Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc365.1 Carica papaya HOM05D004885 ORTHO05D006124 1.1e-133 479.9 246 100.0
Atru.chr4.1890 Acer truncatum HOM05D004885 ORTHO05D006124 6.8e-78 294.7 245 60.4
Atru.chr3.136 Acer truncatum HOM05D004885 ORTHO05D006124 2.0e-77 293.1 249 61.4
Glyma.01G159000 Glycine max HOM05D004885 ORTHO05D006124 9.8e-77 290.8 249 58.6
Haze_00453 Corylus avellana HOM05D004885 ORTHO05D006124 1.7e-76 290.0 247 59.1
Ciclev10025327m.g Citrus clementina HOM05D004885 ORTHO05D006124 8.3e-76 287.7 245 59.6
Dinv40183 Davidia involucrata HOM05D004885 ORTHO05D006124 2.4e-75 286.2 245 57.1
Dinv08168 Davidia involucrata HOM05D004885 ORTHO05D006124 3.1e-75 285.8 246 57.3
Sabra05G0033700 Salix brachista HOM05D004885 ORTHO05D006124 9.1e-75 284.3 276 54.3
Lj4C235G2 Lonicera japonica HOM05D004885 ORTHO05D006124 2.0e-74 283.1 254 58.3
GSVIVG01026648001 Vitis vinifera HOM05D004885 ORTHO05D006124 4.5e-74 282.0 247 56.7
Thecc.01G005900 Theobroma cacao HOM05D004885 ORTHO05D006124 1.0e-73 280.8 266 54.5
MD15G1232400 Malus domestica HOM05D004885 ORTHO05D006124 1.7e-73 280.0 256 58.2
CiPaw.06G030500 Carya illinoinensis HOM05D004885 ORTHO05D006124 2.9e-73 279.3 241 56.8
COL.COLO4_10588 Corchorus olitorius HOM05D004885 ORTHO05D006124 8.5e-73 277.7 266 53.0
Gohir.A07G170900 Gossypium hirsutum HOM05D004885 ORTHO05D006124 8.5e-73 277.7 266 55.6
VMungo1215G0823 Vigna mungo HOM05D004885 ORTHO05D006124 1.5e-72 276.9 249 57.8
QL04p013021 Quercus lobata HOM05D004885 ORTHO05D006124 1.9e-72 276.6 246 56.9
Gohir.D07G177700 Gossypium hirsutum HOM05D004885 ORTHO05D006124 2.5e-72 276.2 266 55.3
Gorai.001G198800 Gossypium raimondii HOM05D004885 ORTHO05D006124 2.5e-72 276.2 266 55.3
Glyma.11G085700 Glycine max HOM05D004885 ORTHO05D006124 7.2e-72 274.6 249 55.8
Duzib147G0190 Durio zibethinus HOM05D004885 ORTHO05D006124 3.6e-71 272.3 266 54.5
CANSAT80G0225 Cannabis sativa HOM05D004885 ORTHO05D006124 4.0e-70 268.9 238 56.7
MD02G1117700 Malus domestica HOM05D004885 ORTHO05D006124 4.0e-70 268.9 254 55.9
Phvul.002G116400 Phaseolus vulgaris HOM05D004885 ORTHO05D006124 1.2e-69 267.3 249 56.2
Ca_24977_v3 Cicer arietinum L. HOM05D004885 ORTHO05D006124 2.0e-69 266.5 244 54.5
TWI09G0982 Tripterygium wilfordii HOM05D004885 ORTHO05D006124 3.4e-69 265.8 249 54.2
Hma1.2p1_0300F.1_g118050 Hydrangea macrophylla HOM05D004885 ORTHO05D006124 2.8e-68 262.7 235 57.9
Medtr5g024150 Medicago truncatula HOM05D004885 ORTHO05D006124 2.8e-68 262.7 237 55.7
TWI53G2056 Tripterygium wilfordii HOM05D004885 ORTHO05D006124 3.7e-68 262.3 249 53.8
AL3G17570 Arabidopsis lyrata HOM05D004885 ORTHO05D006124 4.9e-68 261.9 248 54.0
Lj2g0026862 Lotus japonicus HOM05D004885 ORTHO05D006124 4.9e-68 261.9 245 54.3
Eucgr.I02226 Eucalyptus grandis HOM05D004885 ORTHO05D006124 6.3e-68 261.5 249 55.0
Actinidia22902 Actinidia chinensis HOM05D004885 ORTHO05D006124 1.1e-67 260.8 236 56.4
arahy.Tifrunner.gnm1.ann1.E2QT4D Arachis hypogaea HOM05D004885 ORTHO05D006124 1.1e-67 260.8 247 53.0
arahy.Tifrunner.gnm1.ann1.P2H8QY Arachis hypogaea HOM05D004885 ORTHO05D006124 1.1e-67 260.8 247 53.0
Hma1.2p1_0085F.1_g044730 Hydrangea macrophylla HOM05D004885 ORTHO05D006124 2.4e-67 259.6 242 55.8
Prupe.7G181700 Prunus persica HOM05D004885 ORTHO05D006124 5.4e-67 258.5 257 55.6
AT3G06540 Arabidopsis thaliana HOM05D004885 ORTHO05D006124 1.2e-66 257.3 245 54.3
CSS0037388 Camellia sinensis var. sinensis HOM05D004885 ORTHO05D006124 1.2e-66 257.3 231 54.5
RcHm_v2.0_Chr2g0097311 Rosa chinensis HOM05D004885 ORTHO05D006124 2.0e-66 256.5 252 55.2
FvH4_1g10450 Fragaria vesca HOM05D004885 ORTHO05D006124 7.7e-66 254.6 243 54.3
Manes.01G155100 Manihot esculenta HOM05D004885 ORTHO05D006124 7.7e-66 254.6 246 54.5
Lalb_Chr09g0324741 Lupinus albus HOM05D004885 ORTHO05D006124 2.9e-65 252.7 249 50.2
FAN26G3465 Fragaria x ananassa HOM05D004885 ORTHO05D006124 3.8e-65 252.3 241 54.8
Carub.0003s0600 Capsella rubella HOM05D004885 ORTHO05D006124 8.6e-65 251.1 243 52.7
FAN28G2162 Fragaria x ananassa HOM05D004885 ORTHO05D006124 3.3e-64 249.2 248 53.2
Thhalv10020408m.g Eutrema salsugineum HOM05D004885 ORTHO05D006124 5.6e-64 248.4 241 52.7
Aa31LG5G17090 Aethionema arabicum HOM05D004885 ORTHO05D006124 1.2e-63 247.3 243 54.7
THA.LOC104823506 Tarenaya hassleriana HOM05D004885 ORTHO05D006124 1.2e-63 247.3 244 52.5
CSS0014238 Camellia sinensis var. sinensis HOM05D004885 ORTHO05D006124 3.6e-63 245.7 239 52.3
BraA01t04432Z Brassica rapa HOM05D001895 ORTHO05D002082 4.7e-63 245.4 242 53.3
A05p41490 Brassica napus HOM05D001895 ORTHO05D002082 8.0e-63 244.6 249 50.2
Sp3g05480 Schrenkiella parvula HOM05D004885 ORTHO05D006124 8.0e-63 244.6 243 51.4
PGR102G0956 Punica granatum HOM05D004885 ORTHO05D006124 1.0e-62 244.2 228 52.2
DCAR_006252 Daucus carota HOM05D004885 ORTHO05D006124 2.3e-62 243.0 246 50.0
BraA05t22870Z Brassica rapa HOM05D004885 ORTHO05D006124 3.0e-62 242.7 251 50.2
CsaV3_3G000260 Cucumis sativus L. HOM05D004885 ORTHO05D006124 3.0e-62 242.7 239 52.7
BolC5t34729H Brassica oleracea HOM05D004885 ORTHO05D006124 6.8e-62 241.5 249 50.6
MBI15_g00077_MAGBIO Magnolia biondii HOM05D004885 ORTHO05D006124 6.8e-62 241.5 239 50.6
C05p60690 Brassica napus HOM05D001895 ORTHO05D002082 8.9e-62 241.1 249 50.6
EL10Ac8g19196 Beta vulgaris HOM05D004885 ORTHO05D006124 5.7e-61 238.4 254 51.2
Hund03605 Selenicereus undatus HOM05D004885 ORTHO05D006124 5.7e-61 238.4 249 49.8
AUR62029056 Chenopodium quinoa HOM05D004885 ORTHO05D006124 1.3e-60 237.3 250 50.4
Nn4g22671 Nelumbo nucifera HOM05D004885 ORTHO05D006124 4.9e-60 235.3 241 51.5
Cc07_g11780 Coffea canephora HOM05D004885 ORTHO05D006124 6.4e-60 235.0 258 49.6
Migut.C00024 Erythranthe guttata HOM05D004885 ORTHO05D006124 3.2e-59 232.6 247 47.0
ECA238G4274 Erigeron canadensis HOM05D004885 ORTHO05D006124 4.1e-59 232.3 241 48.5
AUR62033951 Chenopodium quinoa HOM05D004885 ORTHO05D006124 7.0e-59 231.5 271 47.6
MD10G1065000 Malus domestica HOM05D004885 ORTHO05D006124 7.0e-59 231.5 244 53.7
TAR629G2658 Trochodendron aralioides HOM05D004885 ORTHO05D006124 1.6e-58 230.3 212 55.2
HanXRQChr14g0442521 Helianthus annuus HOM05D004885 ORTHO05D006124 2.7e-58 229.6 242 47.9
Potri.005G028900 Populus trichocarpa HOM05D004885 ORTHO05D006124 3.5e-58 229.2 186 62.9
Aqoxy3G00208 Aquilegia oxysepala HOM05D004885 ORTHO05D006124 4.6e-58 228.8 238 49.6
Nitab4.5_0001936g0130 Nicotiana tabacum HOM05D004885 ORTHO05D006124 3.0e-57 226.1 233 49.4
Potri.005G030000 Populus trichocarpa HOM05D004885 ORTHO05D006124 2.5e-56 223.0 186 61.3
MD17G1057100 Malus domestica HOM05D004885 ORTHO05D006124 3.3e-56 222.6 237 51.1
PSO724G1376 Papaver somniferum HOM05D004885 ORTHO05D006124 1.6e-55 220.3 242 50.0
BNapus_Darmor_BZH_scaffold_118p00060 Brassica napus HOM05D001895 ORTHO05D002082 2.1e-55 219.9 232 49.6
Peaxi162Scf01051g00141 Petunia axillaris HOM05D004885 ORTHO05D006124 4.0e-54 215.7 248 46.0
ATR0605G212 Amborella trichopoda HOM05D004885 ORTHO05D006124 8.9e-54 214.5 250 44.4
Nitab4.5_0006177g0010 Nicotiana tabacum HOM05D004885 ORTHO05D006124 1.2e-53 214.2 237 48.1
Cc11_g03220 Coffea canephora HOM05D004885 ORTHO05D006124 3.4e-53 212.6 231 45.0
vmacro18463 Vaccinium macrocarpon HOM05D004885 ORTHO05D006124 4.4e-53 212.2 332 39.8
Rhsim08G0027300 Rhododendron simsii HOM05D004885 ORTHO05D006124 7.5e-53 211.5 229 51.1
PGSC0003DMG401001521 Solanum tuberosum HOM05D004885 ORTHO05D006124 9.8e-53 211.1 236 47.5
QL04p012404 Quercus lobata HOM05D004885 ORTHO05D006124 2.2e-52 209.9 188 58.5
SGA_v2.0_scaffold376G50298 Striga asiatica HOM05D004885 ORTHO05D006124 2.2e-52 209.9 235 46.4
CAN.G1238.6 Capsicum annuum HOM05D004885 ORTHO05D006124 3.7e-52 209.1 235 47.2
Sed0002359 Sechium edule HOM05D004885 ORTHO05D006124 8.3e-52 208.0 213 51.6
PSO386G0181 Papaver somniferum HOM05D004885 ORTHO05D006124 4.1e-51 205.7 226 50.9
Sopen02g027490 Solanum pennellii HOM05D004885 ORTHO05D006124 1.2e-50 204.1 233 45.1
Solyc02g082730.3 Solanum lycopersicum HOM05D004885 ORTHO05D006124 1.7e-49 200.3 235 44.7
CDE06G1258 Ceratophyllum demersum HOM05D004885 ORTHO05D006124 5.6e-48 195.3 244 43.0
CDE08G1303 Ceratophyllum demersum HOM05D004885 ORTHO05D006124 5.6e-48 195.3 245 42.9
Oeu012449.1 Olea europaea HOM05D004885 ORTHO05D006124 1.2e-47 194.1 245 42.0
Ah.14g085190 Amaranthus hybridus HOM05D004885 ORTHO05D006124 1.6e-47 193.7 314 39.8
HPP92_017799 Vanilla planifolia HOM05D004885 ORTHO05D006124 3.6e-47 192.6 240 44.6
MBI01_g31987_MAGBIO Magnolia biondii HOM05D004885 ORTHO05D006124 6.2e-47 191.8 190 53.2
unitig_37.g12359 Utricularia gibba HOM05D004885 ORTHO05D006124 1.6e-42 177.2 245 39.6
Zm00001eb128670 Zea mays HOM05D004885 ORTHO05D006124 1.7e-41 173.7 236 39.8
BcaNung06662 Brassica carinata HOM05D004885 ORTHO05D006124 5.1e-41 172.2 235 43.0
Sc16g0001670 Simmondsia chinensis HOM05D004885 ORTHO05D006124 8.6e-41 171.4 189 47.6
SGA_v2.0_scaffold334G49087 Striga asiatica HOM05D004885 ORTHO05D006124 3.1e-38 162.9 233 38.6
Zm00001eb333020 Zea mays HOM05D004885 ORTHO05D006124 3.1e-38 162.9 242 38.4
Lsat_1_v5_gn_2_73361 Lactuca sativa HOM05D004885 ORTHO05D006124 2.0e-37 160.2 209 43.5
SEGI_12272 Sequoiadendron giganteum HOM05D004885 ORTHO05D006124 8.4e-36 154.8 279 36.2
TPR.G39534 Trifolium pratense HOM05D004885 ORTHO05D006124 3.0e-33 146.4 122 60.7
Nitab4.5_0024681g0010 Nicotiana tabacum HOM05D004885 ORTHO05D006124 3.9e-33 146.0 186 46.2
Prupe.6G331900 Prunus persica HOM05D004885 ORTHO05D006124 5.6e-32 142.1 122 59.8
Psat2g149880 Pisum sativum HOM05D004885 ORTHO05D006124 1.2e-31 141.0 129 49.6
Pp3c12_25630 Physcomitrium patens HOM05D004885 ORTHO05D006124 6.9e-30 135.2 269 31.6
Cc07_g11790 Coffea canephora HOM05D004885 ORTHO05D006124 7.1e-27 125.2 157 42.0
Mapoly0007s0130 Marchantia polymorpha HOM05D004885 ORTHO05D006124 7.1e-27 125.2 262 31.3
QL04p012417 Quercus lobata HOM05D002173 ORTHO05D002189 7.8e-26 121.7 137 45.3
TPR.G39950 Trifolium pratense HOM05D004885 ORTHO05D006124 1.9e-24 117.1 116 49.1
AagrBONN_evm.TU.Sc2ySwM_117.1017 Anthoceros agrestis HOM05D004885 ORTHO05D006124 7.3e-24 115.2 237 32.1
MELO3C001398.2 Cucumis melo HOM05D001254 ORTHO05D006124 1.3e-17 94.4 96 56.2
Nitab4.5_0000702g0180 Nicotiana tabacum HOM05D004607 ORTHO05D005836 2.5e-16 90.1 85 50.6
C05p54650 Brassica napus HOM05D004885 ORTHO05D006124 6.9e-14 82.0 88 52.3
BolC5t34133H Brassica oleracea HOM05D004885 ORTHO05D006124 6.9e-14 82.0 88 52.3
QL04p012412 Quercus lobata HOM05D004885 ORTHO05D006124 4.2e-11 72.8 56 55.4
QL04p013043 Quercus lobata HOM05D004885 ORTHO05D006124 2.1e-10 70.5 55 54.5
ClCG10G000240 Citrullus lanatus HOM05D004885 ORTHO05D006124 6.0e-10 68.9 121 33.9
Sabra05G0083500 Salix brachista HOM05D001516 ORTHO05D001357 1.3e-09 67.8 144 33.3
MELO3C013721.2 Cucumis melo HOM05D004885 ORTHO05D006124 3.0e-09 66.6 55 54.5
PSO210G5901 Papaver somniferum HOM05D004885 ORTHO05D006124 1.5e-08 64.3 203 28.1
Psat0s2561g0120 Pisum sativum HOM05D004885 ORTHO05D006124 1.6e-07 60.8 43 55.8
MELO3C000213.2 Cucumis melo HOM05D004885 ORTHO05D006124 1.1e-06 58.2 66 42.4


User provided reference genes

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