Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc57.78 Carica papaya HOM05D001251 ORTHO05D004135 2.7e-286 988.0 527 100.0
Duzib138G1188 Durio zibethinus HOM05D001251 ORTHO05D004135 3.1e-173 612.5 537 67.2
QL08p047700 Quercus lobata HOM05D001251 ORTHO05D004135 2.8e-166 589.3 536 64.4
Thecc.01G332000 Theobroma cacao HOM05D001251 ORTHO05D004135 1.0e-163 580.9 534 64.6
Dinv34262 Davidia involucrata HOM05D001251 ORTHO05D004135 6.1e-161 571.6 542 63.3
Potri.014G106800 Populus trichocarpa HOM05D001251 ORTHO05D004135 2.0e-159 566.6 533 63.0
Haze_15754 Corylus avellana HOM05D001251 ORTHO05D004135 2.2e-158 563.1 539 62.7
Ciclev10018964m.g Citrus clementina HOM05D001251 ORTHO05D004135 1.4e-157 560.5 527 61.3
Potri.002G180800 Populus trichocarpa HOM05D001251 ORTHO05D004135 1.8e-157 560.1 536 62.5
Gohir.D12G121100 Gossypium hirsutum HOM05D001251 ORTHO05D004135 1.2e-156 557.4 536 62.7
Gorai.008G132000 Gossypium raimondii HOM05D001251 ORTHO05D004135 1.6e-156 557.0 533 63.2
Atru.chr5.788 Acer truncatum HOM05D001251 ORTHO05D004135 1.1e-154 550.8 531 62.7
Prupe.2G200400 Prunus persica HOM05D001251 ORTHO05D004135 1.5e-154 550.4 537 61.5
Manes.01G239000 Manihot esculenta HOM05D001251 ORTHO05D004135 9.5e-154 547.7 522 62.5
Cfa003724 Carpinus fangiana HOM05D001251 ORTHO05D004135 4.7e-153 545.4 538 61.9
Duzib133G0065 Durio zibethinus HOM05D001251 ORTHO05D004135 8.0e-153 544.7 537 61.5
Gohir.A12G117500 Gossypium hirsutum HOM05D001251 ORTHO05D004135 5.2e-152 542.0 536 61.4
Gorai.008G131800 Gossypium raimondii HOM05D001251 ORTHO05D004135 5.2e-152 542.0 534 61.8
Gohir.A11G101800 Gossypium hirsutum HOM05D001251 ORTHO05D004135 1.1e-149 534.3 528 60.4
Manes.05G015600 Manihot esculenta HOM05D001251 ORTHO05D004135 1.4e-149 533.9 529 59.9
Sabra14G0079000 Salix brachista HOM05D001251 ORTHO05D004135 1.7e-147 526.9 539 60.3
CiPaw.01G085700 Carya illinoinensis HOM05D001251 ORTHO05D004135 1.1e-146 524.2 542 60.1
Glyma.07G048500 Glycine max HOM05D001251 ORTHO05D004135 1.2e-143 514.2 529 61.1
Glyma.16G017400 Glycine max HOM05D001251 ORTHO05D004135 6.4e-142 508.4 530 60.8
TWI14G1269 Tripterygium wilfordii HOM05D001251 ORTHO05D004135 6.4e-142 508.4 549 57.7
Gohir.D11G106400 Gossypium hirsutum HOM05D001251 ORTHO05D004135 1.9e-141 506.9 531 58.2
Gorai.007G113900 Gossypium raimondii HOM05D001251 ORTHO05D004135 9.2e-141 504.6 531 58.0
COL.COLO4_23060 Corchorus olitorius HOM05D001251 ORTHO05D004135 3.9e-139 499.2 536 56.9
Sabra02G0133600 Salix brachista HOM05D001251 ORTHO05D004135 3.9e-139 499.2 544 58.3
CiPaw.02G045300 Carya illinoinensis HOM05D001251 ORTHO05D004135 2.3e-136 490.0 562 54.8
FvH4_7g17850 Fragaria vesca HOM05D001251 ORTHO05D004135 6.8e-136 488.4 551 57.5
RcHm_v2.0_Chr1g0361301 Rosa chinensis HOM05D001251 ORTHO05D004135 3.4e-135 486.1 548 56.8
FAN06G3608 Fragaria x ananassa HOM05D001251 ORTHO05D004135 5.8e-135 485.3 558 56.8
TWI23G1207 Tripterygium wilfordii HOM05D001251 ORTHO05D004135 7.6e-135 485.0 543 56.9
FAN06G1969 Fragaria x ananassa HOM05D001251 ORTHO05D004135 1.7e-134 483.8 548 57.3
Eucgr.D02651 Eucalyptus grandis HOM05D001251 ORTHO05D004135 2.2e-134 483.4 530 56.8
FAN01G0834 Fragaria x ananassa HOM05D001251 ORTHO05D004135 6.4e-134 481.9 549 57.6
FAN03G0514 Fragaria x ananassa HOM05D001251 ORTHO05D004135 1.4e-133 480.7 554 57.2
Gohir.D12G121000 Gossypium hirsutum HOM05D001251 ORTHO05D004135 3.2e-133 479.6 536 57.1
FAN10G0258 Fragaria x ananassa HOM05D001251 ORTHO05D004135 1.2e-132 477.6 549 57.6
TAR374G0209 Trochodendron aralioides HOM05D001251 ORTHO05D004135 1.2e-132 477.6 541 55.1
VMungo0331G1277 Vigna mungo HOM05D001251 ORTHO05D004135 2.1e-132 476.9 530 58.7
Gohir.A12G117400 Gossypium hirsutum HOM05D001251 ORTHO05D004135 2.7e-132 476.5 536 56.3
Ca_09556_v3 Cicer arietinum L. HOM05D001251 ORTHO05D004135 4.6e-132 475.7 533 57.2
arahy.Tifrunner.gnm1.ann1.0U0SSW Arachis hypogaea HOM05D001251 ORTHO05D004135 2.5e-130 469.9 540 55.7
FAN10G4260 Fragaria x ananassa HOM05D001251 ORTHO05D004135 9.6e-130 468.0 554 56.5
FAN01G1785 Fragaria x ananassa HOM05D001251 ORTHO05D004135 1.6e-129 467.2 549 56.6
TPR.G4678 Trifolium pratense HOM05D001251 ORTHO05D004135 6.2e-129 465.3 533 55.9
arahy.Tifrunner.gnm1.ann1.J7VJ5I Arachis hypogaea HOM05D001251 ORTHO05D004135 8.9e-128 461.5 540 54.6
MD01G1090900 Malus domestica HOM05D001251 ORTHO05D004135 1.5e-127 460.7 552 52.2
Glyma.03G261800 Glycine max HOM05D001251 ORTHO05D004135 7.6e-127 458.4 528 58.1
Glyma.19G260900 Glycine max HOM05D001251 ORTHO05D004135 1.1e-125 454.5 530 57.4
Medtr7g118330 Medicago truncatula HOM05D001251 ORTHO05D004135 1.2e-124 451.1 527 55.0
Nn1g00457 Nelumbo nucifera HOM05D001251 ORTHO05D004135 3.0e-123 446.4 538 55.2
Lj3g0020484 Lotus japonicus HOM05D001251 ORTHO05D004135 2.5e-122 443.4 529 54.8
Lalb_Chr10g0100921 Lupinus albus HOM05D001251 ORTHO05D004135 1.1e-120 438.0 532 54.9
Psat3g000720 Pisum sativum HOM05D001251 ORTHO05D004135 1.1e-120 438.0 529 55.2
Phvul.010G120401 Phaseolus vulgaris HOM05D001251 ORTHO05D004135 4.4e-119 432.6 529 55.6
TAR629G3201 Trochodendron aralioides HOM05D001251 ORTHO05D004135 7.1e-117 425.2 529 52.2
MSTRG.4794 Avicennia marina HOM05D001251 ORTHO05D004135 6.0e-116 422.2 550 52.5
arahy.Tifrunner.gnm1.ann1.P5534Y Arachis hypogaea HOM05D001251 ORTHO05D004135 1.7e-115 420.6 530 53.8
Phvul.009G259650 Phaseolus vulgaris HOM05D001251 ORTHO05D004135 1.9e-114 417.2 526 53.6
vmacro12634 Vaccinium macrocarpon HOM05D001251 ORTHO05D004135 2.5e-114 416.8 542 52.2
arahy.Tifrunner.gnm1.ann1.GF54Z4 Arachis hypogaea HOM05D001251 ORTHO05D004135 3.3e-114 416.4 530 53.4
Nitab4.5_0005359g0030 Nicotiana tabacum HOM05D001251 ORTHO05D004135 2.1e-113 413.7 541 51.4
Peaxi162Scf00092g01519 Petunia axillaris HOM05D001251 ORTHO05D004135 4.8e-113 412.5 570 50.2
Hma1.2p1_0074F.1_g038840 Hydrangea macrophylla HOM05D001251 ORTHO05D004135 6.2e-113 412.1 543 52.5
Dinv32652 Davidia involucrata HOM05D001251 ORTHO05D004135 9.0e-112 408.3 473 56.0
Oeu064410.3 Olea europaea HOM05D001251 ORTHO05D004135 1.3e-110 404.4 538 51.5
CAN.G1150.2 Capsicum annuum HOM05D001251 ORTHO05D004135 4.9e-110 402.5 542 51.5
MELO3C022302.2 Cucumis melo HOM05D001251 ORTHO05D004135 1.9e-109 400.6 541 49.2
Hma1.2p1_2492F.1_g323260 Hydrangea macrophylla HOM05D001251 ORTHO05D004135 2.4e-109 400.2 541 51.8
Lalb_Chr18g0044761 Lupinus albus HOM05D001251 ORTHO05D004135 3.2e-109 399.8 527 52.2
PGR031G0915 Punica granatum HOM05D001251 ORTHO05D004135 3.2e-109 399.8 542 48.9
ClCG06G002330 Citrullus lanatus HOM05D001251 ORTHO05D004135 4.2e-109 399.4 538 49.1
Lalb_Chr15g0076591 Lupinus albus HOM05D001251 ORTHO05D004135 5.4e-109 399.1 536 52.8
CSS0039199 Camellia sinensis var. sinensis HOM05D001251 ORTHO05D004135 7.1e-109 398.7 543 50.3
Solyc10g005080.3 Solanum lycopersicum HOM05D001251 ORTHO05D004135 1.6e-108 397.5 541 50.8
VMungo1309G2431 Vigna mungo HOM05D001251 ORTHO05D004135 6.0e-108 395.6 495 54.1
Cc02_g39990 Coffea canephora HOM05D001251 ORTHO05D004135 1.8e-107 394.0 539 51.0
Sopen10g001100 Solanum pennellii HOM05D001251 ORTHO05D004135 2.3e-107 393.7 543 51.0
Phvul.009G259400 Phaseolus vulgaris HOM05D001251 ORTHO05D004135 3.3e-106 389.8 528 51.5
AUR62004570 Chenopodium quinoa HOM05D001251 ORTHO05D004135 7.4e-106 388.7 540 50.2
Actinidia01529 Actinidia chinensis HOM05D001251 ORTHO05D004135 7.6e-103 378.6 518 50.8
Hund16759 Selenicereus undatus HOM05D001251 ORTHO05D004135 1.1e-101 374.8 520 50.4
AUR62022683 Chenopodium quinoa HOM05D001251 ORTHO05D004135 7.1e-101 372.1 540 49.6
SalBow5G5002 Salvia bowleyana HOM05D001251 ORTHO05D004135 2.3e-99 367.1 550 47.3
Sc26g0000440 Simmondsia chinensis HOM05D001251 ORTHO05D004135 2.3e-99 367.1 506 49.6
THA.LOC104803067 Tarenaya hassleriana HOM05D001251 ORTHO05D004135 5.1e-99 365.9 543 47.3
CsaV3_6G008360 Cucumis sativus L. HOM05D001251 ORTHO05D004135 4.3e-98 362.8 538 45.9
Sed0026128 Sechium edule HOM05D001251 ORTHO05D004135 8.2e-97 358.6 531 46.5
EL10Ac1g00171 Beta vulgaris HOM05D001251 ORTHO05D004135 9.0e-96 355.1 537 45.1
Aa31LG1G10420 Aethionema arabicum HOM05D001251 ORTHO05D004135 2.0e-95 354.0 539 46.9
THA.LOC104825910 Tarenaya hassleriana HOM05D001251 ORTHO05D004135 5.8e-95 352.4 545 46.4
Migut.N01518 Erythranthe guttata HOM05D001251 ORTHO05D004135 1.0e-94 351.7 546 47.6
MBI04_g18999_MAGBIO Magnolia biondii HOM05D001251 ORTHO05D004135 6.5e-94 349.0 550 46.4
Lj9C609G5 Lonicera japonica HOM05D001251 ORTHO05D004135 1.6e-92 344.4 549 49.5
MBI12_g27877_MAGBIO Magnolia biondii HOM05D001251 ORTHO05D004135 2.1e-92 344.0 505 48.9
THA.LOC104827645 Tarenaya hassleriana HOM05D001251 ORTHO05D004135 7.9e-92 342.0 537 46.6
Oeu034954.1 Olea europaea HOM05D001251 ORTHO05D004135 1.4e-88 331.3 532 46.2
Sed0027265 Sechium edule HOM05D001251 ORTHO05D004135 1.8e-88 330.9 541 43.4
Nitab4.5_0007792g0010 Nicotiana tabacum HOM05D001251 ORTHO05D004135 2.6e-87 327.0 539 44.9
PSO782G0772 Papaver somniferum HOM05D001251 ORTHO05D004135 3.8e-86 323.2 577 42.3
PSO063G2933 Papaver somniferum HOM05D001251 ORTHO05D004135 2.5e-85 320.5 578 42.6
ECA240G1436 Erigeron canadensis HOM05D001251 ORTHO05D004135 5.5e-85 319.3 536 44.0
Ah.05g178860 Amaranthus hybridus HOM05D001251 ORTHO05D004135 5.1e-83 312.8 503 45.5
DCAR_006991 Daucus carota HOM05D001251 ORTHO05D004135 6.3e-81 305.8 533 43.2
Actinidia28507 Actinidia chinensis HOM05D001251 ORTHO05D004135 2.4e-80 303.9 342 56.1
THA.LOC104815900 Tarenaya hassleriana HOM05D001251 ORTHO05D004135 1.0e-78 298.5 543 42.4
AT1G01060 Arabidopsis thaliana HOM05D001251 ORTHO05D004135 5.7e-74 282.7 544 41.5
unitig_45.g31541 Utricularia gibba HOM05D001251 ORTHO05D004135 6.3e-73 279.3 498 43.6
Carub.0001s0116 Capsella rubella HOM05D001251 ORTHO05D004135 1.2e-68 265.0 540 41.5
unitig_8.g3406 Utricularia gibba HOM05D001251 ORTHO05D004135 3.6e-68 263.5 503 42.7
Aqoxy7G00001_Aqoxy7G00002 Aquilegia oxysepala HOM05D001251 ORTHO05D004135 1.0e-67 261.9 485 41.6
Thhalv10007028m.g Eutrema salsugineum HOM05D001251 ORTHO05D004135 4.0e-67 260.0 542 40.8
BcaB03g13553 Brassica carinata HOM05D001071 ORTHO05D004135 1.1e-66 258.5 530 40.0
TAR375G0588 Trochodendron aralioides HOM05D000031 ORTHO05D009544 2.2e-65 254.2 305 51.8
HanXRQChr09g0264411 Helianthus annuus HOM05D001251 ORTHO05D004135 1.4e-64 251.5 506 41.7
HanXRQChr15g0489581 Helianthus annuus HOM05D001251 ORTHO05D004135 1.4e-64 251.5 526 41.8
Sp1g01250 Schrenkiella parvula HOM05D001251 ORTHO05D004135 4.1e-64 250.0 534 39.7
Hund27142 Selenicereus undatus HOM05D001251 ORTHO05D004135 3.5e-63 246.9 398 45.2
CARHR001420 Cardamine hirsuta HOM05D001251 ORTHO05D004135 7.7e-63 245.7 493 40.8
unitig_22.g6823 Utricularia gibba HOM05D001251 ORTHO05D004135 3.2e-61 240.4 471 43.1
AL1G11460 Arabidopsis lyrata HOM05D001251 ORTHO05D004135 4.2e-61 240.0 542 39.1
Aa31LG1G28200 Aethionema arabicum HOM05D001251 ORTHO05D004135 4.7e-60 236.5 453 41.7
A10p00850 Brassica napus HOM05D001251 ORTHO05D004135 2.0e-58 231.1 410 44.1
BolC5t28872H Brassica oleracea HOM05D001251 ORTHO05D004135 2.2e-57 227.6 422 43.1
BraA10t42363Z Brassica rapa HOM05D001251 ORTHO05D004135 2.2e-57 227.6 410 44.1
ATR0661G164 Amborella trichopoda HOM05D001251 ORTHO05D004135 3.7e-57 226.9 530 40.4
HanXRQChr09g0264401 Helianthus annuus HOM05D001251 ORTHO05D004135 2.4e-56 224.2 505 41.2
C05p00880 Brassica napus HOM05D001251 ORTHO05D004135 4.1e-56 223.4 423 42.6
SGA_v2.0_scaffold232G43523 Striga asiatica HOM05D001251 ORTHO05D004135 3.8e-54 216.9 510 38.0
Psat0s580g0080 Pisum sativum HOM05D001251 ORTHO05D004135 4.2e-53 213.4 179 69.3
Carub.0004s2954 Capsella rubella HOM05D001251 ORTHO05D004135 1.2e-52 211.8 535 40.0
unitig_8.g4997 Utricularia gibba HOM05D001251 ORTHO05D004135 3.4e-50 203.8 498 39.8
Os08g0157600 Oryza sativa ssp. japonica HOM05D001251 ORTHO05D004135 5.7e-50 203.0 432 41.9
BraA08t35670Z Brassica rapa HOM05D001251 ORTHO05D004135 9.8e-50 202.2 423 40.9
CDE04G0747 Ceratophyllum demersum HOM05D001251 ORTHO05D004135 2.2e-49 201.1 419 41.3
Zm00001eb172450 Zea mays HOM05D001251 ORTHO05D004135 6.3e-49 199.5 412 40.8
Lsat_1_v5_gn_3_140720 Lactuca sativa HOM05D001251 ORTHO05D004135 2.4e-48 197.6 572 35.5
C03p00110 Brassica napus HOM05D001251 ORTHO05D004135 1.6e-47 194.9 455 38.2
BcaB01g06139 Brassica carinata HOM05D001251 ORTHO05D004135 4.5e-47 193.4 450 37.8
BolC3t12576H Brassica oleracea HOM05D001251 ORTHO05D004135 4.5e-47 193.4 450 37.8
unitig_578.g16510 Utricularia gibba HOM05D001251 ORTHO05D004135 4.5e-47 193.4 401 40.1
A08p37730 Brassica napus HOM05D001251 ORTHO05D004135 1.0e-43 182.2 395 40.0
BolC7t40758H Brassica oleracea HOM05D001251 ORTHO05D004135 3.0e-43 180.6 538 35.5
AL4G46300 Arabidopsis lyrata HOM05D001251 ORTHO05D004135 1.9e-37 161.4 409 40.3
Sp4g28860 Schrenkiella parvula HOM05D001251 ORTHO05D004135 3.3e-37 160.6 421 39.4
AT2G46830 Arabidopsis thaliana HOM05D001251 ORTHO05D004135 2.1e-36 157.9 409 39.4
Prupe.2G200300 Prunus persica HOM05D001251 ORTHO05D004135 5.2e-35 153.3 197 54.3
BolC4t21764H Brassica oleracea HOM05D001071 ORTHO05D004135 2.9e-33 147.5 440 35.7
C04p01110 Brassica napus HOM05D001071 ORTHO05D004135 1.4e-32 145.2 442 35.5
CARHR142180 Cardamine hirsuta HOM05D001251 ORTHO05D004135 4.1e-32 143.7 459 38.1
Zm00001eb415760 Zea mays HOM05D001251 ORTHO05D004135 1.3e-30 138.7 215 49.3
HPP92_002735 Vanilla planifolia HOM05D001251 ORTHO05D004135 3.9e-30 137.1 466 32.6
A05p00970 Brassica napus HOM05D001071 ORTHO05D004135 4.3e-29 133.7 506 33.2
BraA05t19097Z Brassica rapa HOM05D001071 ORTHO05D004135 4.3e-29 133.7 525 32.6
Oeu032681.1 Olea europaea HOM05D001251 ORTHO05D004135 3.6e-28 130.6 180 43.3
C07p03620 Brassica napus HOM05D001251 ORTHO05D004135 4.7e-28 130.2 510 31.2
Aqoxy7G03772 Aquilegia oxysepala HOM05D001251 ORTHO05D004135 1.2e-26 125.6 233 40.3
BcaC06g36494 Brassica carinata HOM05D001251 ORTHO05D004135 4.4e-26 123.6 423 32.9
CDE12G0822 Ceratophyllum demersum HOM05D001251 ORTHO05D004135 9.2e-24 115.9 310 36.5
VMungo1383G3693 Vigna mungo HOM05D001251 ORTHO05D004135 2.1e-23 114.8 161 47.2
BcaC06g36496 Brassica carinata HOM05D001251 ORTHO05D004135 3.9e-22 110.5 250 41.6
BcaC07g37015 Brassica carinata HOM05D001251 ORTHO05D004135 3.3e-21 107.5 346 35.8
FAN02G3085 Fragaria x ananassa HOM05D001251 ORTHO05D004135 3.1e-19 100.9 116 55.2
FAN03G1652 Fragaria x ananassa HOM05D001251 ORTHO05D004135 3.1e-19 100.9 116 55.2
FAN17G2333 Fragaria x ananassa HOM05D001251 ORTHO05D004135 4.0e-19 100.5 115 54.8
C08p00060 Brassica napus HOM05D001251 ORTHO05D004135 9.9e-18 95.9 178 44.4
FAN24G2965 Fragaria x ananassa HOM05D001251 ORTHO05D004135 1.3e-17 95.5 115 53.0
HanXRQChr15g0489571 Helianthus annuus HOM05D001251 ORTHO05D004135 1.1e-16 92.4 514 27.6
SGA_v2.0_scaffold43G16339 Striga asiatica HOM05D000071 ORTHO05D000029 7.8e-15 86.3 205 36.1
HPP92_020838 Vanilla planifolia HOM05D001251 ORTHO05D004135 7.8e-15 86.3 323 33.1
C07p03630 Brassica napus HOM05D001251 ORTHO05D004135 1.7e-14 85.1 168 37.5
C08p00050 Brassica napus HOM05D001251 ORTHO05D004135 2.3e-14 84.7 175 36.6
BolC8t46805H Brassica oleracea HOM05D001251 ORTHO05D004135 2.3e-14 84.7 175 36.6
BcaC06g36495 Brassica carinata HOM05D001251 ORTHO05D004135 3.3e-13 80.9 222 32.9
FAN15G2528 Fragaria x ananassa HOM05D001251 ORTHO05D004135 2.1e-12 78.2 102 51.0
HPP92_020743 Vanilla planifolia HOM05D001251 ORTHO05D004135 2.1e-12 78.2 380 30.0
Oeu053268.1 Olea europaea HOM05D001251 ORTHO05D004135 3.6e-12 77.4 62 66.1
BcaC07g37009 Brassica carinata HOM05D001251 ORTHO05D004135 1.4e-11 75.5 175 34.3
BcaC02g12627 Brassica carinata HOM05D001071 ORTHO05D000932 8.9e-11 72.8 132 39.4
BcaC02g12626 Brassica carinata HOM05D001251 ORTHO05D004135 3.8e-09 67.4 288 32.3


User provided reference genes

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