Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc7.54 Carica papaya HOM05D005873 ORTHO05D007582 0.0e+00 1098.6 541 100.0
Prupe.4G060100 Prunus persica HOM05D005873 ORTHO05D007582 7.5e-247 857.1 524 79.2
Duzib192G0329 Durio zibethinus HOM05D005873 ORTHO05D007582 2.7e-244 848.6 523 79.5
COL.COLO4_05490 Corchorus olitorius HOM05D005873 ORTHO05D007582 7.8e-244 847.0 526 77.6
Ciclev10014429m.g Citrus clementina HOM05D005873 ORTHO05D007582 1.5e-242 842.8 523 79.2
Thecc.06G172000 Theobroma cacao HOM05D005873 ORTHO05D007582 2.5e-242 842.0 526 77.4
MD10G1281000 Malus domestica HOM05D005873 ORTHO05D007582 4.3e-242 841.3 525 78.5
RcHm_v2.0_Chr5g0010641 Rosa chinensis HOM05D005873 ORTHO05D007582 7.3e-242 840.5 524 78.1
Gohir.D05G158500 Gossypium hirsutum HOM05D005873 ORTHO05D007582 3.6e-241 838.2 526 77.6
Cfa000601 Carpinus fangiana HOM05D005873 ORTHO05D007582 4.7e-241 837.8 523 77.8
Gorai.009G163500 Gossypium raimondii HOM05D005873 ORTHO05D007582 2.3e-240 835.5 526 77.4
TWI38G0673 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 1.3e-238 829.7 523 77.4
CiPaw.10G058200 Carya illinoinensis HOM05D005873 ORTHO05D007582 1.7e-238 829.3 523 77.2
GSVIVG01021202001 Vitis vinifera HOM05D005873 ORTHO05D007582 1.7e-238 829.3 523 76.7
MD05G1302300 Malus domestica HOM05D005873 ORTHO05D007582 2.2e-238 828.9 525 77.7
TWI63G0032 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 4.9e-238 827.8 525 76.6
Gohir.A05G155800 Gossypium hirsutum HOM05D005873 ORTHO05D007582 5.4e-237 824.3 526 76.4
CANSAT35G0525 Cannabis sativa HOM05D005873 ORTHO05D007582 2.7e-236 822.0 526 76.2
TAR627G0247 Trochodendron aralioides HOM05D005873 ORTHO05D007582 6.0e-236 820.8 523 77.2
Dinv04615 Davidia involucrata HOM05D005873 ORTHO05D007582 1.3e-235 819.7 523 76.1
FAN21G0636 Fragaria x ananassa HOM05D005873 ORTHO05D007582 3.9e-235 818.1 529 75.8
Nn1g09089 Nelumbo nucifera HOM05D005873 ORTHO05D007582 3.3e-234 815.1 519 75.0
FAN11G2228 Fragaria x ananassa HOM05D005873 ORTHO05D007582 4.3e-234 814.7 529 76.6
FvH4_3g07910 Fragaria vesca HOM05D005873 ORTHO05D007582 5.6e-234 814.3 529 76.4
Manes.17G054900 Manihot esculenta HOM05D005873 ORTHO05D007582 1.6e-233 812.8 526 76.4
Nn1g04384 Nelumbo nucifera HOM05D005873 ORTHO05D007582 8.9e-232 807.0 516 74.8
arahy.Tifrunner.gnm1.ann1.IZWY79 Arachis hypogaea HOM05D005873 ORTHO05D007582 5.8e-231 804.3 525 76.0
Lalb_Chr03g0024111 Lupinus albus HOM05D005873 ORTHO05D007582 5.8e-231 804.3 523 75.3
FAN16G2124 Fragaria x ananassa HOM05D005873 ORTHO05D007582 1.7e-230 802.7 531 75.5
Phvul.011G010700 Phaseolus vulgaris HOM05D005873 ORTHO05D007582 4.1e-229 798.1 523 75.0
Ca_21328_v3 Cicer arietinum L. HOM05D005873 ORTHO05D007582 9.2e-229 797.0 523 75.3
CSS0049485 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 1.6e-228 796.2 523 75.0
Eucgr.B01514 Eucalyptus grandis HOM05D005873 ORTHO05D007582 2.7e-228 795.4 526 73.6
VMungo1127G0781 Vigna mungo HOM05D005873 ORTHO05D007582 4.6e-228 794.7 523 75.3
Peaxi162Scf00010g03612 Petunia axillaris HOM05D005873 ORTHO05D007582 4.3e-226 788.1 525 72.8
arahy.Tifrunner.gnm1.ann1.6H0VZY Arachis hypogaea HOM05D005873 ORTHO05D007582 1.6e-225 786.2 517 75.4
CSS0045323 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 2.8e-225 785.4 523 74.4
Solyc11g068930.3 Solanum lycopersicum HOM05D005873 ORTHO05D007582 2.8e-225 785.4 527 71.9
Medtr0003s0540 Medicago truncatula HOM05D005873 ORTHO05D007582 4.7e-225 784.6 524 74.8
Sabra04G0036300 Salix brachista HOM05D005873 ORTHO05D007582 6.2e-225 784.3 526 75.3
Glyma.12G010000 Glycine max HOM05D005873 ORTHO05D007582 1.1e-224 783.5 522 74.3
QL05p046535 Quercus lobata HOM05D005873 ORTHO05D007582 1.1e-224 783.5 605 66.8
Lj3g0011702 Lotus japonicus HOM05D005873 ORTHO05D007582 1.4e-224 783.1 517 74.3
PSO541G6035 Papaver somniferum HOM05D005873 ORTHO05D007582 4.0e-224 781.6 515 74.8
CAN.G689.28 Capsicum annuum HOM05D005873 ORTHO05D007582 5.2e-224 781.2 525 72.4
Nitab4.5_0000158g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 8.9e-224 780.4 525 71.8
PGR004G0809 Punica granatum HOM05D005873 ORTHO05D007582 1.5e-223 779.6 520 74.2
TPR.G8345 Trifolium pratense HOM05D005873 ORTHO05D007582 1.5e-223 779.6 526 73.6
Lsat_1_v5_gn_7_23000 Lactuca sativa HOM05D005873 ORTHO05D007582 4.4e-223 778.1 528 73.5
DCAR_028009 Daucus carota HOM05D005873 ORTHO05D007582 5.8e-223 777.7 523 72.3
PSO675G7532 Papaver somniferum HOM05D005873 ORTHO05D007582 9.9e-223 776.9 515 74.4
MELO3C007214.2 Cucumis melo HOM05D005873 ORTHO05D007582 1.7e-222 776.2 526 73.2
PGSC0003DMG400019634 Solanum tuberosum HOM05D005873 ORTHO05D007582 1.7e-222 776.2 526 71.5
Aqoxy4G00415 Aquilegia oxysepala HOM05D005873 ORTHO05D007582 2.2e-222 775.8 516 72.9
ECA236G1606 Erigeron canadensis HOM05D005873 ORTHO05D007582 2.9e-222 775.4 524 73.3
Oeu039925.1 Olea europaea HOM05D005873 ORTHO05D007582 3.8e-222 775.0 523 72.8
MBI06_g25992_MAGBIO Magnolia biondii HOM05D005873 ORTHO05D007582 6.4e-222 774.2 521 71.6
Sed0012124 Sechium edule HOM05D005873 ORTHO05D007582 6.4e-222 774.2 526 73.4
Potri.004G055600 Populus trichocarpa HOM05D005873 ORTHO05D007582 1.9e-221 772.7 526 74.0
Sopen11g027640 Solanum pennellii HOM05D005873 ORTHO05D007582 1.9e-221 772.7 527 71.0
FAN25G0256 Fragaria x ananassa HOM05D005873 ORTHO05D007582 1.0e-219 766.9 493 76.9
ClCG01G023710 Citrullus lanatus HOM05D005873 ORTHO05D007582 3.0e-219 765.4 524 72.5
Nitab4.5_0003937g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 5.1e-219 764.6 540 69.4
CsaV3_6G050860 Cucumis sativus L. HOM05D005873 ORTHO05D007582 7.3e-218 760.8 526 71.5
Lj1C1193T7 Lonicera japonica HOM05D005873 ORTHO05D007582 2.1e-217 759.2 524 71.8
Aa31LG9G7130 Aethionema arabicum HOM05D005873 ORTHO05D007582 2.8e-217 758.8 516 71.9
Rhsim13G0191000 Rhododendron simsii HOM05D005873 ORTHO05D007582 3.6e-217 758.4 538 70.6
AL8G12650 Arabidopsis lyrata HOM05D005873 ORTHO05D007582 2.4e-216 755.7 524 70.8
Atru.chr10.1680 Acer truncatum HOM05D005873 ORTHO05D007582 6.9e-216 754.2 476 77.9
CARHR176060 Cardamine hirsuta HOM05D005873 ORTHO05D007582 9.9e-215 750.4 517 71.6
AT5G45900 Arabidopsis thaliana HOM05D005873 ORTHO05D007582 4.9e-214 748.0 524 70.6
EL10Ac8g20512 Beta vulgaris HOM05D005873 ORTHO05D007582 8.4e-214 747.3 528 69.5
vmacro01547 Vaccinium macrocarpon HOM05D005873 ORTHO05D007582 8.4e-214 747.3 527 69.3
HanXRQChr13g0397371 Helianthus annuus HOM05D005873 ORTHO05D007582 1.9e-213 746.1 523 70.6
SalBow8G4573 Salvia bowleyana HOM05D005873 ORTHO05D007582 9.3e-213 743.8 517 70.6
Migut.M01045 Erythranthe guttata HOM05D005873 ORTHO05D007582 2.1e-212 742.7 524 70.8
Thhalv10000804m.g Eutrema salsugineum HOM05D005873 ORTHO05D007582 3.5e-212 741.9 512 71.3
BraA02t07971Z Brassica rapa HOM05D005873 ORTHO05D007582 1.3e-211 740.0 518 70.7
BolC2t10723H Brassica oleracea HOM05D005873 ORTHO05D007582 3.0e-211 738.8 518 70.3
A02p29440 Brassica napus HOM05D005873 ORTHO05D007582 5.1e-211 738.0 518 70.7
C02p46710 Brassica napus HOM05D005873 ORTHO05D007582 5.1e-211 738.0 518 70.5
MSTRG.16147 Avicennia marina HOM05D005873 ORTHO05D007582 4.3e-210 734.9 523 68.8
THA.LOC104806153 Tarenaya hassleriana HOM05D005873 ORTHO05D007582 4.3e-210 734.9 520 69.6
HanXRQChr05g0156521 Helianthus annuus HOM05D005873 ORTHO05D007582 5.6e-210 734.6 523 69.4
Sp2g10820 Schrenkiella parvula HOM05D005873 ORTHO05D007582 1.8e-208 729.6 525 69.1
BcaC03g16799 Brassica carinata HOM05D005873 ORTHO05D007582 4.9e-206 721.5 518 69.5
AUR62036593 Chenopodium quinoa HOM05D005873 ORTHO05D007582 9.3e-205 717.2 521 67.4
Ah.14g087180 Amaranthus hybridus HOM05D005873 ORTHO05D007582 3.0e-195 685.6 522 64.9
ATR0733G019 Amborella trichopoda HOM05D005873 ORTHO05D007582 8.7e-195 684.1 514 65.4
Cc11_g13830 Coffea canephora HOM05D005873 ORTHO05D007582 8.7e-195 684.1 526 65.6
Hund21181 Selenicereus undatus HOM05D005873 ORTHO05D007582 4.5e-191 671.8 578 59.7
Carub.0008s0205 Capsella rubella HOM05D005873 ORTHO05D007582 7.1e-189 664.5 492 66.9
Psat7g197320 Pisum sativum HOM05D005873 ORTHO05D007582 2.5e-186 656.0 523 66.0
AUR62031177 Chenopodium quinoa HOM05D005873 ORTHO05D007582 6.3e-185 651.4 535 62.6
SEGI_08778 Sequoiadendron giganteum HOM05D005873 ORTHO05D007582 1.6e-177 626.7 530 61.5
Sc17g0005780 Simmondsia chinensis HOM05D005873 ORTHO05D007582 2.6e-175 619.4 413 74.1
Dinv40666 Davidia involucrata HOM05D005873 ORTHO05D007582 4.7e-164 582.0 373 75.1
SGA_v2.0_scaffold1G00037 Striga asiatica HOM05D005873 ORTHO05D007582 1.7e-158 563.5 524 57.8
CSS0029481 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 7.5e-154 548.1 513 57.9
AagrBONN_evm.TU.Sc2ySwM_117.2340 Anthoceros agrestis HOM05D005873 ORTHO05D007582 6.5e-150 535.0 512 54.1
Pp3c24_8100 Physcomitrium patens HOM05D005873 ORTHO05D007582 1.9e-149 533.5 511 54.0
CBR_g39927 Chara braunii HOM05D005873 ORTHO05D007582 6.8e-147 525.0 556 50.9
Eucgr.B01507 Eucalyptus grandis HOM05D005873 ORTHO05D007582 4.7e-140 502.3 336 73.2
CBR_g50802 Chara braunii HOM05D005873 ORTHO05D007582 3.1e-136 489.6 519 51.1
SMO367G0884 Selaginella moellendorffii HOM05D005873 ORTHO05D007582 1.1e-133 481.1 516 50.0
Actinidia16800 Actinidia chinensis HOM05D005873 ORTHO05D007582 1.5e-122 444.1 334 69.8
Os01g0614900 Oryza sativa ssp. japonica HOM05D005873 ORTHO05D007582 4.3e-117 426.0 508 45.9
PRCOL_00005698 Prasinoderma coloniale HOM05D005873 ORTHO05D007582 5.6e-117 425.6 512 47.9
CDE08G0418 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 2.2e-113 413.7 303 68.3
Zm00001eb358160 Zea mays HOM05D005873 ORTHO05D007582 1.2e-111 407.9 355 58.9
Cre03.g165215 Chlamydomonas reinhardtii HOM05D005873 ORTHO05D007582 4.6e-111 406.0 475 48.0
MCO13G516 Micromonas commoda HOM05D005873 ORTHO05D007582 1.7e-110 404.1 527 46.1
Cfa025052 Carpinus fangiana HOM05D005873 ORTHO05D007582 1.9e-109 400.6 485 45.2
Haze_26854 Corylus avellana HOM05D005873 ORTHO05D007582 4.7e-108 396.0 506 42.1
Mapoly0015s0071 Marchantia polymorpha HOM05D005873 ORTHO05D007582 6.0e-87 325.9 306 56.2
SHI28554 Sapria himalayana HOM05D005873 ORTHO05D007582 6.4e-81 305.8 313 53.7
Haze_06243 Corylus avellana HOM05D005873 ORTHO05D007582 7.1e-80 302.4 189 76.2
unitig_0.g713 Utricularia gibba HOM05D005873 ORTHO05D007582 4.5e-66 256.5 196 65.8
TPR.G23454 Trifolium pratense HOM05D001972 ORTHO05D002555 1.5e-53 214.9 132 76.5
Haze_06244 Corylus avellana HOM05D005873 ORTHO05D007582 5.3e-43 179.9 112 77.7
SHI28555 Sapria himalayana HOM05D005873 ORTHO05D007582 2.7e-39 167.5 102 78.4
Psat0s133g0080 Pisum sativum HOM05D005873 ORTHO05D007582 2.0e-34 151.4 185 51.4
Potri.011G065402 Populus trichocarpa HOM05D005873 ORTHO05D007582 7.5e-29 132.9 110 64.5
Sabra11G0047200 Salix brachista HOM05D005873 ORTHO05D007582 5.5e-24 116.7 61 88.5
Lsat_1_v5_gn_1_96960 Lactuca sativa HOM05D001670 ORTHO05D002980 1.8e-22 111.7 148 44.6
Lsat_1_v5_gn_9_10320 Lactuca sativa HOM05D001670 ORTHO05D002980 1.1e-19 102.4 94 54.3
Lsat_1_v5_gn_4_5981 Lactuca sativa HOM05D005873 ORTHO05D002980 4.3e-16 90.5 59 71.2
SHI28556 Sapria himalayana HOM05D005873 ORTHO05D007582 5.6e-08 63.5 62 50.0
RcHm_v2.0_Chr2g0132441 Rosa chinensis HOM05D005873 ORTHO05D007582 2.8e-07 61.2 60 55.0


User provided reference genes

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