e-72 275.0 175 78.3
AT5G57190 Arabidopsis thaliana HOM05D003620 ORTHO05D004261 5.4e-72 275.0 172 78.5
Carub.0007s1498 Capsella rubella HOM05D003620 ORTHO05D004261 5.4e-72 275.0 167 80.2
MELO3C018674.2 Cucumis melo HOM05D003620 ORTHO05D004261 5.4e-72 275.0 170 77.1
AL7G27030 Arabidopsis lyrata HOM05D003620 ORTHO05D004261 7.0e-72 274.6 167 80.8
CANSAT11G1106 Cannabis sativa HOM05D003620 ORTHO05D004261 7.0e-72 274.6 164 79.9
CDE08G1148 Ceratophyllum demersum HOM05D003620 ORTHO05D004261 7.0e-72 274.6 168 78.0
CsaV3_7G006180 Cucumis sativus L. HOM05D003620 ORTHO05D004261 7.0e-72 274.6 170 77.1
Lsat_1_v5_gn_7_80501 Lactuca sativa HOM05D003620 ORTHO05D004261 7.0e-72 274.6 170 77.1
Manes.10G117200 Manihot esculenta HOM05D003620 ORTHO05D004261 7.0e-72 274.6 164 82.3
Solyc01g104880.3 Solanum lycopersicum HOM05D003620 ORTHO05D004261 7.0e-72 274.6 168 78.6
ClCG09G013430 Citrullus lanatus HOM05D003620 ORTHO05D004261 9.2e-72 274.2 170 77.6
Sopen01g047400 Solanum pennellii HOM05D003620 ORTHO05D004261 9.2e-72 274.2 168 78.6
DCAR_001444 Daucus carota HOM05D003620 ORTHO05D004261 1.6e-71 273.5 170 78.2
Sed0005951 Sechium edule HOM05D003620 ORTHO05D004261 1.6e-71 273.5 170 77.1
CANSAT11G0919 Cannabis sativa HOM05D003620 ORTHO05D004261 2.0e-71 273.1 164 79.9
Aa31LG3G13090 Aethionema arabicum HOM05D003620 ORTHO05D004261 3.5e-71 272.3 166 78.9
AL161U10010 Arabidopsis lyrata HOM05D003620 ORTHO05D004261 3.5e-71 272.3 167 80.2
CARHR233480 Cardamine hirsuta HOM05D003620 ORTHO05D004261 3.5e-71 272.3 167 80.2
GSVIVG01029732001 Vitis vinifera HOM05D003620 ORTHO05D004261 4.6e-71 271.9 162 79.0
PGR042G1212 Punica granatum HOM05D003620 ORTHO05D004261 6.0e-71 271.6 168 76.2
Carub.0008s1770 Capsella rubella HOM05D003620 ORTHO05D004261 7.8e-71 271.2 169 78.7
Aqoxy6G00354 Aquilegia oxysepala HOM05D003620 ORTHO05D004261 2.3e-70 269.6 170 78.2
PSO541G1613 Papaver somniferum HOM05D003620 ORTHO05D004261 1.1e-69 267.3 167 78.4
Lsat_1_v5_gn_9_117920 Lactuca sativa HOM05D003620 ORTHO05D004261 2.5e-69 266.2 170 75.9
HanXRQChr03g0065791 Helianthus annuus HOM05D003620 ORTHO05D004261 7.3e-69 264.6 170 76.5
PSO675G2802 Papaver somniferum HOM05D003620 ORTHO05D004261 2.1e-68 263.1 167 77.2
AUR62004784 Chenopodium quinoa HOM05D003620 ORTHO05D004261 1.2e-66 257.3 166 77.7
AagrBONN_evm.TU.Sc2ySwM_228.3970 Anthoceros agrestis HOM05D003620 ORTHO05D004261 1.4e-64 250.4 163 74.8
EL10Ac4g08941 Beta vulgaris HOM05D003620 ORTHO05D004261 1.4e-64 250.4 165 75.2
Mapoly0064s0044 Marchantia polymorpha HOM05D003620 ORTHO05D004261 2.4e-64 249.6 170 70.6
Duzib132G0147 Durio zibethinus HOM05D003620 ORTHO05D004261 2.0e-63 246.5 169 73.4
COL.COLO4_20874 Corchorus olitorius HOM05D003620 ORTHO05D004261 4.6e-63 245.4 169 72.8
Hund22190 Selenicereus undatus HOM05D003620 ORTHO05D004261 1.0e-62 244.2 184 68.5
Pp3c15_7420 Physcomitrium patens HOM05D003620 ORTHO05D004261 1.2e-60 237.3 163 71.8
CiPaw.05G039200 Carya illinoinensis HOM05D003620 ORTHO05D004261 2.8e-60 236.1 134 81.3
SMO244G0007 Selaginella moellendorffii HOM05D003620 ORTHO05D004261 4.7e-60 235.3 177 66.1
Oeu037206.2 Olea europaea HOM05D003620 ORTHO05D004261 1.1e-59 234.2 137 80.3
Nitab4.5_0008610g0050 Nicotiana tabacum HOM05D003620 ORTHO05D004261 1.8e-59 233.4 137 81.0
Lj5C243T9 Lonicera japonica HOM05D003620 ORTHO05D004261 1.3e-57 227.3 170 67.6
FAN13G1243 Fragaria x ananassa HOM05D003620 ORTHO05D004261 8.3e-57 224.6 169 68.0
HPP92_019398 Vanilla planifolia HOM05D003620 ORTHO05D004261 1.1e-56 224.2 143 76.2
Peaxi162Scf00152g01227 Petunia axillaris HOM05D003620 ORTHO05D004261 7.1e-56 221.5 166 69.9
Rhsim11G0134200 Rhododendron simsii HOM05D003620 ORTHO05D004261 4.7e-52 208.8 169 63.9
AUR62003395 Chenopodium quinoa HOM05D003620 ORTHO05D004261 1.1e-48 197.6 166 65.7
Lj6g0009012 Lotus japonicus HOM05D003620 ORTHO05D004261 1.6e-47 193.7 156 65.4
MELO3C003259.2 Cucumis melo HOM05D003620 ORTHO05D004261 8.7e-38 161.4 127 63.0
Haze_10770 Corylus avellana HOM05D003620 ORTHO05D004261 3.3e-37 159.5 88 83.0
arahy.Tifrunner.gnm1.ann1.3Q8P58 Arachis hypogaea HOM05D003620 ORTHO05D004261 9.9e-34 147.9 149 55.0
CsaV3_3G020620 Cucumis sativus L. HOM05D003620 ORTHO05D004261 9.9e-34 147.9 113 61.9
BcaC04g22352 Brassica carinata HOM05D003620 ORTHO05D004261 1.1e-32 144.4 91 73.6
arahy.Tifrunner.gnm1.ann1.F2S38R Arachis hypogaea HOM05D003620 ORTHO05D004261 1.9e-32 143.7 88 73.9
CsaV3_6G003040 Cucumis sativus L. HOM05D003620 ORTHO05D004261 3.2e-32 142.9 112 64.3
SEGI_27738 Sequoiadendron giganteum HOM05D003620 ORTHO05D004261 1.2e-31 141.0 89 73.0
C09p20220 Brassica napus HOM05D003620 ORTHO05D004261 4.6e-31 139.0 91 71.4
BolC9t54929H Brassica oleracea HOM05D003620 ORTHO05D004261 4.6e-31 139.0 91 71.4
CBR_g4358 Chara braunii HOM05D003620 ORTHO05D004261 1.5e-29 134.0 162 46.9
Lsat_1_v5_gn_4_179761 Lactuca sativa HOM05D003620 ORTHO05D004261 1.5e-26 124.0 168 45.2
Ciclev10002987m.g Citrus clementina HOM05D003620 ORTHO05D004261 1.1e-24 117.9 75 78.7
SEGI_34524 Sequoiadendron giganteum HOM05D003620 ORTHO05D004261 4.2e-24 115.9 74 73.0
Cre02.g119600 Chlamydomonas reinhardtii HOM05D003620 ORTHO05D004261 5.5e-24 115.5 169 42.0
PRCOL_00006167 Prasinoderma coloniale HOM05D003620 ORTHO05D004261 1.1e-21 107.8 140 43.6
Ciclev10000710m.g Citrus clementina HOM05D003620 ORTHO05D004261 1.6e-20 104.0 58 77.6
arahy.Tifrunner.gnm1.ann1.UIRN9X Arachis hypogaea HOM05D003620 ORTHO05D004261 2.4e-19 100.1 84 61.9
Zm00001eb362570 Zea mays HOM05D003620 ORTHO05D004261 1.3e-17 94.4 58 74.1
MELO3C026793.2 Cucumis melo HOM05D003620 ORTHO05D004261 2.2e-17 93.6 56 73.2
Pp3s32_287 Physcomitrium patens HOM05D003620 ORTHO05D007438 4.9e-17 92.4 158 33.5
GSVIVG01038340001 Vitis vinifera HOM05D003620 ORTHO05D004261 2.5e-16 90.1 62 62.9
C07p07780 Brassica napus HOM05D003620 ORTHO05D004261 4.2e-16 89.4 57 71.9
BolC7t41196H Brassica oleracea HOM05D003620 ORTHO05D004261 4.2e-16 89.4 57 71.9
Ca_29382_v3 Cicer arietinum L. HOM05D003620 ORTHO05D007438 1.6e-15 87.4 174 34.5
Lsat_1_v5_gn_2_44401 Lactuca sativa HOM05D003620 ORTHO05D004261 5.7e-13 79.0 47 72.3
Lalb_Chr25g0281381 Lupinus albus HOM05D003620 ORTHO05D004261 1.2e-10 71.2 40 77.5
Lsat_1_v5_gn_4_137320 Lactuca sativa HOM05D000154 ORTHO05D000092 1.9e-08 63.9 77 48.1
CBR_g85559 Chara braunii HOM05D003620 ORTHO05D004261 7.2e-08 62.0 37 70.3
C07p07760 Brassica napus HOM05D003620 ORTHO05D004261 3.0e-06 56.6 91 39.6
GSVIVG01010110001 Vitis vinifera HOM05D003620 ORTHO05D004261 3.9e-06 56.2 32 75.0
Aa31LG6G2040 Aethionema arabicum HOM05D003620 ORTHO05D004261 6.7e-06 55.5 41 61.0


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