Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc42.179 Carica papaya HOM05D002009 ORTHO05D005728 9.3e-77 290.0 137 100.0
Manes.12G077400 Manihot esculenta HOM05D002009 ORTHO05D005728 8.2e-41 170.6 83 92.8
Eucgr.I00173 Eucalyptus grandis HOM05D002009 ORTHO05D005728 1.1e-40 170.2 83 92.8
COL.COLO4_09630 Corchorus olitorius HOM05D002009 ORTHO05D005728 1.4e-40 169.9 83 94.0
Thecc.07G044100 Theobroma cacao HOM05D002009 ORTHO05D005728 3.1e-40 168.7 83 92.8
CDE06G1389 Ceratophyllum demersum HOM05D002009 ORTHO05D005728 6.9e-40 167.5 82 93.9
HanXRQChr12g0380541 Helianthus annuus HOM05D002009 ORTHO05D005728 6.9e-40 167.5 83 91.6
Gohir.A13G139100 Gossypium hirsutum HOM05D002009 ORTHO05D005728 9.1e-40 167.2 83 91.6
Gohir.D13G143900 Gossypium hirsutum HOM05D002009 ORTHO05D005728 9.1e-40 167.2 83 91.6
Gorai.013G160900 Gossypium raimondii HOM05D002009 ORTHO05D005728 9.1e-40 167.2 83 91.6
Actinidia06606 Actinidia chinensis HOM05D002009 ORTHO05D005728 1.5e-39 166.4 83 90.4
ECA233G2868 Erigeron canadensis HOM05D002009 ORTHO05D005728 2.0e-39 166.0 83 89.2
DCAR_001198 Daucus carota HOM05D002009 ORTHO05D005728 2.6e-39 165.6 83 89.2
Prupe.4G273600 Prunus persica HOM05D002009 ORTHO05D005728 2.6e-39 165.6 83 90.4
TWI31G0245 Tripterygium wilfordii HOM05D002009 ORTHO05D005728 3.4e-39 165.2 83 88.0
MBI03_g39989_MAGBIO Magnolia biondii HOM05D002009 ORTHO05D005728 4.5e-39 164.9 82 90.2
Psat5g060760 Pisum sativum HOM05D002009 ORTHO05D005728 5.9e-39 164.5 83 88.0
THA.LOC104818425 Tarenaya hassleriana HOM05D002009 ORTHO05D005728 5.9e-39 164.5 77 96.1
GSVIVG01026455001 Vitis vinifera HOM05D002009 ORTHO05D005728 5.9e-39 164.5 83 89.2
MSTRG.23471 Avicennia marina HOM05D002009 ORTHO05D005728 1.0e-38 163.7 83 86.7
Glyma.04G210700 Glycine max HOM05D002009 ORTHO05D005728 1.0e-38 163.7 83 89.2
Lj2C610T3 Lonicera japonica HOM05D002009 ORTHO05D005728 1.0e-38 163.7 83 88.0
Ah.06g190900 Amaranthus hybridus HOM05D002009 ORTHO05D005728 1.7e-38 162.9 83 88.0
Migut.H00864 Erythranthe guttata HOM05D002009 ORTHO05D005728 1.7e-38 162.9 83 86.7
Rhsim10G0131800 Rhododendron simsii HOM05D002009 ORTHO05D005728 1.7e-38 162.9 83 88.0
SHI11497 Sapria himalayana HOM05D002009 ORTHO05D005728 1.7e-38 162.9 83 90.4
Cc07_g18900 Coffea canephora HOM05D002009 ORTHO05D005728 2.2e-38 162.5 83 88.0
RcHm_v2.0_Chr2g0122111 Rosa chinensis HOM05D002009 ORTHO05D005728 2.2e-38 162.5 83 88.0
PSO170G4442 Papaver somniferum HOM05D002009 ORTHO05D005728 2.9e-38 162.2 82 89.0
Potri.005G065800 Populus trichocarpa HOM05D002009 ORTHO05D005728 3.8e-38 161.8 83 86.7
CANSAT01G2904 Cannabis sativa HOM05D002009 ORTHO05D005728 5.0e-38 161.4 82 87.8
FvH4_1g24660 Fragaria vesca HOM05D002009 ORTHO05D005728 5.0e-38 161.4 83 86.7
FAN19G2450 Fragaria x ananassa HOM05D002009 ORTHO05D005728 5.0e-38 161.4 83 86.7
FAN23G2639 Fragaria x ananassa HOM05D002009 ORTHO05D005728 5.0e-38 161.4 83 86.7
FAN26G3211 Fragaria x ananassa HOM05D002009 ORTHO05D005728 5.0e-38 161.4 83 86.7
FAN28G0184 Fragaria x ananassa HOM05D002009 ORTHO05D005728 5.0e-38 161.4 83 86.7
Nn033s41620 Nelumbo nucifera HOM05D002009 ORTHO05D005728 5.0e-38 161.4 82 90.2
Nn5g28479 Nelumbo nucifera HOM05D002009 ORTHO05D005728 5.0e-38 161.4 82 90.2
Ca_16976_v3 Cicer arietinum L. HOM05D002009 ORTHO05D005728 6.5e-38 161.0 83 85.5
MD00G1053300 Malus domestica HOM05D002009 ORTHO05D005728 6.5e-38 161.0 83 86.7
arahy.Tifrunner.gnm1.ann1.7D624Q Arachis hypogaea HOM05D002009 ORTHO05D005728 8.5e-38 160.6 83 86.7
Lj1g0002975 Lotus japonicus HOM05D002009 ORTHO05D005728 8.5e-38 160.6 83 85.5
Lalb_Chr23g0272641 Lupinus albus HOM05D002009 ORTHO05D005728 1.1e-37 160.2 79 91.1
CiPaw.03G119300 Carya illinoinensis HOM05D002009 ORTHO05D005728 1.4e-37 159.8 83 86.7
PSO017G4864 Papaver somniferum HOM05D002009 ORTHO05D005728 1.4e-37 159.8 82 87.8
Cfa002919 Carpinus fangiana HOM05D002009 ORTHO05D005728 1.9e-37 159.5 83 86.7
Ciclev10000086m.g Citrus clementina HOM05D002009 ORTHO05D005728 1.9e-37 159.5 83 90.4
Solyc10g081250.3 Solanum lycopersicum HOM05D002009 ORTHO05D005728 1.9e-37 159.5 83 83.1
Sopen10g031750 Solanum pennellii HOM05D002009 ORTHO05D005728 1.9e-37 159.5 83 83.1
Duzib268G1329 Durio zibethinus HOM05D002009 ORTHO05D005728 2.5e-37 159.1 83 90.4
Glyma.06G155300 Glycine max HOM05D002009 ORTHO05D005728 2.5e-37 159.1 77 93.5
MD07G1029900 Malus domestica HOM05D002009 ORTHO05D005728 2.5e-37 159.1 83 85.5
EL10Ac4g09604 Beta vulgaris HOM05D002009 ORTHO05D005728 3.2e-37 158.7 83 85.5
CAN.G128.115 Capsicum annuum HOM05D002009 ORTHO05D005728 3.2e-37 158.7 83 81.9
SGA_v2.0_scaffold273G46462 Striga asiatica HOM05D002009 ORTHO05D005728 3.2e-37 158.7 83 84.3
TAR376G0128 Trochodendron aralioides HOM05D002009 ORTHO05D005728 3.2e-37 158.7 82 87.8
Haze_25289 Corylus avellana HOM05D002009 ORTHO05D005728 4.2e-37 158.3 87 85.1
MELO3C024596.2 Cucumis melo HOM05D002009 ORTHO05D005728 4.2e-37 158.3 83 83.1
Lsat_1_v5_gn_5_68921 Lactuca sativa HOM05D002009 ORTHO05D005728 4.2e-37 158.3 83 85.5
QL10p042354 Quercus lobata HOM05D002009 ORTHO05D005728 4.2e-37 158.3 83 86.7
Phvul.009G155200 Phaseolus vulgaris HOM05D002009 ORTHO05D005728 5.5e-37 157.9 77 90.9
AUR62006845 Chenopodium quinoa HOM05D002009 ORTHO05D005728 7.2e-37 157.5 83 84.3
Zm00001eb201340 Zea mays HOM05D002009 ORTHO05D005728 7.2e-37 157.5 83 84.3
HPP92_005659 Vanilla planifolia HOM05D002009 ORTHO05D005728 9.4e-37 157.1 84 83.3
Peaxi162Scf00153g00816 Petunia axillaris HOM05D002009 ORTHO05D005728 1.2e-36 156.8 83 81.9
TPR.G28192 Trifolium pratense HOM05D002009 ORTHO05D005728 1.2e-36 156.8 83 83.1
Aqoxy5G02298 Aquilegia oxysepala HOM05D002009 ORTHO05D005728 1.6e-36 156.4 82 84.1
Medtr3g096525 Medicago truncatula HOM05D002009 ORTHO05D005728 6.1e-36 154.5 83 83.1
Os11g0186400 Oryza sativa ssp. japonica HOM05D002009 ORTHO05D005728 7.9e-36 154.1 83 83.1
Sed0004291 Sechium edule HOM05D002009 ORTHO05D005728 1.4e-35 153.3 83 79.5
Migut.E01506 Erythranthe guttata HOM05D002009 ORTHO05D005728 2.3e-35 152.5 83 79.5
Aa31LG1G17940 Aethionema arabicum HOM05D002009 ORTHO05D005728 3.9e-35 151.8 86 80.2
BraA06t26010Z Brassica rapa HOM05D002009 ORTHO05D005728 5.1e-35 151.4 82 82.9
A06p30580 Brassica napus HOM05D002009 ORTHO05D005728 8.8e-35 150.6 77 87.0
C03p62380 Brassica napus HOM05D002009 ORTHO05D005728 8.8e-35 150.6 77 87.0
BolC3t18498H Brassica oleracea HOM05D002009 ORTHO05D005728 8.8e-35 150.6 77 87.0
VMungo1309G0642 Vigna mungo HOM05D002009 ORTHO05D005728 1.1e-34 150.2 77 85.7
Atru.chr4.962 Acer truncatum HOM05D002009 ORTHO05D005728 1.5e-34 149.8 77 85.7
Sp2g27020 Schrenkiella parvula HOM05D002009 ORTHO05D005728 2.0e-34 149.4 86 77.9
CARHR277870 Cardamine hirsuta HOM05D002009 ORTHO05D005728 2.6e-34 149.1 86 77.9
Thhalv10003565m.g Eutrema salsugineum HOM05D002009 ORTHO05D005728 2.6e-34 149.1 86 77.9
Phvul.005G019000 Phaseolus vulgaris HOM05D002009 ORTHO05D005728 2.6e-34 149.1 77 87.0
AL8G41220 Arabidopsis lyrata HOM05D002009 ORTHO05D005728 5.7e-34 147.9 86 76.7
AT5G63960 Arabidopsis thaliana HOM05D002009 ORTHO05D005728 5.7e-34 147.9 86 76.7
ATR0584G016 Amborella trichopoda HOM05D002009 ORTHO05D005728 7.4e-34 147.5 82 79.3
Mapoly0087s0021 Marchantia polymorpha HOM05D002009 ORTHO05D005728 3.7e-33 145.2 82 79.3
Carub.0008s2474 Capsella rubella HOM05D002009 ORTHO05D005728 4.8e-33 144.8 86 74.4
Migut.B00967 Erythranthe guttata HOM05D002009 ORTHO05D005728 1.4e-32 143.3 87 74.7
Nitab4.5_0003690g0060 Nicotiana tabacum HOM05D002009 ORTHO05D005728 2.4e-32 142.5 118 59.3
Aa31LG3G3040 Aethionema arabicum HOM05D002009 ORTHO05D005728 3.1e-32 142.1 77 80.5
AUR62000499 Chenopodium quinoa HOM05D002009 ORTHO05D005728 4.1e-32 141.7 94 72.3
Pp3c27_3350 Physcomitrium patens HOM05D002009 ORTHO05D005728 4.1e-32 141.7 83 74.7
Pp3c6_19160 Physcomitrium patens HOM05D002009 ORTHO05D005728 9.1e-32 140.6 83 73.5
SMO232G0005 Selaginella moellendorffii HOM05D002009 ORTHO05D005728 1.0e-30 137.1 83 72.3
CBR_g38906 Chara braunii HOM05D002009 ORTHO05D005728 2.9e-30 135.6 82 73.2
Cre01.g015250 Chlamydomonas reinhardtii HOM05D002009 ORTHO05D005728 1.7e-25 119.8 82 64.6
Sabra05G0054400 Salix brachista HOM05D002009 ORTHO05D005728 6.3e-25 117.9 57 89.5
Dinv34360 Davidia involucrata HOM05D002009 ORTHO05D005728 1.6e-23 113.2 55 89.1
MCO05G447 Micromonas commoda HOM05D002009 ORTHO05D005728 6.5e-22 107.8 76 61.8
CsaV3_6G041210 Cucumis sativus L. HOM05D002009 ORTHO05D005728 2.5e-21 105.9 61 73.8
PRCOL_00002177 Prasinoderma coloniale HOM05D002009 ORTHO05D005728 1.2e-20 103.6 79 55.7
Cfa025827 Carpinus fangiana HOM05D002009 ORTHO05D005728 2.7e-20 102.4 76 55.3
CSS0020764 Camellia sinensis var. sinensis HOM05D002009 ORTHO05D005728 1.5e-18 96.7 84 59.5
Haze_26645 Corylus avellana HOM05D002009 ORTHO05D005728 7.5e-18 94.4 77 48.1
arahy.Tifrunner.gnm1.ann1.BG9WT0 Arachis hypogaea HOM05D002009 ORTHO05D005728 8.5e-14 80.9 116 42.2
CSS0020069 Camellia sinensis var. sinensis HOM05D002009 ORTHO05D005728 1.0e-06 57.4 34 73.5


User provided reference genes

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