Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 4.5e-125 451.4 254 100.0
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 5.9e-77 291.6 243 64.2
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 1.2e-74 283.9 258 64.0
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 1.6e-74 283.5 293 52.6
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 4.7e-74 282.0 260 62.7
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 6.1e-74 281.6 236 66.9
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 1.2e-72 277.3 278 59.4
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 2.2e-71 273.1 238 60.9
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 6.3e-71 271.6 240 67.1
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 2.4e-70 269.6 273 57.9
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 4.1e-70 268.9 263 58.9
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 9.1e-70 267.7 252 53.6
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 5.9e-69 265.0 241 65.6
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 5.9e-69 265.0 224 67.9
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 1.0e-68 264.2 246 68.3
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 1.7e-68 263.5 240 62.1
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 3.8e-68 262.3 226 70.4
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 5.0e-68 261.9 237 65.8
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 6.5e-68 261.5 280 57.5
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 1.1e-67 260.8 232 67.2
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 1.2e-66 257.3 252 61.5
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 1.6e-66 256.9 229 67.7
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 8.0e-66 254.6 249 63.9
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 8.0e-66 254.6 268 53.7
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 1.0e-65 254.2 238 63.9
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 5.2e-65 251.9 251 59.0
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 1.2e-64 250.8 236 64.0
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 2.0e-64 250.0 244 60.2
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 2.0e-64 250.0 225 59.6
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 3.4e-64 249.2 275 57.1
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 5.7e-64 248.4 232 64.2
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 9.8e-64 247.7 232 66.4
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 1.1e-62 244.2 244 61.9
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 1.8e-62 243.4 254 52.8
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 3.1e-62 242.7 240 62.5
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 5.4e-62 241.9 235 60.9
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 1.2e-61 240.7 280 47.9
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 1.6e-61 240.4 234 63.7
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 2.7e-61 239.6 223 63.7
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 2.7e-61 239.6 223 63.7
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 2.7e-61 239.6 254 52.0
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 4.5e-61 238.8 233 66.5
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 5.9e-61 238.4 245 59.2
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 1.0e-60 237.7 257 54.9
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 1.0e-60 237.7 244 54.9
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 1.3e-60 237.3 240 61.7
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 1.3e-60 237.3 240 61.7
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 1.3e-60 237.3 240 61.7
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 1.3e-60 237.3 258 55.8
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 2.3e-60 236.5 240 61.7
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 6.6e-60 235.0 240 61.2
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 8.6e-60 234.6 239 61.5
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 1.1e-59 234.2 239 56.5
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 1.5e-59 233.8 249 59.4
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 2.5e-59 233.0 275 57.5
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 2.5e-59 233.0 247 52.2
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 4.3e-59 232.3 226 61.1
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 4.3e-59 232.3 202 55.4
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 5.6e-59 231.9 223 59.2
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 7.3e-59 231.5 237 58.2
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 1.6e-58 230.3 227 62.1
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 3.6e-58 229.2 221 64.7
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 4.7e-58 228.8 167 67.1
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 1.4e-57 227.3 230 55.2
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 1.8e-57 226.9 218 62.8
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 5.2e-57 225.3 234 60.7
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 6.8e-57 224.9 232 55.6
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 4.4e-56 222.2 241 57.7
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 7.5e-56 221.5 223 61.9
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 1.3e-55 220.7 279 53.0
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 3.7e-55 219.2 235 59.6
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 6.4e-55 218.4 281 53.7
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 8.3e-55 218.0 214 65.9
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 1.4e-54 217.2 276 56.5
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 1.4e-54 217.2 231 57.1
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 1.8e-54 216.9 238 56.7
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 2.4e-54 216.5 233 60.9
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 7.0e-54 214.9 227 60.8
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 7.0e-54 214.9 201 54.2
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 7.0e-54 214.9 216 64.4
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 2.0e-53 213.4 279 47.3
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 7.8e-53 211.5 244 55.7
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 1.0e-52 211.1 244 58.2
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 5.0e-52 208.8 242 59.1
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 8.6e-52 208.0 160 62.5
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 1.9e-51 206.8 240 56.7
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 2.1e-50 203.4 165 72.7
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 8.0e-50 201.4 250 53.6
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 1.0e-49 201.1 237 57.8
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 1.8e-49 200.3 282 52.1
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 1.9e-46 190.3 197 61.4
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 7.0e-46 188.3 132 70.5
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 1.2e-45 187.6 157 73.2
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 1.6e-45 187.2 214 62.1
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 1.6e-45 187.2 214 62.1
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 3.0e-44 183.0 269 44.2
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 1.5e-43 180.6 224 57.1
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 1.3e-39 167.5 213 55.9
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 1.9e-38 163.7 274 44.9
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 4.6e-37 159.1 155 50.3
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 3.0e-36 156.4 192 43.8
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 3.0e-36 156.4 223 39.9
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 1.3e-31 141.0 168 41.7
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 3.8e-31 139.4 146 50.7
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 2.4e-30 136.7 115 57.4
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 2.3e-28 130.2 155 42.6
Sed0025568 Sechium edule HOM05D006314 ORTHO05D007970 3.0e-28 129.8 214 46.7
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 7.3e-27 125.2 123 50.4
Peaxi162Scf00781g00047 Petunia axillaris HOM05D006314 ORTHO05D007970 3.1e-25 119.8 267 33.3
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 3.2e-22 109.8 108 52.8
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 5.4e-22 109.0 235 30.2
MSTRG.16127 Avicennia marina HOM05D006314 ORTHO05D007970 7.1e-22 108.6 104 51.9
CSS0018641 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 1.1e-19 101.3 106 69.8
SMO361G0013 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 2.9e-15 86.7 217 28.6
FAN25G3594 Fragaria x ananassa HOM05D006314 ORTHO05D007970 2.7e-13 80.1 43 83.7
Os07g0134400 Oryza sativa ssp. japonica HOM05D006314 ORTHO05D007970 1.3e-12 77.8 134 48.5
Medtr7g047660 Medicago truncatula HOM05D052963 ORTHO05D007970 7.6e-08 62.0 47 68.1
QL08p032503 Quercus lobata HOM05D006314 ORTHO05D030082 2.9e-07 60.1 70 48.6
MD10G1313900 Malus domestica HOM05D006314 ORTHO05D030082 6.4e-07 58.9 35 71.4
QL05p075461 Quercus lobata HOM05D006314 ORTHO05D030082 2.4e-06 57.0 48 54.2
FvH4_3g02750 Fragaria vesca HOM05D006314 ORTHO05D007970 3.2e-06 56.6 43 67.4
MD10G1314000 Malus domestica HOM05D006314 ORTHO05D007970 9.3e-06 55.1 37 64.9
Sp7g19320 Schrenkiella parvula HOM05D006314 ORTHO05D007970 9.3e-06 55.1 122 32.0


User provided reference genes

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