Gene: COL.COLO4_19201

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_19201
  • Transcript Identifier COL.rna17964
  • Gene Type Coding gene
  • Location AWUE01016556.1 : 10652-11920 : positive

Gene Family Information

  • ID HOM05D001566
  • #Genes/#Species 408/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna17964
  • GenBank OMO90380.1
  • id gene19173
  • gene_name COLO4_19201
  • uniprot A0A1R3J6F4

Descriptions

  • Description Zinc finger, C2H2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010044
IEA
GOA Databaseresponse to aluminum ion
GO:0010044
IEA
InterProresponse to aluminum ion
GO:0010447
IEA
GOA Databaseresponse to acidic pH
GO:0010447
IEA
InterProresponse to acidic pH
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G22890
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT5G22890

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT5G22890
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G22890

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G22890

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036236 Zinc finger C2H2 superfamily
IPR013087 Zinc finger C2H2-type
IPR044300 Protein SENSITIVE TO PROTON RHIZOTOXICITY 1/2
Mapman id Description
15.5.15 RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF)