Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc74.89 Carica papaya HOM05D006268 ORTHO05D008118 2.2e-88 328.9 167 100.0
Cfa010996 Carpinus fangiana HOM05D006268 ORTHO05D008118 3.8e-48 195.3 178 60.7
CANSAT54G1338 Cannabis sativa HOM05D006268 ORTHO05D008118 4.9e-48 194.9 178 63.5
MD00G1098400 Malus domestica HOM05D006268 ORTHO05D008118 6.5e-48 194.5 176 61.4
FvH4_7g08020 Fragaria vesca HOM05D006268 ORTHO05D008118 4.2e-47 191.8 176 61.4
FAN06G0712 Fragaria x ananassa HOM05D006268 ORTHO05D008118 4.2e-47 191.8 176 61.4
CiPaw.13G019100 Carya illinoinensis HOM05D006268 ORTHO05D008118 1.6e-46 189.9 180 60.0
Haze_02942 Corylus avellana HOM05D006268 ORTHO05D008118 1.6e-46 189.9 178 58.4
FAN03G0807 Fragaria x ananassa HOM05D006268 ORTHO05D008118 3.5e-46 188.7 176 60.2
RcHm_v2.0_Chr1g0341291 Rosa chinensis HOM05D006268 ORTHO05D008118 1.0e-45 187.2 176 59.7
arahy.Tifrunner.gnm1.ann1.V3PJPX Arachis hypogaea HOM05D006268 ORTHO05D008118 1.3e-45 186.8 143 72.0
ClCG05G002670 Citrullus lanatus HOM05D006268 ORTHO05D008118 1.8e-45 186.4 162 61.1
arahy.Tifrunner.gnm1.ann1.EHLP6C Arachis hypogaea HOM05D006268 ORTHO05D008118 3.9e-45 185.3 143 71.3
MELO3C006233.2 Cucumis melo HOM05D006268 ORTHO05D008118 3.9e-45 185.3 181 56.9
Prupe.2G109200 Prunus persica HOM05D006268 ORTHO05D008118 1.1e-44 183.7 176 59.7
Sabra02G0181600 Salix brachista HOM05D006268 ORTHO05D008118 2.5e-44 182.6 176 56.2
CsaV3_3G010120 Cucumis sativus L. HOM05D006268 ORTHO05D008118 3.7e-43 178.7 181 55.8
Potri.002G238300 Populus trichocarpa HOM05D006268 ORTHO05D008118 4.8e-43 178.3 176 55.1
GSVIVG01016051001 Vitis vinifera HOM05D006268 ORTHO05D008118 4.8e-43 178.3 177 57.1
Manes.08G055700 Manihot esculenta HOM05D006268 ORTHO05D008118 6.3e-43 177.9 174 57.5
Dinv43994 Davidia involucrata HOM05D006268 ORTHO05D008118 1.8e-42 176.4 178 56.2
TWI59G0917 Tripterygium wilfordii HOM05D006268 ORTHO05D008118 4.1e-42 175.3 176 58.5
Sed0013667 Sechium edule HOM05D006268 ORTHO05D008118 6.9e-42 174.5 179 54.7
EL10Ac1g00692 Beta vulgaris HOM05D006268 ORTHO05D008118 9.0e-42 174.1 184 53.3
Thecc.03G001300 Theobroma cacao HOM05D006268 ORTHO05D008118 9.0e-42 174.1 178 55.1
QL04p024264 Quercus lobata HOM05D006268 ORTHO05D008118 3.4e-41 172.2 202 51.0
Hund26937 Selenicereus undatus HOM05D006268 ORTHO05D008118 1.0e-40 170.6 192 52.1
CSS0005578 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 1.3e-40 170.2 176 54.0
Lj3g0019214 Lotus japonicus HOM05D006268 ORTHO05D008118 1.3e-40 170.2 177 56.5
FAN01G0355 Fragaria x ananassa HOM05D006268 ORTHO05D008118 1.7e-40 169.9 220 49.1
Migut.N01815 Erythranthe guttata HOM05D006268 ORTHO05D008118 2.2e-40 169.5 183 52.5
Gohir.A06G169600 Gossypium hirsutum HOM05D006268 ORTHO05D008118 2.2e-40 169.5 175 54.9
Psat4g207400 Pisum sativum HOM05D006268 ORTHO05D008118 2.2e-40 169.5 177 55.9
Nitab4.5_0001209g0060 Nicotiana tabacum HOM05D006268 ORTHO05D008118 2.9e-40 169.1 177 54.8
Nitab4.5_0001476g0040 Nicotiana tabacum HOM05D006268 ORTHO05D008118 3.8e-40 168.7 177 53.7
AUR62013813 Chenopodium quinoa HOM05D006268 ORTHO05D008118 6.5e-40 167.9 190 51.6
Glyma.03G093200 Glycine max HOM05D006268 ORTHO05D008118 6.5e-40 167.9 183 53.6
Lalb_Chr07g0194551 Lupinus albus HOM05D006268 ORTHO05D008118 6.5e-40 167.9 180 54.4
TAR375G0229 Trochodendron aralioides HOM05D006268 ORTHO05D008118 8.5e-40 167.5 177 53.7
Glyma.16G080700 Glycine max HOM05D006268 ORTHO05D008118 1.9e-39 166.4 183 53.6
Ciclev10021110m.g Citrus clementina HOM05D006268 ORTHO05D008118 2.5e-39 166.0 178 53.4
vmacro21105 Vaccinium macrocarpon HOM05D006268 ORTHO05D008118 3.2e-39 165.6 178 53.4
DCAR_029548 Daucus carota HOM05D006268 ORTHO05D008118 4.2e-39 165.2 180 53.3
Gorai.N008000 Gossypium raimondii HOM05D006268 ORTHO05D008118 4.2e-39 165.2 181 53.6
Lj7C555G14 Lonicera japonica HOM05D006268 ORTHO05D008118 9.3e-39 164.1 182 52.2
PGR083G0810 Punica granatum HOM05D006268 ORTHO05D008118 9.3e-39 164.1 178 53.9
AUR62023342 Chenopodium quinoa HOM05D006268 ORTHO05D008118 1.2e-38 163.7 192 49.5
Ca_23170_v3 Cicer arietinum L. HOM05D006268 ORTHO05D008118 1.2e-38 163.7 177 55.4
FAN10G2079 Fragaria x ananassa HOM05D006268 ORTHO05D008118 1.2e-38 163.7 114 75.4
Medtr8g010550 Medicago truncatula HOM05D006268 ORTHO05D008118 2.1e-38 162.9 172 53.5
Actinidia33290 Actinidia chinensis HOM05D006268 ORTHO05D008118 2.7e-38 162.5 181 52.5
COL.COLO4_19510 Corchorus olitorius HOM05D006268 ORTHO05D006513 2.7e-38 162.5 167 55.1
Phvul.010G033866 Phaseolus vulgaris HOM05D006268 ORTHO05D008118 4.6e-38 161.8 183 51.9
Rhsim01G0145800 Rhododendron simsii HOM05D006268 ORTHO05D008118 6.1e-38 161.4 178 52.8
Sopen01g032530 Solanum pennellii HOM05D006268 ORTHO05D008118 2.3e-37 159.5 177 52.0
MSTRG.4977 Avicennia marina HOM05D006268 ORTHO05D008118 3.0e-37 159.1 189 48.7
Eucgr.D01130 Eucalyptus grandis HOM05D006268 ORTHO05D008118 3.0e-37 159.1 184 49.5
Ah.06g189690 Amaranthus hybridus HOM05D006268 ORTHO05D008118 3.9e-37 158.7 200 50.0
Solyc01g080940.3 Solanum lycopersicum HOM05D006268 ORTHO05D008118 6.7e-37 157.9 177 51.4
VMungo0331G0592 Vigna mungo HOM05D006268 ORTHO05D008118 6.7e-37 157.9 183 51.4
Lsat_1_v5_gn_7_10860 Lactuca sativa HOM05D006268 ORTHO05D008118 8.8e-37 157.5 158 55.1
Sc26g0001930 Simmondsia chinensis HOM05D006268 ORTHO05D008118 8.8e-37 157.5 178 51.1
PGSC0003DMG400001820 Solanum tuberosum HOM05D006268 ORTHO05D008118 1.5e-36 156.8 177 50.8
CAN.G1551.1 Capsicum annuum HOM05D006268 ORTHO05D008118 1.9e-36 156.4 177 50.8
Nn1g00551 Nelumbo nucifera HOM05D006268 ORTHO05D008118 2.5e-36 156.0 175 51.4
TPR.G9770 Trifolium pratense HOM05D006268 ORTHO05D008118 2.5e-36 156.0 186 47.8
PSO782G1498 Papaver somniferum HOM05D006268 ORTHO05D008118 3.3e-36 155.6 177 50.8
HanXRQChr04g0123661 Helianthus annuus HOM05D006268 ORTHO05D008118 4.3e-36 155.2 171 50.3
Aqoxy3G02409 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 5.7e-36 154.8 190 49.5
Cc02_g26120 Coffea canephora HOM05D006268 ORTHO05D008118 1.3e-35 153.7 177 50.3
PSO063G1446 Papaver somniferum HOM05D006268 ORTHO05D008118 1.7e-35 153.3 177 50.3
Aqoxy3G02437 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 2.8e-35 152.5 179 51.4
SalBow4G0743 Salvia bowleyana HOM05D006268 ORTHO05D008118 8.2e-35 151.0 161 53.4
Atru.BG.53.p Acer truncatum HOM05D006268 ORTHO05D008118 9.1e-34 147.5 163 55.8
ATR0049G059 Amborella trichopoda HOM05D006268 ORTHO05D008118 2.6e-33 146.0 178 47.2
ECA236G2174 Erigeron canadensis HOM05D006268 ORTHO05D008118 2.6e-33 146.0 180 49.4
Aa31LG11G10 Aethionema arabicum HOM05D006268 ORTHO05D008118 7.7e-33 144.4 173 49.1
unitig_22.g5778 Utricularia gibba HOM05D006268 ORTHO05D008118 3.8e-32 142.1 175 48.6
CARHR272020 Cardamine hirsuta HOM05D006268 ORTHO05D008118 5.0e-32 141.7 166 50.0
CSS0033423 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 1.4e-31 140.2 163 50.3
Duzib128G0100 Durio zibethinus HOM05D006268 ORTHO05D008118 3.2e-31 139.0 92 75.0
Carub.0008s1876 Capsella rubella HOM05D006268 ORTHO05D008118 1.2e-30 137.1 158 50.0
AT5G58220 Arabidopsis thaliana HOM05D006268 ORTHO05D008118 1.6e-30 136.7 174 47.7
DCAR_025012 Daucus carota HOM05D006268 ORTHO05D008118 1.6e-30 136.7 158 51.9
Thhalv10014126m.g Eutrema salsugineum HOM05D006268 ORTHO05D008118 1.6e-30 136.7 158 48.7
A02p07860 Brassica napus HOM05D006268 ORTHO05D008118 2.7e-30 136.0 168 48.2
Sp6g19880 Schrenkiella parvula HOM05D006268 ORTHO05D008118 2.7e-30 136.0 175 44.6
BcaB05g22409 Brassica carinata HOM05D006268 ORTHO05D008118 4.7e-30 135.2 166 47.0
BraA02t05859Z Brassica rapa HOM05D006268 ORTHO05D008118 1.4e-29 133.7 165 47.9
CDE04G2879 Ceratophyllum demersum HOM05D006268 ORTHO05D008118 1.8e-29 133.3 159 45.3
BcaC03g14111 Brassica carinata HOM05D006268 ORTHO05D008118 2.6e-28 129.4 165 46.7
AL8G34320 Arabidopsis lyrata HOM05D006268 ORTHO05D008118 4.4e-28 128.6 174 45.4
THA.LOC104799599 Tarenaya hassleriana HOM05D006268 ORTHO05D008118 7.4e-28 127.9 162 46.9
C02p13500 Brassica napus HOM05D006268 ORTHO05D008118 1.3e-27 127.1 158 47.5
BolC2t07462H Brassica oleracea HOM05D006268 ORTHO05D008118 1.3e-27 127.1 158 47.5
SEGI_16160 Sequoiadendron giganteum HOM05D006268 ORTHO05D008118 2.8e-27 125.9 161 46.6
HPP92_028001 Vanilla planifolia HOM05D006268 ORTHO05D008118 6.9e-26 121.3 161 43.5
Os03g0390700 Oryza sativa ssp. japonica HOM05D006268 ORTHO05D008118 1.3e-24 117.1 172 43.6
Zm00001eb392560 Zea mays HOM05D006268 ORTHO05D008118 1.3e-24 117.1 186 40.3
Pp3c4_10360 Physcomitrium patens HOM05D006268 ORTHO05D008118 1.1e-23 114.0 175 41.7
AagrBONN_evm.TU.Sc2ySwM_228.2734 Anthoceros agrestis HOM05D006268 ORTHO05D008118 3.3e-20 102.4 148 41.9
SMO367G0371 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 4.4e-20 102.1 157 40.1
CBR_g30589 Chara braunii HOM05D006268 ORTHO05D008118 6.3e-19 98.2 170 37.1
Oeu050272.1 Olea europaea HOM05D006268 ORTHO05D008118 6.3e-19 98.2 74 59.5
Mapoly0090s0043 Marchantia polymorpha HOM05D006268 ORTHO05D008118 9.1e-18 94.4 152 40.1
Hma1.2p1_0076F.1_g039600 Hydrangea macrophylla HOM05D006268 ORTHO05D008118 5.9e-17 91.7 57 66.7
MCO07G440 Micromonas commoda HOM05D006268 ORTHO05D008118 3.8e-16 89.0 152 37.5
Cfa010995 Carpinus fangiana HOM05D006268 ORTHO05D008118 5.0e-16 88.6 58 75.9
SMO367G0431 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 6.5e-16 88.2 161 37.3
SMO197G0011 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 1.5e-15 87.0 146 39.0
PRCOL_00004243 Prasinoderma coloniale HOM05D006268 ORTHO05D008118 2.0e-12 76.6 187 32.1
Cre17.g735950 Chlamydomonas reinhardtii HOM05D006268 ORTHO05D008118 5.7e-12 75.1 163 28.8
MD02G1236900 Malus domestica HOM05D006268 ORTHO05D008118 7.7e-09 64.7 56 62.5
Dinv43550 Davidia involucrata HOM05D006268 ORTHO05D008118 7.2e-07 58.2 57 57.9
SHI28985 Sapria himalayana HOM05D000023 ORTHO05D000014 1.6e-06 57.0 62 51.6
SGA_v2.0_scaffold95G28736 Striga asiatica HOM05D006268 ORTHO05D008118 4.7e-06 55.5 44 61.4


User provided reference genes

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