Gene: Sopen11g026170

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g026170
  • Transcript Identifier Sopen11g026170.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 61913742-61914899 : positive

Gene Family Information

  • ID HOM05D001566
  • #Genes/#Species 408/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g026170.1

Descriptions

  • Description C2H2 and C2HC zinc fingers superfamily protein | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: response to chitin, regulation of transcription | LOCATED IN: intracellular | EXPRESSED IN: root | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type | BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010044
IEA
InterProresponse to aluminum ion
GO:0010447
IEA
InterProresponse to acidic pH
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G22890
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT5G22890

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT5G22890
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G22890

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G22890

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013087 Zinc finger C2H2-type
IPR044300 Protein SENSITIVE TO PROTON RHIZOTOXICITY 1/2
IPR036236 Zinc finger C2H2 superfamily
Mapman id Description
15.5.15 RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF)