Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc47.2 Carica papaya HOM05D001566 ORTHO05D001449 1.5e-116 422.9 219 100.0
Thecc.09G298200 Theobroma cacao HOM05D001566 ORTHO05D001449 4.1e-18 95.9 150 42.7
COL.COLO4_19201 Corchorus olitorius HOM05D001566 ORTHO05D001449 1.6e-17 94.0 232 37.9
Atru.chr3.3504 Acer truncatum HOM05D001566 ORTHO05D001449 5.9e-17 92.0 170 41.2
Manes.04G012700 Manihot esculenta HOM05D001566 ORTHO05D001449 1.0e-16 91.3 130 47.7
Haze_23697 Corylus avellana HOM05D001566 ORTHO05D001449 2.5e-15 86.7 200 36.0
TAR623G0211 Trochodendron aralioides HOM05D001566 ORTHO05D001449 3.2e-15 86.3 233 35.6
Dinv16228 Davidia involucrata HOM05D001566 ORTHO05D001449 5.5e-15 85.5 112 55.4
CSS0034287 Camellia sinensis var. sinensis HOM05D001566 ORTHO05D001449 1.6e-14 84.0 223 36.3
CSS0044551 Camellia sinensis var. sinensis HOM05D001566 ORTHO05D001449 1.6e-14 84.0 224 35.7
Potri.004G217100 Populus trichocarpa HOM05D001566 ORTHO05D001449 3.6e-14 82.8 222 33.8
Hma1.2p1_0051F.1_g029530 Hydrangea macrophylla HOM05D001566 ORTHO05D001449 4.7e-14 82.4 187 38.5
Cfa010281 Carpinus fangiana HOM05D001566 ORTHO05D001449 6.1e-14 82.0 219 36.5
Cc01_g10240 Coffea canephora HOM05D001566 ORTHO05D001449 8.0e-14 81.6 214 35.5
Oeu007730.1 Olea europaea HOM05D001566 ORTHO05D001449 8.0e-14 81.6 202 37.6
Duzib150G0550 Durio zibethinus HOM05D001566 ORTHO05D001449 1.0e-13 81.3 210 35.2
Duzib168G2014 Durio zibethinus HOM05D001566 ORTHO05D001449 1.0e-13 81.3 183 38.3
Rhsim13G0100800 Rhododendron simsii HOM05D001566 ORTHO05D001449 2.3e-13 80.1 197 36.0
Manes.11G152600 Manihot esculenta HOM05D001566 ORTHO05D001449 3.0e-13 79.7 196 35.2
CSS0012188 Camellia sinensis var. sinensis HOM05D001566 ORTHO05D001449 4.0e-13 79.3 153 43.8
MD03G1128200 Malus domestica HOM05D001566 ORTHO05D001449 5.2e-13 79.0 200 38.0
TAR369G0301 Trochodendron aralioides HOM05D001566 ORTHO05D001449 5.2e-13 79.0 177 38.4
Ciclev10029807m.g Citrus clementina HOM05D001566 ORTHO05D001449 8.8e-13 78.2 95 51.6
FAN16G1647 Fragaria x ananassa HOM05D001566 ORTHO05D001449 8.8e-13 78.2 223 33.2
Sabra04G0147800 Salix brachista HOM05D001566 ORTHO05D001449 8.8e-13 78.2 222 32.4
FAN25G2486 Fragaria x ananassa HOM05D001566 ORTHO05D001449 1.2e-12 77.8 214 35.0
Glyma.13G321800 Glycine max HOM05D001566 ORTHO05D001449 1.2e-12 77.8 238 32.4
Gohir.D05G087900 Gossypium hirsutum HOM05D001566 ORTHO05D001449 1.2e-12 77.8 223 31.4
QL01p014958 Quercus lobata HOM05D001566 ORTHO05D001449 1.2e-12 77.8 244 33.2
CiPaw.13G122200 Carya illinoinensis HOM05D001566 ORTHO05D001449 1.5e-12 77.4 168 39.3
FvH4_3g30580 Fragaria vesca HOM05D001566 ORTHO05D001449 1.5e-12 77.4 213 34.7
FAN11G3833 Fragaria x ananassa HOM05D001566 ORTHO05D001449 1.5e-12 77.4 213 34.7
Glyma.12G179000 Glycine max HOM05D001566 ORTHO05D001449 1.5e-12 77.4 131 40.5
Gohir.A05G086600 Gossypium hirsutum HOM05D001566 ORTHO05D001449 2.0e-12 77.0 152 38.8
PSO063G1941 Papaver somniferum HOM05D001566 ORTHO05D001449 2.0e-12 77.0 178 37.1
Nn6g35203 Nelumbo nucifera HOM05D001566 ORTHO05D001449 2.6e-12 76.6 183 37.7
Actinidia25404 Actinidia chinensis HOM05D001566 ORTHO05D001449 3.4e-12 76.3 188 37.8
Duzib170G0062 Durio zibethinus HOM05D001566 ORTHO05D001449 3.4e-12 76.3 179 37.4
PGR102G3029 Punica granatum HOM05D001566 ORTHO05D001449 3.4e-12 76.3 198 33.8
Actinidia24150 Actinidia chinensis HOM05D001566 ORTHO05D001449 4.4e-12 75.9 191 37.2
Peaxi162Scf00983g00008 Petunia axillaris HOM05D001566 ORTHO05D001449 9.8e-12 74.7 180 35.0
TWI79G1213 Tripterygium wilfordii HOM05D001566 ORTHO05D001449 1.7e-11 73.9 191 38.7
TWI79G0946 Tripterygium wilfordii HOM05D001566 ORTHO05D001449 3.7e-11 72.8 191 38.2
Gorai.009G090000 Gossypium raimondii HOM05D001566 ORTHO05D001449 4.9e-11 72.4 223 30.5
Actinidia07188 Actinidia chinensis HOM05D001566 ORTHO05D001449 6.3e-11 72.0 192 35.9
MBI17_g12287_MAGBIO Magnolia biondii HOM05D001566 ORTHO05D001449 6.3e-11 72.0 109 41.3
Dinv29383 Davidia involucrata HOM05D001566 ORTHO05D001449 8.3e-11 71.6 144 41.0
GSVIVG01031459001 Vitis vinifera HOM05D001566 ORTHO05D001449 1.4e-10 70.9 210 32.9
Ciclev10029984m.g Citrus clementina HOM05D001566 ORTHO05D001449 4.1e-10 69.3 214 33.6
Migut.N02542 Erythranthe guttata HOM05D001566 ORTHO05D001449 4.1e-10 69.3 94 48.9
Phvul.005G130100 Phaseolus vulgaris HOM05D001566 ORTHO05D001449 4.1e-10 69.3 186 33.3
AUR62029145 Chenopodium quinoa HOM05D001566 ORTHO05D001449 5.4e-10 68.9 139 38.8
MD11G1149000 Malus domestica HOM05D001566 ORTHO05D001449 7.0e-10 68.6 216 36.1
CsaV3_1G014080 Cucumis sativus L. HOM05D001566 ORTHO05D001449 9.2e-10 68.2 156 36.5
FAN21G0361 Fragaria x ananassa HOM05D001566 ORTHO05D001449 9.2e-10 68.2 216 33.8
Aqoxy1G01071 Aquilegia oxysepala HOM05D001566 ORTHO05D001449 1.2e-09 67.8 122 37.7
Oeu007310.1 Olea europaea HOM05D001566 ORTHO05D001449 2.0e-09 67.0 197 33.0
Rhsim01G0210300 Rhododendron simsii HOM05D001566 ORTHO05D001449 2.0e-09 67.0 98 48.0
MBI17_g42347_MAGBIO Magnolia biondii HOM05D001566 ORTHO05D001449 2.7e-09 66.6 112 42.0
Solyc11g066420.1 Solanum lycopersicum HOM05D001566 ORTHO05D001449 3.5e-09 66.2 188 33.0
Glyma.11G192400 Glycine max HOM05D001566 ORTHO05D001449 5.9e-09 65.5 196 34.7
Lj3g0004908 Lotus japonicus HOM05D001566 ORTHO05D001449 5.9e-09 65.5 182 33.5
MELO3C004869.2 Cucumis melo HOM05D001566 ORTHO05D001449 7.8e-09 65.1 158 38.6
MSTRG.21085 Avicennia marina HOM05D001566 ORTHO05D001449 1.0e-08 64.7 119 41.2
PSO339G0270 Papaver somniferum HOM05D001566 ORTHO05D001449 1.0e-08 64.7 195 34.4
CiPaw.14G088700 Carya illinoinensis HOM05D001566 ORTHO05D001449 1.3e-08 64.3 105 46.7
vmacro14385 Vaccinium macrocarpon HOM05D001566 ORTHO05D001449 1.3e-08 64.3 114 43.0
arahy.Tifrunner.gnm1.ann1.JJEK9U Arachis hypogaea HOM05D001566 ORTHO05D001449 2.3e-08 63.5 70 48.6
arahy.Tifrunner.gnm1.ann1.PI0SH3 Arachis hypogaea HOM05D001566 ORTHO05D001449 2.3e-08 63.5 70 48.6
TPR.G21037 Trifolium pratense HOM05D001566 ORTHO05D001449 2.3e-08 63.5 94 40.4
Glyma.12G081700 Glycine max HOM05D001566 ORTHO05D001449 2.9e-08 63.2 220 30.9
AT5G22890 Arabidopsis thaliana HOM05D001566 ORTHO05D001449 3.8e-08 62.8 209 28.7
Lalb_Chr22g0350431 Lupinus albus HOM05D001566 ORTHO05D001449 5.0e-08 62.4 215 33.0
VMungo1127G1571 Vigna mungo HOM05D001566 ORTHO05D001449 5.0e-08 62.4 194 36.1
Ca_01704_v3 Cicer arietinum L. HOM05D001566 ORTHO05D001449 1.5e-07 60.8 168 30.4
EL10Ac9g22636 Beta vulgaris HOM05D001566 ORTHO05D001449 1.9e-07 60.5 139 35.3
Carub.0006s2067 Capsella rubella HOM05D001566 ORTHO05D001449 1.9e-07 60.5 199 32.2
ClCG01G013810 Citrullus lanatus HOM05D001566 ORTHO05D001449 1.9e-07 60.5 95 42.1
Sp6g22510 Schrenkiella parvula HOM05D001566 ORTHO05D001449 1.9e-07 60.5 147 35.4
Sopen11g026170 Solanum pennellii HOM05D001566 ORTHO05D001449 2.5e-07 60.1 190 31.1
unitig_699.g19447 Utricularia gibba HOM05D001566 ORTHO05D001449 2.5e-07 60.1 186 32.8
ECA233G5318 Erigeron canadensis HOM05D001566 ORTHO05D001449 3.3e-07 59.7 114 38.6
BraA02t05698Z Brassica rapa HOM05D001566 ORTHO05D001449 4.3e-07 59.3 186 31.2
Phvul.011G086600 Phaseolus vulgaris HOM05D001566 ORTHO05D001449 5.6e-07 58.9 177 35.0
Sed0012362 Sechium edule HOM05D001566 ORTHO05D001449 5.6e-07 58.9 138 36.2
Sc04g0000470 Simmondsia chinensis HOM05D001566 ORTHO05D001449 5.6e-07 58.9 129 40.3
AL6G34030 Arabidopsis lyrata HOM05D001566 ORTHO05D001449 7.3e-07 58.5 198 30.8
BNapus_Darmor_BZH_scaffold_38p00260 Brassica napus HOM05D001566 ORTHO05D001449 7.3e-07 58.5 108 38.9
AUR62029146 Chenopodium quinoa HOM05D001566 ORTHO05D001449 7.3e-07 58.5 152 29.6
C02p11380 Brassica napus HOM05D001566 ORTHO05D001449 9.5e-07 58.2 186 32.3
Gohir.A09G088500 Gossypium hirsutum HOM05D001566 ORTHO05D001449 9.5e-07 58.2 196 34.2
BcaC03g13928 Brassica carinata HOM05D001566 ORTHO05D001449 1.2e-06 57.8 186 32.3
BcaC04g19608 Brassica carinata HOM05D001566 ORTHO05D001449 1.2e-06 57.8 180 28.9
Gohir.D09G088200 Gossypium hirsutum HOM05D001566 ORTHO05D001449 1.2e-06 57.8 196 33.7
HanXRQChr13g0396181 Helianthus annuus HOM05D001566 ORTHO05D001449 1.2e-06 57.8 108 38.0
unitig_27.g25113 Utricularia gibba HOM05D001566 ORTHO05D001449 2.1e-06 57.0 130 33.8
Medtr2g084360 Medicago truncatula HOM05D001566 ORTHO05D001449 3.6e-06 56.2 78 42.3
RcHm_v2.0_Chr5g0056621 Rosa chinensis HOM05D001566 ORTHO05D001449 4.7e-06 55.8 229 29.3
CARHR190640 Cardamine hirsuta HOM05D001566 ORTHO05D001449 6.1e-06 55.5 164 31.1
Gorai.006G104700 Gossypium raimondii HOM05D001566 ORTHO05D001449 6.1e-06 55.5 196 33.7


User provided reference genes

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