Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc30.25 Carica papaya HOM05D003925 ORTHO05D004832 1.7e-250 869.0 473 100.0
Duzib132G1049 Durio zibethinus HOM05D003925 ORTHO05D004832 6.9e-172 607.8 479 72.0
Duzib052G0643 Durio zibethinus HOM05D003925 ORTHO05D004832 3.8e-170 602.1 470 71.9
COL.COLO4_17737 Corchorus olitorius HOM05D003925 ORTHO05D004832 1.9e-169 599.7 474 68.6
Thecc.02G024000 Theobroma cacao HOM05D003925 ORTHO05D004832 7.2e-169 597.8 493 71.8
Manes.07G023200 Manihot esculenta HOM05D003925 ORTHO05D004832 1.6e-168 596.7 488 70.7
Manes.10G119400 Manihot esculenta HOM05D003925 ORTHO05D004832 7.4e-166 587.8 491 70.1
PGR142G2211 Punica granatum HOM05D003925 ORTHO05D004832 1.4e-164 583.6 484 68.6
Gohir.D01G174000 Gossypium hirsutum HOM05D003925 ORTHO05D004832 3.1e-164 582.4 469 70.6
Dinv19400 Davidia involucrata HOM05D003925 ORTHO05D004832 4.1e-164 582.0 485 67.6
Gorai.002G216100 Gossypium raimondii HOM05D003925 ORTHO05D004832 6.9e-164 581.3 478 70.5
Gohir.D04G176300 Gossypium hirsutum HOM05D003925 ORTHO05D004832 2.6e-163 579.3 475 69.5
Gorai.012G167900 Gossypium raimondii HOM05D003925 ORTHO05D004832 1.3e-162 577.0 478 69.0
Aa31LG4G9470 Aethionema arabicum HOM05D003925 ORTHO05D004832 1.7e-162 576.6 479 66.4
Gohir.A04G132700 Gossypium hirsutum HOM05D003925 ORTHO05D004832 3.8e-162 575.5 475 67.4
CSS0002231 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 1.4e-161 573.5 479 67.2
Hma1.2p1_0884F.1_g232530 Hydrangea macrophylla HOM05D003925 ORTHO05D004832 2.5e-161 572.8 489 69.7
Gohir.A01G182900 Gossypium hirsutum HOM05D003925 ORTHO05D004832 9.4e-161 570.9 473 70.8
Actinidia00183 Actinidia chinensis HOM05D003925 ORTHO05D004832 3.6e-160 568.9 482 66.8
Actinidia39010 Actinidia chinensis HOM05D003925 ORTHO05D004832 6.1e-160 568.2 482 65.6
CARHR231760 Cardamine hirsuta HOM05D003925 ORTHO05D004832 6.7e-159 564.7 473 65.5
Lsat_1_v5_gn_7_76521 Lactuca sativa HOM05D003925 ORTHO05D004832 6.7e-159 564.7 479 64.9
THA.LOC104799820 Tarenaya hassleriana HOM05D003925 ORTHO05D004832 1.5e-158 563.5 477 66.0
Nn1g08458 Nelumbo nucifera HOM05D003925 ORTHO05D004832 9.7e-158 560.8 478 65.1
TWI23G0121 Tripterygium wilfordii HOM05D003925 ORTHO05D004832 9.7e-158 560.8 485 66.8
CAN.G798.55 Capsicum annuum HOM05D003925 ORTHO05D004832 4.8e-157 558.5 479 68.1
Haze_10061 Corylus avellana HOM05D003925 ORTHO05D004832 4.8e-157 558.5 485 64.7
Carub.0007s1672 Capsella rubella HOM05D003925 ORTHO05D004832 1.1e-156 557.4 481 64.7
Thhalv10024818m.g Eutrema salsugineum HOM05D003925 ORTHO05D004832 2.4e-156 556.2 477 65.2
Hund15482 Selenicereus undatus HOM05D003925 ORTHO05D004832 9.1e-156 554.3 460 67.4
Nn5g27797 Nelumbo nucifera HOM05D003925 ORTHO05D004832 1.2e-155 553.9 474 65.2
Prupe.1G577500 Prunus persica HOM05D003925 ORTHO05D004832 3.5e-155 552.4 487 64.9
PGSC0003DMG400024923 Solanum tuberosum HOM05D003925 ORTHO05D004832 3.5e-155 552.4 490 65.3
CiPaw.06G173300 Carya illinoinensis HOM05D003925 ORTHO05D004832 1.3e-154 550.4 477 70.6
TWI14G0879 Tripterygium wilfordii HOM05D003925 ORTHO05D004832 3.8e-154 548.9 492 64.4
MELO3C016507.2 Cucumis melo HOM05D003925 ORTHO05D004832 6.5e-154 548.1 492 67.9
MSTRG.5212 Avicennia marina HOM05D003925 ORTHO05D004832 1.1e-153 547.4 482 64.3
Actinidia06473 Actinidia chinensis HOM05D003925 ORTHO05D004832 2.5e-153 546.2 469 66.5
CANSAT54G0877 Cannabis sativa HOM05D003925 ORTHO05D004832 2.5e-153 546.2 490 62.0
Atru.chr6.812 Acer truncatum HOM05D003925 ORTHO05D004832 1.2e-152 543.9 479 67.8
THA.LOC104800040 Tarenaya hassleriana HOM05D003925 ORTHO05D004832 1.6e-152 543.5 484 68.6
Cfa004507 Carpinus fangiana HOM05D003925 ORTHO05D005835 2.7e-152 542.7 392 76.3
Ciclev10000945m.g Citrus clementina HOM05D003925 ORTHO05D004832 2.7e-152 542.7 486 62.8
Atru.chr6.781 Acer truncatum HOM05D003925 ORTHO05D004832 4.7e-152 542.0 479 67.6
DCAR_006681 Daucus carota HOM05D003925 ORTHO05D004832 4.7e-152 542.0 467 62.7
ClCG10G007000 Citrullus lanatus HOM05D003925 ORTHO05D004832 1.0e-151 540.8 490 66.7
Eucgr.I02754 Eucalyptus grandis HOM05D003925 ORTHO05D004832 4.0e-151 538.9 481 67.6
Dinv07476 Davidia involucrata HOM05D003925 ORTHO05D005835 5.2e-151 538.5 402 71.1
Sc07g0004570 Simmondsia chinensis HOM05D003925 ORTHO05D004832 6.7e-151 538.1 483 63.6
CsaV3_3G006350 Cucumis sativus L. HOM05D003925 ORTHO05D004832 8.8e-151 537.7 493 66.5
AL7G28890 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 2.0e-150 536.6 482 66.4
Nitab4.5_0002596g0090 Nicotiana tabacum HOM05D003925 ORTHO05D004832 3.3e-150 535.8 473 65.3
VMungo0540G0371 Vigna mungo HOM05D003925 ORTHO05D004832 5.7e-150 535.0 472 67.4
MD08G1240800 Malus domestica HOM05D003925 ORTHO05D004832 7.5e-150 534.6 481 63.8
Sp7g22330 Schrenkiella parvula HOM05D003925 ORTHO05D004832 7.5e-150 534.6 474 67.3
Glyma.12G167500 Glycine max HOM05D003925 ORTHO05D004832 1.3e-149 533.9 480 62.5
Lj5C262G4 Lonicera japonica HOM05D003925 ORTHO05D005835 1.7e-149 533.5 454 64.3
Sp6g11590 Schrenkiella parvula HOM05D003925 ORTHO05D004832 1.7e-149 533.5 478 64.2
Phvul.006G218500 Phaseolus vulgaris HOM05D003925 ORTHO05D004832 2.2e-149 533.1 475 63.4
Potri.004G223000 Populus trichocarpa HOM05D003925 ORTHO05D004832 2.2e-149 533.1 483 67.1
Sabra01G0168900 Salix brachista HOM05D003925 ORTHO05D004832 2.2e-149 533.1 471 67.7
Sed0019914 Sechium edule HOM05D003925 ORTHO05D004832 2.2e-149 533.1 479 62.2
MSTRG.16495 Avicennia marina HOM05D003925 ORTHO05D004832 2.8e-149 532.7 481 63.6
Eucgr.L02024 Eucalyptus grandis HOM05D003925 ORTHO05D004832 2.8e-149 532.7 388 77.3
Oeu023407.1 Olea europaea HOM05D003925 ORTHO05D004832 3.7e-149 532.3 483 64.4
Lsat_1_v5_gn_9_121141 Lactuca sativa HOM05D003925 ORTHO05D004832 4.8e-149 531.9 480 62.3
BraA03t11971Z Brassica rapa HOM05D003925 ORTHO05D004832 8.2e-149 531.2 474 66.5
ECA240G1679 Erigeron canadensis HOM05D003925 ORTHO05D004832 1.1e-148 530.8 470 63.0
HanXRQChr06g0181341 Helianthus annuus HOM05D003925 ORTHO05D004832 1.4e-148 530.4 473 65.3
CiPaw.05G005700 Carya illinoinensis HOM05D003925 ORTHO05D004832 1.8e-148 530.0 478 68.0
SGA_v2.0_scaffold42G15910 Striga asiatica HOM05D003925 ORTHO05D004832 2.4e-148 529.6 487 62.6
unitig_26.g9028 Utricularia gibba HOM05D003925 ORTHO05D005835 3.1e-148 529.3 482 63.9
vmacro19868 Vaccinium macrocarpon HOM05D003925 ORTHO05D004832 3.1e-148 529.3 477 66.2
TPR.G2147 Trifolium pratense HOM05D003925 ORTHO05D004832 5.3e-148 528.5 470 61.9
Actinidia26166 Actinidia chinensis HOM05D003925 ORTHO05D004832 7.0e-148 528.1 472 62.5
Medtr2g005930 Medicago truncatula HOM05D003925 ORTHO05D004832 7.0e-148 528.1 471 61.6
Oeu000132.1 Olea europaea HOM05D003925 ORTHO05D004832 9.1e-148 527.7 481 62.0
FAN04G1563 Fragaria x ananassa HOM05D003925 ORTHO05D004832 1.2e-147 527.3 474 63.1
SalBow3G3816 Salvia bowleyana HOM05D003925 ORTHO05D004832 1.2e-147 527.3 480 64.2
Psat1g223280 Pisum sativum HOM05D003925 ORTHO05D004832 2.7e-147 526.2 476 62.2
FvH4_5g28340 Fragaria vesca HOM05D003925 ORTHO05D004832 3.5e-147 525.8 473 62.4
Aqoxy5G03033 Aquilegia oxysepala HOM05D003925 ORTHO05D004832 7.7e-147 524.6 482 62.0
HanXRQChr07g0187361 Helianthus annuus HOM05D003925 ORTHO05D004832 7.7e-147 524.6 473 61.5
TAR381G0375 Trochodendron aralioides HOM05D003925 ORTHO05D004832 7.7e-147 524.6 485 63.3
BraA01t01508Z Brassica rapa HOM05D003925 ORTHO05D004832 2.2e-146 523.1 479 65.6
Nitab4.5_0000948g0030 Nicotiana tabacum HOM05D003925 ORTHO05D004832 2.2e-146 523.1 473 64.1
Rhsim11G0124300 Rhododendron simsii HOM05D003925 ORTHO05D004832 2.9e-146 522.7 485 61.4
Solyc01g103680.3 Solanum lycopersicum HOM05D003925 ORTHO05D004832 2.9e-146 522.7 486 63.8
BolC1t01894H Brassica oleracea HOM05D003925 ORTHO05D004832 3.8e-146 522.3 477 66.0
AT4G24330 Arabidopsis thaliana HOM05D003925 ORTHO05D004832 8.5e-146 521.2 481 65.3
C01p19670 Brassica napus HOM05D003925 ORTHO05D004832 1.9e-145 520.0 477 65.6
QL02p100243 Quercus lobata HOM05D003925 ORTHO05D004832 1.9e-145 520.0 517 59.6
A01p15700 Brassica napus HOM05D003925 ORTHO05D004832 9.4e-145 517.7 477 65.0
BcaC01g04841 Brassica carinata HOM05D003925 ORTHO05D004832 1.6e-144 516.9 454 66.5
AUR62040618 Chenopodium quinoa HOM05D003925 ORTHO05D004832 2.7e-144 516.2 452 63.5
Thhalv10013427m.g Eutrema salsugineum HOM05D003925 ORTHO05D004832 2.7e-144 516.2 484 63.8
Sopen01g046090 Solanum pennellii HOM05D003925 ORTHO05D004832 6.1e-144 515.0 479 63.9
RcHm_v2.0_Chr7g0220701 Rosa chinensis HOM05D003925 ORTHO05D004832 8.0e-144 514.6 474 62.7
Carub.0008s0983 Capsella rubella HOM05D003925 ORTHO05D004832 2.3e-143 513.1 472 64.6
FAN18G2864 Fragaria x ananassa HOM05D003925 ORTHO05D004832 2.3e-143 513.1 487 60.2
Peaxi162Scf00011g00941 Petunia axillaris HOM05D003925 ORTHO05D004832 5.2e-143 511.9 475 63.2
C03p33290 Brassica napus HOM05D003925 ORTHO05D004832 3.4e-142 509.2 473 64.9
BolC3t15651H Brassica oleracea HOM05D003925 ORTHO05D004832 4.4e-142 508.8 473 64.9
Migut.N00826 Erythranthe guttata HOM05D003925 ORTHO05D004832 1.7e-141 506.9 482 61.8
MD15G1434000 Malus domestica HOM05D003925 ORTHO05D004832 6.3e-141 505.0 482 61.2
PSO170G6240 Papaver somniferum HOM05D003925 ORTHO05D004832 1.4e-140 503.8 485 62.5
BcaNung05636 Brassica carinata HOM05D003925 ORTHO05D004832 2.4e-140 503.1 478 63.6
CDE08G0951 Ceratophyllum demersum HOM05D003925 ORTHO05D004832 3.1e-140 502.7 482 59.5
Glyma.16G003600 Glycine max HOM05D003925 ORTHO05D004832 9.1e-140 501.1 476 59.7
C07p53570 Brassica napus HOM05D003925 ORTHO05D004832 1.6e-139 500.4 469 63.5
arahy.Tifrunner.gnm1.ann1.0HG9JC Arachis hypogaea HOM05D003925 ORTHO05D004832 3.5e-139 499.2 474 64.8
Ah.03g136840 Amaranthus hybridus HOM05D003925 ORTHO05D004832 5.9e-139 498.4 469 61.4
A03p27580 Brassica napus HOM05D003925 ORTHO05D004832 1.0e-138 497.7 474 63.3
Lj6g0026503 Lotus japonicus HOM05D003925 ORTHO05D004832 1.0e-138 497.7 471 60.7
Lalb_Chr15g0090731 Lupinus albus HOM05D003925 ORTHO05D004832 1.0e-138 497.7 484 62.4
ATR0584G077 Amborella trichopoda HOM05D003925 ORTHO05D004832 1.3e-138 497.3 461 62.9
AUR62041951 Chenopodium quinoa HOM05D003925 ORTHO05D004832 1.3e-138 497.3 419 65.2
CSS0020156 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 1.7e-138 496.9 413 65.9
A03p55280 Brassica napus HOM05D003925 ORTHO05D004832 6.5e-138 495.0 478 63.4
BolC7t45848H Brassica oleracea HOM05D003925 ORTHO05D004832 8.6e-138 494.6 476 62.0
HanXRQChr16g0509421 Helianthus annuus HOM05D003925 ORTHO05D004832 8.6e-138 494.6 491 58.2
Aa31LG3G6740 Aethionema arabicum HOM05D003925 ORTHO05D004832 1.9e-137 493.4 477 61.0
AT5G49945 Arabidopsis thaliana HOM05D003925 ORTHO05D004832 1.9e-137 493.4 478 62.8
EL10Ac6g14144 Beta vulgaris HOM05D003925 ORTHO05D004832 5.5e-137 491.9 472 59.7
AL8G23900 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 9.5e-137 491.1 494 61.5
PSO782G4904 Papaver somniferum HOM05D003925 ORTHO05D004832 2.1e-136 490.0 485 61.2
arahy.Tifrunner.gnm1.ann1.D6FTCL Arachis hypogaea HOM05D003925 ORTHO05D004832 2.3e-135 486.5 497 61.2
BcaB01g02930 Brassica carinata HOM05D003925 ORTHO05D004832 3.4e-134 482.6 473 63.0
Eucgr.L02026 Eucalyptus grandis HOM05D003925 ORTHO05D004832 4.4e-134 482.3 317 78.9
MBI09_g03430_MAGBIO Magnolia biondii HOM05D003925 ORTHO05D004832 4.4e-134 482.3 481 61.1
BcaC06g32885 Brassica carinata HOM05D003925 ORTHO05D004832 6.3e-133 478.4 454 63.7
SEGI_07809 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 1.3e-130 470.7 483 54.7
CSS0030901 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 2.3e-130 469.9 390 65.9
vmacro01723 Vaccinium macrocarpon HOM05D003925 ORTHO05D004832 3.8e-130 469.2 474 57.8
BraA03t14587Z Brassica rapa HOM05D003925 ORTHO05D004832 5.0e-130 468.8 475 61.3
Ca_00045_v3 Cicer arietinum L. HOM05D003925 ORTHO05D004832 5.0e-130 468.8 456 63.8
CARHR258770 Cardamine hirsuta HOM05D003925 ORTHO05D004832 1.0e-127 461.1 473 60.7
Zm00001eb289240 Zea mays HOM05D003925 ORTHO05D004832 1.5e-126 457.2 480 55.2
Lj9C300G1 Lonicera japonica HOM05D003925 ORTHO05D004832 9.8e-126 454.5 453 57.6
Zm00001eb348650 Zea mays HOM05D003925 ORTHO05D004832 1.8e-124 450.3 387 60.7
HPP92_013757 Vanilla planifolia HOM05D003925 ORTHO05D004832 1.7e-122 443.7 493 55.2
CDE06G0202 Ceratophyllum demersum HOM05D003925 ORTHO05D004832 2.8e-120 436.4 408 59.8
Os05g0432400 Oryza sativa ssp. japonica HOM05D003925 ORTHO05D004832 2.6e-118 429.9 386 64.2
CARHR231750 Cardamine hirsuta HOM05D003925 ORTHO05D004832 7.3e-113 411.8 277 73.6
SGA_v2.0_scaffold8G04435 Striga asiatica HOM05D003925 ORTHO05D004832 1.4e-111 407.5 400 59.5
Mapoly0037s0012 Marchantia polymorpha HOM05D003925 ORTHO05D004832 3.9e-106 389.4 466 50.0
SMO356G0110 Selaginella moellendorffii HOM05D003925 ORTHO05D004832 8.9e-103 378.3 382 54.5
BcaC09g50878 Brassica carinata HOM05D003925 ORTHO05D004832 6.6e-98 362.1 475 52.8
ECA236G3450 Erigeron canadensis HOM05D003925 ORTHO05D004832 6.4e-93 345.5 470 47.0
Pp3c5_6620 Physcomitrium patens HOM05D003925 ORTHO05D004832 7.3e-89 332.0 481 43.5
SEGI_11230 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 3.2e-84 316.6 337 53.4
Cc02_g23030 Coffea canephora HOM05D003925 ORTHO05D004832 3.3e-65 253.4 192 70.3
AagrBONN_evm.TU.Sc2ySwM_362.431 Anthoceros agrestis HOM05D003925 ORTHO05D004832 1.2e-62 245.0 332 44.9
GSVIVG01023266001 Vitis vinifera HOM05D003925 ORTHO05D004832 1.2e-59 235.0 195 76.9
CBR_g4722 Chara braunii HOM05D003925 ORTHO05D004832 3.1e-55 220.3 446 33.9
SHI34757 Sapria himalayana HOM05D003925 ORTHO05D004832 1.1e-49 201.8 191 56.5
BcaC01g04842 Brassica carinata HOM05D003925 ORTHO05D004832 2.9e-45 187.2 328 41.2
CAN.G697.8 Capsicum annuum HOM05D003925 ORTHO05D004832 2.3e-42 177.6 117 71.8
CSS0013131 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 7.4e-41 172.6 137 74.5
CSS0019842 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 2.9e-37 160.6 129 73.6
SEGI_10393 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 8.5e-37 159.1 147 57.1
Migut.B00784 Erythranthe guttata HOM05D003925 ORTHO05D004832 1.9e-36 157.9 129 72.9
Haze_10058 Corylus avellana HOM05D003925 ORTHO05D004832 6.1e-35 152.9 145 63.4
Lalb_Chr20g0123671 Lupinus albus HOM05D003925 ORTHO05D004832 6.1e-35 152.9 99 73.7
Cre02.g106300 Chlamydomonas reinhardtii HOM05D003925 ORTHO05D004832 1.4e-34 151.8 345 33.9
Lj6g0024462 Lotus japonicus HOM05D003925 ORTHO05D004832 3.2e-28 130.6 316 33.5
AL3G33580 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 8.8e-26 122.5 309 33.7
CARHR216310 Cardamine hirsuta HOM05D003925 ORTHO05D004832 1.2e-25 122.1 99 63.6
Zm00001eb254380 Zea mays HOM05D002934 ORTHO05D004560 3.5e-22 110.5 139 44.6
Zm00001eb276420 Zea mays HOM05D002934 ORTHO05D004560 3.5e-22 110.5 139 44.6
MCO13G620 Micromonas commoda HOM05D003925 ORTHO05D004832 1.0e-21 109.0 334 27.5
CAN.G386.33 Capsicum annuum HOM05D003925 ORTHO05D004832 6.8e-18 96.3 70 57.1
CAN.G963.3 Capsicum annuum HOM05D003925 ORTHO05D004832 4.3e-12 77.0 47 72.3
Thecc.02G021600 Theobroma cacao HOM05D003925 ORTHO05D004832 2.0e-09 68.2 53 66.0
BolC8t48574H Brassica oleracea HOM05D003925 ORTHO05D004832 7.5e-09 66.2 109 44.0


User provided reference genes

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